SSDB Paralog Search Result

KEGG ID :svl:Strvi_0343 (512 a.a.)
Definition:DNA ligase; K01971 DNA ligase (ATP)
Update status:T01602 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 33 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
svl:Strvi_3581 ATP dependent DNA ligase                  K01971     353     293      73    0.307    352     
svl:Strvi_5345 DNA polymerase LigD, ligase domain-conta  K01971     337     290      72    0.298    309     
svl:Strvi_1040 ATP dependent DNA ligase                  K01971     312     253      64    0.311    299     
svl:Strvi_5695 phosphoenolpyruvate-protein phosphotrans  K08483     556     156      41    0.304    217     
svl:Strvi_3962 beta-ketoacyl synthase                              1660     122      34    0.302    265     
svl:Strvi_4079 2-nitropropane dioxygenase                           352     119      33    0.301    183     
svl:Strvi_7935 hypothetical protein                      K07126     613     119      33    0.307    179     
svl:Strvi_1789 ABC transporter                           K06147     623     117      33    0.304    289     
svl:Strvi_9475 protein-L-isoaspartate(D-aspartate) O-me  K00573     353     115      32    0.317    167     
svl:Strvi_2414 4-diphosphocytidyl-2C-methyl-D-erythrito  K07141     202     111      31    0.321    159     
svl:Strvi_5955 ROK family protein                                   747     111      31    0.310    113     
svl:Strvi_5264 oxidoreductase domain-containing protein             384     110      31    0.305    177     
svl:Strvi_7181 ABC transporter                                      281     109      31    0.349    109     
svl:Strvi_3224 SARP family transcriptional regulator                923     108      30    0.348    138     
svl:Strvi_9060 hypothetical protein                      K02004     847     108      30    0.343    172     
svl:Strvi_1935 signal transduction histidine kinase                 699     107      30    0.352    159     
svl:Strvi_2631 UbiA prenyltransferase                    K03179     465     106      30    0.335    161     
svl:Strvi_2857 beta-ketoacyl synthase                              2000     106      30    0.300    280     
svl:Strvi_6852 chromosome segregation and condensation   K06024     226     106      30    0.310    171     
svl:Strvi_2802 IclR family transcriptional regulator                267     104      30    0.311    135     
svl:Strvi_3068 dihydroorotate dehydrogenase              K00254     366     104      30    0.308    146     
svl:Strvi_6193 hypothetical protein                                 278     104      30    0.304    214     
svl:Strvi_1511 UBA/THIF-type NAD/FAD binding protein                379     103      29    0.303    175     
svl:Strvi_3101 riboflavin biosynthesis protein RibD      K11752     369     103      29    0.300    203     
svl:Strvi_0626 aerial mycelium formation regulatory pro             212     102      29    0.340    150     
svl:Strvi_1876 major facilitator superfamily protein     K08167     572     102      29    0.321    140     
svl:Strvi_4146 hypothetical protein                                 630     102      29    0.302    222     
svl:Strvi_8687 LuxR family two component transcriptiona             233     102      29    0.327    147     
svl:Strvi_4060 LuxR family transcriptional regulator                918     101      29    0.327    248     
svl:Strvi_4591 FAD-dependent pyridine nucleotide-disulf             444     101      29    0.315    197     
svl:Strvi_6873 hypothetical protein                                 454     100      29    0.312    221     
svl:Strvi_7528 EmrB/QacA subfamily drug resistance tran             533     100      29    0.366    82      
svl:Strvi_8075 ABC transporter                           K06148    1372     100      29    0.303    228     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]