SSDB Paralog Search Result

KEGG ID :smq:SinmeB_2574 (865 a.a.)
Definition:DNA ligase D; K01971 DNA ligase (ATP)
Update status:T01884 (aah,abp,abv,adl,ahd,ahp,ahr,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,tpas,wse,yel,zmr : calculation not yet completed)
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Search Result : 20 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
smq:SinmeB_4835 DNA polymerase LigD, polymerase domain-  K01971     818    2094     483    0.416    863     
smq:SinmeB_4042 DNA ligase D                                        628    1212     282    0.349    639     
smq:SinmeB_1662 DNA polymerase LigD, ligase domain-cont  K01971     336     735     173    0.419    303     
smq:SinmeB_5610 DNA polymerase LigD, ligase domain-cont  K01971     302     600     143    0.396    285     
smq:SinmeB_4658 ATP dependent DNA ligase                 K01971     355     380      92    0.283    346     
smq:SinmeB_2737 ATP dependent DNA ligase                 K01971     537     236      60    0.257    354     
smq:SinmeB_5342 K+-transporting ATPase subunit B (EC:3.  K01547     680     114      32    0.228    439     
smq:SinmeB_3453 hypothetical protein                                298     112      31    0.273    154     
smq:SinmeB_2610 Sel1 domain-containing protein repeat-c  K07126     381     110      31    0.215    358     
smq:SinmeB_1959 hypothetical protein                               1234     107      30    0.259    301     
smq:SinmeB_4016 FG-GAP repeat-containing protein                    775     107      30    0.258    128     
smq:SinmeB_5763 glycosyltransferase                                1303     106      30    0.214    323     
smq:SinmeB_2033 FAD dependent oxidoreductase                        429     105      30    0.238    265     
smq:SinmeB_6026 FAD dependent oxidoreductase             K00313     435     105      30    0.318    88      
smq:SinmeB_6301 GntR family transcriptional regulator               254     102      29    0.251    203     
smq:SinmeB_0765 malonyl CoA-acyl carrier protein transa  K00645     314     101      29    0.264    216     
smq:SinmeB_0205 putative copper resistance-related lipo             480     100      29    0.223    242     
smq:SinmeB_0242 methyl-accepting chemotaxis sensory tra  K03406     533     100      29    0.232    314     
smq:SinmeB_0495 histone deacetylase superfamily protein             309     100      29    0.231    169     
smq:SinmeB_6505 polysaccharide export protein                       594     100      29    0.239    293     

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