SSDB Paralog Search Result

KEGG ID :sno:Snov_0819 (842 a.a.)
Definition:DNA ligase D; K01971 DNA ligase (ATP)
Update status:T01258 (abra,amj,apal,bacu,bbrc,bbre,bbrj,bbrn,bbrs,bbrv,bcom,bor,bpg,bpsm,bsc,btj,btq,btz,bze,cmk,cmt,cten,cthr,dav,ecoh,ela,hlr,lmow,lve,maj,maw,mbe,npa,oas,paec,paev,pbi,pes,pfj,pper,pvu,saui,spaa,tmn,vph,xfu : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 44 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
sno:Snov_0068 ATP dependent DNA ligase                   K01971     568     246      62    0.277    386     
sno:Snov_4424 A/G-specific adenine glycosylase           K03575     359     134      36    0.247    344     
sno:Snov_3959 hypothetical protein                       K07042     172     130      35    0.317    142     
sno:Snov_3206 NAD-dependent epimerase/dehydratase        K08679     339     121      33    0.229    175     
sno:Snov_0718 gene transfer agent (GTA)-like protein               1300     117      33    0.271    240     
sno:Snov_2359 hypothetical protein                       K07276     363     116      32    0.219    361     
sno:Snov_3526 alpha/beta hydrolase fold protein                     258     115      32    0.280    214     
sno:Snov_4369 integrase family protein                              434     114      32    0.253    225     
sno:Snov_0933 class III aminotransferase                 K01845     459     109      31    0.297    155     
sno:Snov_1094 organic solvent tolerance protein          K04744     826     109      31    0.243    412     
sno:Snov_4428 chromosome segregation protein SMC         K03529    1150     109      31    0.353    85      
sno:Snov_0815 isocitrate lyase                           K01637     432     108      30    0.275    189     
sno:Snov_3858 metal dependent phosphohydrolase                      990     108      30    0.258    264     
sno:Snov_1065 diguanylate cyclase                                   390     107      30    0.251    327     
sno:Snov_1334 penicillin-binding protein                 K05366     812     107      30    0.236    496     
sno:Snov_3818 import inner membrane translocase subunit             241     107      30    0.397    58      
sno:Snov_0559 family 2 glycosyl transferase                         647     106      30    0.276    221     
sno:Snov_0600 AsmA family protein                        K07289     614     106      30    0.251    502     
sno:Snov_0699 hypothetical protein                                  428     106      30    0.286    140     
sno:Snov_2445 glutathione S-transferase domain-containi             202     106      30    0.302    96      
sno:Snov_0074 Sel1 domain-containing protein repeat-con  K13582    1000     105      30    0.229    424     
sno:Snov_0671 peptidoglycan-binding protein                         225     105      30    0.274    117     
sno:Snov_2516 PAS/PAC and GAF sensor-containing diguany             759     105      30    0.266    214     
sno:Snov_4375 hypothetical protein                                  836     104      30    0.220    699     
sno:Snov_0303 double-strand break repair protein AddB              1013     103      29    0.254    279     
sno:Snov_2921 glycosyltransferase                        K13688    2843     103      29    0.220    400     
sno:Snov_3113 ErfK/YbiS/YcfS/YnhG family protein                    678     103      29    0.256    347     
sno:Snov_3606 family 1 extracellular solute-binding pro  K11069     386     103      29    0.243    230     
sno:Snov_4106 glycerone kinase (EC:2.7.1.29)             K00863     543     103      29    0.226    389     
sno:Snov_0087 class I and II aminotransferase                       402     102      29    0.294    126     
sno:Snov_0944 penicillin-binding protein 1C              K05367     701     102      29    0.265    294     
sno:Snov_2204 hypothetical protein                                  479     102      29    0.293    150     
sno:Snov_2816 Heparinase II/III                                     576     102      29    0.297    111     
sno:Snov_2820 patatin                                               516     102      29    0.272    125     
sno:Snov_3163 pyruvate carboxylase                       K01958    1154     102      29    0.242    281     
sno:Snov_0304 double-strand break repair helicase AddA             1144     101      29    0.236    220     
sno:Snov_0451 carbamoyl-phosphate synthase L chain ATP-  K01965     675     101      29    0.246    362     
sno:Snov_1889 sporulation domain-containing protein                 606     101      29    0.232    336     
sno:Snov_2860 peptidase M24                                         383     101      29    0.269    156     
sno:Snov_0644 amidohydrolase, AtzE family                K02433     469     100      29    0.270    226     
sno:Snov_2591 CheW domain-containing protein                        403     100      29    0.281    224     
sno:Snov_2817 sun protein                                K03500     446     100      29    0.318    85      
sno:Snov_3611 creatininase                               K01470     259     100      29    0.258    163     
sno:Snov_4441 deoxyxylulose-5-phosphate synthase         K01662     640     100      29    0.230    282     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]