SSDB Paralog Search Result

KEGG ID :ssx:SACTE_5876 (348 a.a.)
Definition:ATP dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T01601 (abq,badl,baft,bcar,bcas,bced,bcen,bcib,bdh,bdo,bgs,bhs,bmk,bok,bpv,bsz,bxb,caj,cjc,clh,cnt,coa,dok,eaa,eft,fpc,fpo,fpy,hpak,hpas,hro,kok,lgi,mbj,mbq,mjh,mor,nle,oah,ori,pato,pda,pdu,pge,pmos,prc,psx,rat,rei,sbv,sepp,sequ,sfn,sht,sio,siq,stv,sxl,tpk,umr,vvl,wci,wct,ypq : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 22 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ssx:SACTE_2357 DNA polymerase LigD, ligase domain-conta  K01971     320     416     101    0.346    341     
ssx:SACTE_0610 DNA ligase I, ATP-dependent Dnl1 (EC:6.5  K01971     511     309      76    0.311    347     
ssx:SACTE_0267 serine/threonine protein kinase                      751     129      35    0.245    327     
ssx:SACTE_6106 amino acid adenylation domain-containing            3151     127      35    0.264    318     
ssx:SACTE_0740 amino acid adenylation domain-containing            1849     124      34    0.357    143     
ssx:SACTE_1055 amine oxidase                                        423     122      34    0.299    244     
ssx:SACTE_3449 precorrin-3B C17-methyltransferase        K13540     505     117      33    0.270    248     
ssx:SACTE_6362 hypothetical protein                                 182     113      32    0.277    177     
ssx:SACTE_5581 beta-ketoacyl synthase                              5157     111      31    0.274    285     
ssx:SACTE_2638 hypothetical protein                                 384     110      31    0.251    343     
ssx:SACTE_4930 DEAD/H associated domain-containing prot  K03724    1572     110      31    0.247    259     
ssx:SACTE_5112 metallophosphoesterase                               863     110      31    0.287    195     
ssx:SACTE_5576 beta-ketoacyl synthase                              3603     110      31    0.276    290     
ssx:SACTE_6022 PfkB domain-containing protein            K00874     332     109      31    0.263    198     
ssx:SACTE_6312 amino acid adenylation domain-containing            3321     109      31    0.245    298     
ssx:SACTE_3492 DNA polymerase III subunits gamma and ta  K02343     774     107      30    0.263    217     
ssx:SACTE_4021 peptidase M22 glycoprotease                          212     106      30    0.309    207     
ssx:SACTE_6391 glycine betaine/L-proline ABC transporte  K05847     387     104      30    0.283    265     
ssx:SACTE_4486 hypothetical protein                                 242     103      29    0.266    222     
ssx:SACTE_4524 serine/threonine protein kinase                      849     102      29    0.244    271     
ssx:SACTE_4884 hypothetical protein                                1228     102      29    0.285    239     
ssx:SACTE_2642 molybdenum cofactor synthesis domain-con  K03750     448     101      29    0.304    240     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]