SSDB Paralog Search Result

KEGG ID :svi:Svir_20210 (376 a.a.)
Definition:DNA polymerase LigD-like ligase domain-containing protein; K01971 DNA ligase (ATP)
Update status:T00980 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,hro,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy,umr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
svi:Svir_34920 DNA ligase D/DNA polymerase LigD          K01971     477     866     203    0.466    320     
svi:Svir_27460 UDP-N-acetylmuramoylalanyl-D-glutamate--  K01928     524     117      33    0.263    217     
svi:Svir_06260 N-succinyldiaminopimelate aminotransfera             363     108      30    0.263    205     
svi:Svir_39170 Predicted permease                                   745     108      30    0.303    155     
svi:Svir_20280 transcriptional regulator, TetR family               213     107      30    0.250    216     
svi:Svir_02400 hypothetical protein                                 443     103      29    0.304    158     
svi:Svir_39100 GTPase                                               617     101      29    0.284    183     
svi:Svir_05220 hypothetical protein                                1285     100      29    0.239    188     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]