SSDB Paralog Search Result

KEGG ID :ssx:SACTE_2357 (320 a.a.)
Definition:DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01601 (abat,aoa,bmay,bmec,boe,bpsl,bstg,cann,ccaj,cdk,cell,cfk,cman,csem,cser,cyi,dpa,eai,ecls,els,epz,fox,fvr,glz,keu,lcf,lhu,nai,ndv,nsd,nta,pazo,pcon,psco,pswu,rbb,rbp,rss,snw,sure,tci,tum : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 7 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
ssx:SACTE_5876 ATP dependent DNA ligase                            348      416 (    -)     101    0.346    341      -> 
ssx:SACTE_0610 DNA ligase I, ATP-dependent Dnl1         K10747     511      328 (    -)      81    0.329    331      -> 
ssx:SACTE_0741 amino acid adenylation domain protein              2235      166 (    -)      44    0.296    240      -> 
ssx:SACTE_0427 NAD-dependent epimerase/dehydratase                 347      110 (    -)      31    0.310    200      -> 
ssx:SACTE_2764 Polyprenyl synthetase                    K13787     358      110 (    -)      31    0.336    116      -> 
ssx:SACTE_1274 cobalamin biosynthesis protein CobD      K02227     324      105 (    -)      30    0.307    166      -> 
ssx:SACTE_0876 Fmu (Sun) domain protein                 K03500     477      101 (    -)      29    0.304    158      -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]