SSDB Paralog Search Result

KEGG ID :ssc:100520434 (923 a.a.)
Definition:DNA ligase 1; K10747 DNA ligase 1
Update status:T01009 (acep,acyg,aoa,bfm,bkw,boe,bpdz,bro,brv,bstl,bvc,bvm,cann,capn,cdk,chry,cio,dnx,dpa,dpy,eai,els,epz,gai,hhg,ipi,kgo,lak,lcf,lhu,mchi,mpsy,nao,ncc,npr,nta,nvl,pds,pfae,pfy,ppis,rbb,sanh,sfla,sfm,sgh,shf,spet,splk,srx,tpie,tut,vga,vil,vsh,xfh : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 81 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
ssc:100626381 DNA ligase 3                              K10776     995      639 (    -)     152    0.258    743      -> 
ssc:100155891 DNA ligase 4                              K10777     910      473 (    -)     114    0.241    643      -> 
ssc:100156492 LOW QUALITY PROTEIN: neurofilament heavy  K04574    1074      263 (    -)      66    0.265    309      -> 
ssc:100524640 LOW QUALITY PROTEIN: protein piccolo      K16882    5108      236 (    -)      60    0.216    542      -> 
ssc:100625407 neurofilament medium polypeptide isoform  K04573     934      227 (    -)      58    0.275    291      -> 
ssc:100521629 serine/arginine repetitive matrix protein K13171     918      210 (    -)      54    0.267    281      -> 
ssc:100516425 treacle protein                           K14562    1371      208 (    -)      53    0.224    665      -> 
ssc:100517879 protein ENL isoform X1                    K15187     556      205 (    -)      53    0.267    251      -> 
ssc:100519172 microtubule-associated protein 4 isoform  K10431    2237      205 (    -)      53    0.220    323      -> 
ssc:100511011 serine/arginine repetitive matrix protein K13172    2732      204 (    -)      52    0.260    273      -> 
ssc:100518683 proteoglycan 4 isoform X1                           1651      203 (    -)      52    0.249    273      -> 
ssc:100621029 LOW QUALITY PROTEIN: uncharacterized prot           1089      202 (    -)      52    0.255    431      -> 
ssc:100525449 RNA exonuclease 1 homolog isoform X3      K14570    1211      199 (    -)      51    0.284    268      -> 
ssc:100525664 synaptojanin-1 isoform X1                 K20279    1618      197 (    -)      51    0.253    261      -> 
ssc:100154276 LOW QUALITY PROTEIN: fibronectin type III           1905      187 (    -)      48    0.251    350      -> 
ssc:100737722 LOW QUALITY PROTEIN: striated muscle pref K08809    3264      183 (    -)      48    0.263    505      -> 
ssc:100520742 LOW QUALITY PROTEIN: histone-lysine N-met K14959    2719      181 (    -)      47    0.251    315      -> 
ssc:100154641 target of Nesh-SH3 isoform X1                       1703      180 (    -)      47    0.254    307      -> 
ssc:733643 nuclear receptor corepressor 2               K06065    2471      180 (    -)      47    0.253    304      -> 
ssc:100625088 LOW QUALITY PROTEIN: 182 kDa tankyrase-1-           1484      177 (    -)      46    0.257    265      -> 
ssc:100533540 bromodomain-containing protein 4          K11722    1368      175 (    -)      46    0.255    231      -> 
ssc:100526102 uncharacterized protein KIAA1211-like hom            963      172 (    -)      45    0.261    276      -> 
ssc:100101551 LOW QUALITY PROTEIN: collagen alpha-3(VI) K06238    3105      171 (    -)      45    0.267    258      -> 
ssc:100623550 ribosomal RNA-processing protein 8        K14850     459      170 (    -)      45    0.256    227      -> 
ssc:100514855 LOW QUALITY PROTEIN: negative elongation  K15179     532      168 (    -)      44    0.275    276      -> 
ssc:100155983 diacylglycerol kinase kappa               K00901    1266      165 (    -)      43    0.265    211      -> 
ssc:100522667 proline-rich basic protein 1                        1019      164 (    -)      43    0.251    323      -> 
ssc:100155509 tau-tubulin kinase 1                      K08815    1305      163 (    -)      43    0.254    279      -> 
ssc:100520910 rho GTPase-activating protein 33 isoform  K17933    1287      162 (    -)      43    0.251    299      -> 
ssc:100511265 MAP7 domain-containing protein 1 isoform  K16806     814      161 (    -)      43    0.308    208      -> 
ssc:102159591 leucine-rich repeat-containing protein 37           1848      161 (    -)      43    0.252    298      -> 
ssc:100515564 neural cell adhesion molecule 1 isoform X K06491     856      159 (    -)      42    0.266    274      -> 
ssc:100626052 DNA polymerase delta subunit 3            K03504     465      159 (    -)      42    0.306    173      -> 
ssc:100511412 rho GTPase-activating protein 31 isoform  K20646    1463      157 (    -)      42    0.266    214      -> 
ssc:100626355 rab-like protein 6                                   713      157 (    -)      42    0.252    294      -> 
ssc:102165932 protein FAM83G                                       812      157 (    -)      42    0.261    272      -> 
ssc:100155350 LOW QUALITY PROTEIN: junctophilin-2                  692      155 (    -)      41    0.266    218      -> 
ssc:100329221 peroxisome proliferator-activated recepto K17962    1028      155 (    -)      41    0.250    252      -> 
ssc:100515946 ataxin-2-like protein isoform X5                    1063      155 (    -)      41    0.250    308      -> 
ssc:100627336 epidermal growth factor receptor kinase s K17277     867      155 (    -)      41    0.255    239      -> 
ssc:102165219 ankyrin repeat domain-containing protein             496      155 (    -)      41    0.268    209      -> 
ssc:102165763 LOW QUALITY PROTEIN: myb-related transcri            405      155 (    -)      41    0.263    285      -> 
ssc:100627019 Abelson tyrosine-protein kinase 2 isoform K08887    1064      154 (    -)      41    0.269    268      -> 
ssc:100512074 lysine-specific demethylase 2B isoform X1 K10276    1311      153 (    -)      41    0.250    276      -> 
ssc:100524137 ankyrin repeat domain-containing protein             573      153 (    -)      41    0.256    317      -> 
ssc:396703 protein SON isoform X2                                 2414      152 (    -)      40    0.255    196      -> 
ssc:414369 smoothelin                                              912      152 (    -)      40    0.266    173      -> 
ssc:100625212 rab11 family-interacting protein 1        K12484     642      151 (    -)      40    0.277    231      -> 
ssc:100520112 FYN-binding protein isoform X4            K17698     822      150 (    -)      40    0.276    272      -> 
ssc:100620397 SH3-containing GRB2-like protein 3-intera K20065     858      145 (    -)      39    0.300    180      -> 
ssc:100524302 chromatin assembly factor 1 subunit A     K10750     963      133 (    -)      36    0.328    128      -> 
ssc:100511266 calcium-binding tyrosine phosphorylation-            433      130 (    -)      35    0.342    117      -> 
ssc:100525687 LOW QUALITY PROTEIN: IQ domain-containing            718      124 (    -)      34    0.309    162      -> 
ssc:100127355 NF-kappa-B essential modulator            K07210     419      122 (    -)      34    0.309    97       -> 
ssc:100523128 pre-mRNA 3'-end-processing factor FIP1 is K14405     604      118 (    -)      33    0.302    126      -> 
ssc:100515460 ubiquitin carboxyl-terminal hydrolase 27  K11366     904      116 (    -)      32    0.306    108      -> 
ssc:100517097 LOW QUALITY PROTEIN: glyceraldehyde-3-pho K10705     404      116 (    -)      32    0.323    93       -> 
ssc:100512446 nucleolar protein 56                      K14564     596      113 (    -)      32    0.300    140      -> 
ssc:100513568 LOW QUALITY PROTEIN: chromatin assembly f K10751     605      113 (    -)      32    0.301    153      -> 
ssc:100521797 LOW QUALITY PROTEIN: glutamate receptor i K05212    1333      113 (    -)      32    0.311    103      -> 
ssc:100124376 helicase SKI2W                            K12599    1246      111 (    -)      31    0.325    114      -> 
ssc:100511246 DDB1- and CUL4-associated factor 15 isofo K11791     600      109 (    -)      31    0.302    116      -> 
ssc:100514098 sarcalumenin isoform X4                              609      109 (    -)      31    0.317    101      -> 
ssc:100156801 retinoic acid receptor RXR-beta           K08525     532      106 (    -)      30    0.333    75       -> 
ssc:100523533 menin isoform X1                          K14970     616      106 (    -)      30    0.300    90       -> 
ssc:100627548 MORC family CW-type zinc finger protein 4            938      106 (    -)      30    0.304    125      -> 
ssc:100152456 potassium channel subfamily K member 9    K04919     374      105 (    -)      30    0.309    97       -> 
ssc:100522375 uncharacterized protein LOC100522375 isof            158      105 (    -)      30    0.341    85       -> 
ssc:100625962 B-cell CLL/lymphoma 7 protein family memb            202      105 (    -)      30    0.318    107      -> 
ssc:100153846 transcription factor E2F1                 K17454     520      104 (    -)      30    0.310    126      -> 
ssc:100188903 SWI/SNF-related matrix-associated actin-d K11654    1052      104 (    -)      30    0.301    83       -> 
ssc:100510970 LOW QUALITY PROTEIN: coiled-coil and C2 d K19352    1620      103 (    -)      29    0.321    131      -> 
ssc:100513309 thyrotropin-releasing hormone precursor   K05253     241      103 (    -)      29    0.333    102      -> 
ssc:100153414 PHD finger protein 1 isoform X1           K11467     567      102 (    -)      29    0.315    92       -> 
ssc:100514773 cytosolic acyl coenzyme A thioester hydro K17360     385      102 (    -)      29    0.469    32       -> 
ssc:100516147 LOW QUALITY PROTEIN: rho guanine nucleoti K20689    2066      102 (    -)      29    0.338    77       -> 
ssc:100520311 LOW QUALITY PROTEIN: zinc finger BED doma           1167      101 (    -)      29    0.305    118      -> 
ssc:100627408 V-set and transmembrane domain-containing            288      101 (    -)      29    0.339    56       -> 
ssc:100512652 lysyl oxidase homolog 3 isoform X1                   753      100 (    -)      29    0.303    66       -> 
ssc:100520920 LOW QUALITY PROTEIN: signal recognition p K03108     667      100 (    -)      29    0.309    110      -> 
ssc:102162755 F-box DNA helicase 1 isoform X2           K10300     971      100 (    -)      29    0.326    92       -> 

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