SSDB Paralog Search Result

KEGG ID :sna:Snas_2814 (358 a.a.)
Definition:ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01194 (abal,aeu,bacp,bacw,bchi,bjp,bmaf,bmai,bmaz,bpsp,bsup,bsuv,bvg,care,cbac,cbv,ccw,cea,cln,clq,clr,cmx,dsw,egr,fgu,fpp,gac,hyd,kpv,kvd,lgq,mear,mfq,mmyi,myc,myr,mys,nbv,panp,pbn,pln,pmic,ppv,pseo,psim,rga,sage,sagg,sagn,smum,sox,sphk,strs,tcb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 11 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sna:Snas_2902 LysR family transcriptional regulator                 321     128      35    0.301    183     
sna:Snas_0677 hypothetical protein                                  430     125      34    0.324    68      
sna:Snas_0508 hypothetical protein                                  759     122      34    0.326    224     
sna:Snas_0559 alanine racemase (EC:5.1.1.1)              K01775     366     122      34    0.310    171     
sna:Snas_2877 alpha-L-rhamnosidase                       K05989     855     117      33    0.302    149     
sna:Snas_3562 beta-lactamase                                        394     107      30    0.339    112     
sna:Snas_1079 xylose isomerase domain-containing protei             266     105      30    0.303    119     
sna:Snas_2576 Fmu (Sun) domain-containing protein        K03500     532     105      30    0.307    88      
sna:Snas_2366 diguanylate cyclase/phosphodiesterase                 693     104      30    0.304    102     
sna:Snas_6163 CoA-binding domain-containing protein                 442     103      29    0.306    147     
sna:Snas_1908 FAD-dependent pyridine nucleotide-disulfi             357     100      29    0.302    139     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]