SSDB Paralog Search Result

KEGG ID :smt:Smal_2960 (535 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T00733 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 26 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
smt:Smal_0026 DNA ligase D                               K01971     825     270      67    0.302    351     
smt:Smal_3022 penicillin-binding protein 1C              K05367     793     125      34    0.243    358     
smt:Smal_1819 Vault protein inter-alpha-trypsin domain-             963     122      34    0.240    388     
smt:Smal_2752 GumN family protein                        K09973     318     114      32    0.249    289     
smt:Smal_0954 RNA polymerase factor sigma-54             K03092     474     111      31    0.270    248     
smt:Smal_2961 DEAD/DEAH box helicase                     K03724     819     110      31    0.245    339     
smt:Smal_3980 hypothetical protein                       K09800    1285     110      31    0.263    255     
smt:Smal_0723 hypothetical protein                                  564     109      31    0.264    330     
smt:Smal_1223 hypothetical protein                                  392     107      30    0.297    158     
smt:Smal_2762 ribonuclease D                             K03684     358     107      30    0.249    337     
smt:Smal_0414 putative ECF subfamily RNA polymerase sig             420     106      30    0.220    381     
smt:Smal_3041 histidine kinase (EC:2.7.13.3)                       1175     106      30    0.263    353     
smt:Smal_0402 beta-lactamase                                        392     105      30    0.245    368     
smt:Smal_0910 DeoR family transcriptional regulator                 258     104      30    0.261    222     
smt:Smal_2333 hypothetical protein                                  427     104      30    0.275    211     
smt:Smal_0129 HemY domain-containing protein             K02498     431     103      29    0.261    329     
smt:Smal_3577 membrane-flanked domain-containing protei  K08981     512     103      29    0.331    121     
smt:Smal_0234 pantothenate kinase                        K03525     243     102      29    0.251    171     
smt:Smal_0357 hypothetical protein                       K07276     321     102      29    0.249    285     
smt:Smal_1825 aldehyde dehydrogenase                     K08324     461     102      29    0.221    421     
smt:Smal_1201 transcription-repair coupling factor       K03723    1154     101      29    0.263    339     
smt:Smal_3803 peptidase M3A and M3B thimet/oligopeptida  K08602     615     101      29    0.303    188     
smt:Smal_1301 two component regulator propeller domain-            1008     100      29    0.262    347     
smt:Smal_3752 helix-turn-helix type 11 domain-containin             235     100      29    0.272    224     
smt:Smal_3758 mechanosensitive ion channel MscS                     809     100      29    0.255    341     
smt:Smal_4015 exodeoxyribonuclease V subunit gamma       K03583    1114     100      29    0.290    162     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]