SSDB Paralog Search Result

KEGG ID :smq:SinmeB_1662 (336 a.a.)
Definition:DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01884 (agn,ars,bhz,camu,ccro,cey,deq,edl,ery,leg,lko,lst,metc,meu,mgo,otm,ptv,pyw,ruf,ssch,wma,yak : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
smq:SinmeB_5610 DNA polymerase LigD, ligase domain-cont  K01971     302    1721     398    0.876    290     
smq:SinmeB_4042 DNA ligase D                             K01971     628     738     174    0.393    318     
smq:SinmeB_2574 DNA ligase D                             K01971     865     735     173    0.419    303     
smq:SinmeB_4835 DNA polymerase LigD, polymerase domain-             818     716     169    0.398    304     
smq:SinmeB_4658 ATP dependent DNA ligase                            355     294      73    0.303    320     
smq:SinmeB_2737 ATP dependent DNA ligase                 K10747     537     229      58    0.301    186     
smq:SinmeB_5591 hypothetical protein                                 60     107      30    0.545    33      
smq:SinmeB_5648 oligopeptide/dipeptide ABC transporter              332     100      29    0.322    87      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]