SSDB Paralog Search Result

KEGG ID :smq:SinmeB_2574 (865 a.a.)
Definition:DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01884 (ais,ajn,aju,aoa,asol,baab,boe,cann,cdiv,cdk,cpic,eai,ekb,epz,fmr,hai,hali,hda,hja,hlc,ini,ipu,jep,kco,lang,lco,lje,lle,lpd,lvn,mche,nta,ntr,paby,prn,psac,pxl,rbb,sbac,seon,spav,sphn,tfl,var,xfr,xga : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 7 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
smq:SinmeB_4835 DNA polymerase LigD, polymerase domain             818     2094 (    -)     483    0.416    863      -> 
smq:SinmeB_4042 DNA ligase D                            K01971     628     1212 (    -)     282    0.349    639      -> 
smq:SinmeB_1662 DNA polymerase LigD, ligase domain prot K01971     336      735 (    -)     173    0.419    303      -> 
smq:SinmeB_5610 DNA polymerase LigD, ligase domain prot K01971     302      600 (    -)     143    0.396    285      -> 
smq:SinmeB_4658 ATP dependent DNA ligase                           355      380 (    -)      92    0.283    346      -> 
smq:SinmeB_2737 ATP dependent DNA ligase                K10747     537      236 (    -)      60    0.257    354      -> 
smq:SinmeB_6026 FAD dependent oxidoreductase            K00313     435      105 (    -)      30    0.318    88       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]