SSDB Paralog Search Result

KEGG ID :svl:Strvi_0339 (312 a.a.)
Definition:DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01602 (abal,acz,aeu,bacp,bacw,bchi,bjp,bmaf,bmai,bmaz,bpsp,bsup,bsuv,bvg,camr,care,cbac,cbal,cbv,ccw,cea,cis,cll,clm,cln,clq,clr,cmx,cpel,cvo,dsw,egr,fgu,fpp,gac,hyd,kpv,kvd,lgq,mear,mfq,mmyi,myc,myr,mys,nbv,panp,pbn,pln,pmic,ppul,ppv,pseo,psim,pspu,rga,sage,sagg,sagn,smum,sox,sphk,strs,tcb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
svl:Strvi_3580 DNA polymerase LigD, polymerase domain-c             334     571     136    0.375    253     
svl:Strvi_1039 DNA polymerase LigD, polymerase domain-c  K01971     325     459     110    0.344    305     
svl:Strvi_3709 Fis family transcriptional regulator                 609     131      36    0.308    211     
svl:Strvi_7676 short-chain dehydrogenase/reductase SDR              310     107      30    0.325    117     
svl:Strvi_8314 hypothetical protein                                 253     107      30    0.303    155     
svl:Strvi_7889 GTPase ObgE                               K03979     477     106      30    0.305    154     
svl:Strvi_2142 hypothetical protein                                 510     101      29    0.309    139     
svl:Strvi_5509 hypothetical protein                                1316     101      29    0.329    79      
svl:Strvi_8580 acylneuraminate cytidylyltransferase                 399     100      29    0.317    104     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]