SSDB Paralog Search Result

KEGG ID :ssc:100520434 (923 a.a.)
Definition:DNA ligase 1; K10747 DNA ligase 1
Update status:T01009 (amex,aoa,arq,aru,bcac,bgj,ccun,cfus,cgv,csat,cstr,esj,fcd,gqu,lamy,mbd,mcha,mchc,mmal,mpul,nsy,nto,plak,plan,plim,plk,sino,spat,spsw,tgg,vbo : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 97 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
ssc:100626381 DNA ligase 3                              K10776     995      625 (    -)     148    0.252    745      -> 
ssc:100155891 DNA ligase 4                              K10777     910      472 (    -)     113    0.242    644      -> 
ssc:100156492 LOW QUALITY PROTEIN: neurofilament heavy  K04574    1074      266 (    -)      66    0.268    310      -> 
ssc:100518683 proteoglycan 4 isoform X1                           1651      236 (    -)      60    0.255    286      -> 
ssc:100524640 LOW QUALITY PROTEIN: protein piccolo      K16882    5108      228 (    -)      58    0.257    284      -> 
ssc:100625407 neurofilament medium polypeptide isoform  K04573     934      222 (    -)      56    0.264    276      -> 
ssc:100519519 LOW QUALITY PROTEIN: titin                K12567   34387      219 (    -)      56    0.267    281      -> 
ssc:110260656 LOW QUALITY PROTEIN: histone-lysine N-met K09187    5650      217 (    -)      55    0.277    300      -> 
ssc:100517879 protein ENL isoform X1                    K15187     556      214 (    -)      55    0.263    251      -> 
ssc:100144453 mediator of DNA damage checkpoint protein K20780    2042      211 (    -)      54    0.220    600      -> 
ssc:100521629 serine/arginine repetitive matrix protein K13171     918      209 (    -)      53    0.240    300      -> 
ssc:100621029 LOW QUALITY PROTEIN: uncharacterized prot           1089      204 (    -)      52    0.243    470      -> 
ssc:100516425 treacle protein                           K14562    1371      201 (    -)      52    0.228    667      -> 
ssc:100525449 RNA exonuclease 1 homolog isoform X3      K14570    1211      192 (    -)      50    0.279    269      -> 
ssc:100511011 serine/arginine repetitive matrix protein K13172    2732      190 (    -)      49    0.259    274      -> 
ssc:100154276 LOW QUALITY PROTEIN: fibronectin type III           1905      182 (    -)      47    0.251    350      -> 
ssc:100625427 SH3 domain-containing protein 21 isoform             699      178 (    -)      46    0.265    200      -> 
ssc:100101551 LOW QUALITY PROTEIN: collagen alpha-3(VI) K06238    3105      177 (    -)      46    0.264    258      -> 
ssc:110260887 zinc finger protein 469                             3811      174 (    -)      46    0.250    212      -> 
ssc:733643 nuclear receptor corepressor 2               K06065    2471      174 (    -)      46    0.252    305      -> 
ssc:100623550 ribosomal RNA-processing protein 8        K14850     459      173 (    -)      45    0.263    228      -> 
ssc:100153709 atrophin-1 isoform X1                     K05626    1182      172 (    -)      45    0.252    302      -> 
ssc:100626700 protein phosphatase 1 regulatory subunit  K17457     765      169 (    -)      44    0.251    271      -> 
ssc:100627497 LOW QUALITY PROTEIN: FH2 domain-containin           1094      169 (    -)      44    0.254    260      -> 
ssc:102167376 LOW QUALITY PROTEIN: protein KIAA0556 hom           1612      168 (    -)      44    0.251    414      -> 
ssc:100155983 diacylglycerol kinase kappa               K00901    1266      167 (    -)      44    0.261    211      -> 
ssc:100514855 LOW QUALITY PROTEIN: negative elongation  K15179     532      166 (    -)      44    0.268    280      -> 
ssc:100511265 MAP7 domain-containing protein 1 isoform  K16806     814      165 (    -)      43    0.312    208      -> 
ssc:100521615 rho GTPase-activating protein 17 isoform  K20638     883      165 (    -)      43    0.256    258      -> 
ssc:100625088 LOW QUALITY PROTEIN: 182 kDa tankyrase-1-           1484      165 (    -)      43    0.258    256      -> 
ssc:102165219 ankyrin repeat domain-containing protein             496      165 (    -)      43    0.269    208      -> 
ssc:110256157 LOW QUALITY PROTEIN: myosin XVB           K10361    3011      165 (    -)      43    0.250    200      -> 
ssc:100152372 capZ-interacting protein                  K18615     472      163 (    -)      43    0.250    284      -> 
ssc:110257042 basic proline-rich protein-like                      262      162 (    -)      43    0.281    224      -> 
ssc:110259259 smoothelin-like protein 1                            456      162 (    -)      43    0.283    166      -> 
ssc:100533540 bromodomain-containing protein 4          K11722    1368      160 (    -)      42    0.254    232      -> 
ssc:110257485 LOW QUALITY PROTEIN: death-inducer oblite           2228      160 (    -)      42    0.252    286      -> 
ssc:100154036 MICAL-like protein 1                      K19948     863      159 (    -)      42    0.256    258      -> 
ssc:100511412 rho GTPase-activating protein 31 isoform  K20646    1463      159 (    -)      42    0.269    216      -> 
ssc:100623263 LOW QUALITY PROTEIN: proline-rich protein            366      159 (    -)      42    0.258    341      -> 
ssc:100626052 DNA polymerase delta subunit 3            K03504     465      159 (    -)      42    0.306    173      -> 
ssc:100522667 proline-rich basic protein 1                        1019      157 (    -)      42    0.253    324      -> 
ssc:102165763 LOW QUALITY PROTEIN: myb-related transcri            405      157 (    -)      42    0.269    286      -> 
ssc:100152746 LOW QUALITY PROTEIN: sterile alpha motif             650      156 (    -)      41    0.250    256      -> 
ssc:100329221 peroxisome proliferator-activated recepto K17962    1028      156 (    -)      41    0.253    253      -> 
ssc:100620397 SH3-containing GRB2-like protein 3-intera K20065     858      156 (    -)      41    0.262    244      -> 
ssc:100627742 LOW QUALITY PROTEIN: relA-associated inhi            835      156 (    -)      41    0.250    348      -> 
ssc:100525132 LOW QUALITY PROTEIN: PDZ domain-containin           2819      155 (    -)      41    0.251    243      -> 
ssc:102165932 protein FAM83G                                       812      155 (    -)      41    0.260    273      -> 
ssc:106507907 basic proline-rich protein-like                      224      155 (    -)      41    0.255    200      -> 
ssc:100521754 basic proline-rich protein-like                      345      154 (    -)      41    0.287    237      -> 
ssc:100524137 ankyrin repeat domain-containing protein             573      154 (    -)      41    0.262    317      -> 
ssc:102165279 transcription initiation factor TFIID sub            264      154 (    -)      41    0.286    227      -> 
ssc:100520910 rho GTPase-activating protein 33 isoform  K17933    1287      153 (    -)      41    0.260    335      -> 
ssc:110255470 LOW QUALITY PROTEIN: specifically androge            604      153 (    -)      41    0.258    221      -> 
ssc:110257058 vegetative cell wall protein gp1-like                345      153 (    -)      41    0.284    236      -> 
ssc:396703 protein SON isoform X2                                 2414      153 (    -)      41    0.255    196      -> 
ssc:100515272 LOW QUALITY PROTEIN: nuclear envelope por           1250      152 (    -)      40    0.262    191      -> 
ssc:100522108 brain acid soluble protein 1              K17272     228      152 (    -)      40    0.265    185      -> 
ssc:397676 zonadhesin precursor                                   2476      152 (    -)      40    0.250    272      -> 
ssc:414369 smoothelin                                              912      152 (    -)      40    0.266    173      -> 
ssc:100523750 smoothelin-like protein 2 isoform X3                 449      151 (    -)      40    0.252    314      -> 
ssc:102166828 proline-rich protein 2-like                          262      151 (    -)      40    0.291    237      -> 
ssc:100513802 transforming acidic coiled-coil-containin K14283     740      150 (    -)      40    0.255    208      -> 
ssc:100627019 Abelson tyrosine-protein kinase 2 isoform K08887    1064      150 (    -)      40    0.265    268      -> 
ssc:100525559 LOW QUALITY PROTEIN: pyruvate dehydrogena K13997     500      136 (    -)      37    0.307    176      -> 
ssc:100524302 chromatin assembly factor 1 subunit A     K10750     963      133 (    -)      36    0.320    128      -> 
ssc:106505387 G-protein coupled receptor family C group K04620     654      131 (    -)      36    0.310    116      -> 
ssc:100627043 rap1 GTPase-activating protein 1 isoform  K17700     753      124 (    -)      34    0.303    145      -> 
ssc:100517565 striatin-interacting protein 2 isoform X3            836      121 (    -)      33    0.314    118      -> 
ssc:100511266 calcium-binding tyrosine phosphorylation-            433      120 (    -)      33    0.347    118      -> 
ssc:102164478 polycomb group RING finger protein 6 isof K11470     351      120 (    -)      33    0.300    110      -> 
ssc:100515460 ubiquitin carboxyl-terminal hydrolase 27  K11366     904      116 (    -)      32    0.306    108      -> 
ssc:733675 myocyte-specific enhancer factor 2B          K09261     425      116 (    -)      32    0.337    104      -> 
ssc:100127355 NF-kappa-B essential modulator            K07210     419      113 (    -)      32    0.318    88       -> 
ssc:100512446 nucleolar protein 56                      K14564     596      113 (    -)      32    0.300    140      -> 
ssc:100188903 SWI/SNF-related matrix-associated actin-d K11654    1052      110 (    -)      31    0.301    83       -> 
ssc:100739092 LOW QUALITY PROTEIN: rho guanine nucleoti            869      109 (    -)      31    0.318    129      -> 
ssc:100156875 LOW QUALITY PROTEIN: transmembrane protei            718      108 (    -)      30    0.320    97       -> 
ssc:100514098 sarcalumenin isoform X4                              609      107 (    -)      30    0.314    102      -> 
ssc:100156801 retinoic acid receptor RXR-beta           K08525     532      106 (    -)      30    0.333    75       -> 
ssc:100625962 B-cell CLL/lymphoma 7 protein family memb            202      106 (    -)      30    0.336    107      -> 
ssc:100626060 LOW QUALITY PROTEIN: synapsin-2           K19941     582      106 (    -)      30    0.311    106      -> 
ssc:100510970 LOW QUALITY PROTEIN: coiled-coil and C2 d K19352    1620      105 (    -)      30    0.321    131      -> 
ssc:100522375 uncharacterized protein LOC100522375 isof            158      105 (    -)      30    0.341    85       -> 
ssc:100153846 transcription factor E2F1                 K17454     520      104 (    -)      30    0.310    126      -> 
ssc:100511246 DDB1- and CUL4-associated factor 15 isofo K11791     600      103 (    -)      29    0.304    112      -> 
ssc:100513309 thyrotropin-releasing hormone precursor   K05253     241      103 (    -)      29    0.333    102      -> 
ssc:100515165 histone deacetylase 5 isoform X1          K11406    1122      103 (    -)      29    0.314    102      -> 
ssc:100153414 PHD finger protein 1 isoform X1           K11467     567      102 (    -)      29    0.315    92       -> 
ssc:110255329 uncharacterized protein LOC110255329                 366      102 (    -)      29    0.333    90       -> 
ssc:100523109 palmitoyltransferase ZDHHC9               K16675     364      101 (    -)      29    0.328    58       -> 
ssc:100512652 lysyl oxidase homolog 3 isoform X1        K00280     753      100 (    -)      29    0.303    66       -> 
ssc:100523128 pre-mRNA 3'-end-processing factor FIP1 is K14405     604      100 (    -)      29    0.302    96       -> 
ssc:100524723 glutathione-specific gamma-glutamylcyclot K07232     281      100 (    -)      29    0.306    85       -> 
ssc:102157465 uncharacterized protein LOC102157465                 248      100 (    -)      29    0.400    80       -> 
ssc:102162755 F-box DNA helicase 1 isoform X2           K10300     971      100 (    -)      29    0.326    92       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]