SSDB Paralog Search Result

KEGG ID :ssc:100156170 (488 a.a.)
Definition:histone deacetylase 2; K06067 histone deacetylase 1/2
Update status:T01009 (aoa,bfm,bkw,boe,bpdz,bro,brv,bstl,bvc,bvm,cann,capn,cdk,chry,dpy,eai,epz,gai,lak,nao,nta,pfae,ppis,rbb,sfla,shf,spet,splk,tpie,vga,vil,vsh : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 29 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
ssc:100622482 histone deacetylase 1                     K06067     482     2878 (    -)     662    0.859    483      -> 
ssc:100511372 histone deacetylase 3                     K11404     428     1833 (    -)     424    0.588    422      -> 
ssc:100625846 histone deacetylase 8 isoform X1                     417      428 (    -)     103    0.615    96       -> 
ssc:100624050 histone deacetylase 4 isoform X1          K11406    1087      385 (    -)      94    0.306    301      -> 
ssc:100515165 histone deacetylase 5 isoform X1          K11406    1122      382 (    -)      93    0.302    285      -> 
ssc:100621798 histone deacetylase 6 isoform X2          K11407    1117      369 (    -)      90    0.284    292      -> 
ssc:100518786 histone deacetylase 10 isoform X2         K18671     671      321 (    -)      79    0.229    371      -> 
ssc:100515581 histone deacetylase 11 isoform X1         K11418     347      293 (    -)      73    0.257    288      -> 
ssc:100154668 cylicin-2                                            356      169 (    -)      44    0.263    160      -> 
ssc:100623249 high mobility group nucleosome-binding do K17045     312      151 (    -)      40    0.309    136      -> 
ssc:100624465 LOW QUALITY PROTEIN: HIRA-interacting pro            579      135 (    -)      37    0.347    101      -> 
ssc:100152263 acidic leucine-rich nuclear phosphoprotei K18647     261      132 (    -)      36    0.302    96       -> 
ssc:100737210 nucleolin isoform X1                                 724      127 (    -)      35    0.312    125      -> 
ssc:100157937 pre-mRNA-processing factor 40 homolog A   K12821     957      121 (    -)      33    0.303    89       -> 
ssc:100516955 general transcription factor IIF subunit  K03138     517      120 (    -)      33    0.340    103      -> 
ssc:100621314 X-linked retinitis pigmentosa GTPase regu K19607    1229      120 (    -)      33    0.302    96       -> 
ssc:100517429 cell division cycle and apoptosis regulat           1152      117 (    -)      33    0.333    72       -> 
ssc:100622043 LOW QUALITY PROTEIN: HIV Tat-specific fac K13093     759      116 (    -)      32    0.318    110      -> 
ssc:100620890 LOW QUALITY PROTEIN: serrate RNA effector            872      111 (    -)      31    0.302    96       -> 
ssc:100157879 ribosome biogenesis protein BMS1 homolog  K14569    1284      109 (    -)      31    0.306    121      -> 
ssc:100519438 protein FAM133B isoform X1                           247      107 (    -)      30    0.362    69       -> 
ssc:100520783 eukaryotic translation initiation factor  K03243    1219      107 (    -)      30    0.311    103      -> 
ssc:100524395 protein LIAT1                                        235      105 (    -)      30    0.338    74       -> 
ssc:100517918 TFIIH basal transcription factor complex  K10843     782      104 (    -)      30    0.338    65       -> 
ssc:100155989 LOW QUALITY PROTEIN: protein kinase C-bin           1232      103 (    -)      29    0.307    127      -> 
ssc:100156747 LOW QUALITY PROTEIN: ubiquitin-conjugatin K10582     422      103 (    -)      29    0.319    94       -> 
ssc:100153560 ATP-dependent RNA helicase DDX18          K13179     786      101 (    -)      29    0.343    105      -> 
ssc:100462726 bcl-2-associated transcription factor 1   K13087     921      100 (    -)      29    0.309    136      -> 
ssc:100515030 immortalization up-regulated protein                 103      100 (    -)      29    0.340    53       -> 

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