SSDB Paralog Search Result

KEGG ID :swi:Swit_3982 (837 a.a.)
Definition:DNA ligase D; K01971 DNA ligase (ATP)
Update status:T00538 (aso,ass,baft,bcor,bmyc,btx,caj,caq,cii,cuv,eaa,eao,ete,fpc,gst,mcr,mjh,mplu,ngg,oah,palk,rat,rbt,sbv,sht,sxy : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 52 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
swi:Swit_5282 DNA ligase D                                          658    2452     565    0.574    624     
swi:Swit_3979 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     532     251      63    0.267    405     
swi:Swit_4343 5-oxoprolinase (EC:3.5.2.9)                K01469    1206     149      40    0.246    447     
swi:Swit_3434 amidohydrolase (EC:3.5.1.32)               K01451     428     125      34    0.273    183     
swi:Swit_2174 hypothetical protein                                  866     123      34    0.249    329     
swi:Swit_1163 penicillin-binding protein 1C              K05367     705     121      33    0.242    433     
swi:Swit_2753 NAD-dependent epimerase/dehydratase                   260     121      33    0.272    265     
swi:Swit_1074 L-threonine aldolase (EC:4.1.2.5)                     356     119      33    0.244    262     
swi:Swit_5270 signal transduction histidine kinase                  559     114      32    0.240    279     
swi:Swit_1301 hypothetical protein                                  989     113      32    0.253    182     
swi:Swit_2790 heat shock protein DnaJ domain-containing             130     113      32    0.305    95      
swi:Swit_2546 peptidase M23B                                        413     112      31    0.243    371     
swi:Swit_4548 asparagine synthase                        K01953     751     112      31    0.269    283     
swi:Swit_1285 sigma-54 dependent trancsriptional regula  K10943     425     111      31    0.243    432     
swi:Swit_4390 hypothetical protein                                  444     111      31    0.242    360     
swi:Swit_3449 ATP-dependent helicase HrpB                K03579     814     110      31    0.247    231     
swi:Swit_4070 hemolysin-type calcium-binding protein                385     110      31    0.265    332     
swi:Swit_4479 hypothetical protein                                 1057     110      31    0.232    431     
swi:Swit_0796 hypothetical protein                                  492     109      31    0.231    503     
swi:Swit_0828 3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1  K07516     678     108      30    0.319    163     
swi:Swit_0055 DNA polymerase III subunits gamma and tau  K02343     582     107      30    0.224    548     
swi:Swit_2680 double-strand break repair protein AddB               991     107      30    0.231    546     
swi:Swit_2922 amidohydrolase                                        511     106      30    0.239    356     
swi:Swit_3544 type 11 methyltransferase                             247     106      30    0.252    258     
swi:Swit_4009 group 1 glycosyl transferase                         1386     106      30    0.238    597     
swi:Swit_0124 hypothetical protein                       K02004     831     105      30    0.242    599     
swi:Swit_3939 sporulation domain-containing protein                 483     105      30    0.255    271     
swi:Swit_0345 acetyl-CoA acetyltransferase (EC:2.3.1.16  K00626     392     104      30    0.273    205     
swi:Swit_0542 cytochrome c biogenesis transmembrane pro             686     104      30    0.244    312     
swi:Swit_3623 short chain dehydrogenase                             280     104      30    0.284    155     
swi:Swit_3884 branched-chain alpha-keto acid dehydrogen  K11381     735     104      30    0.231    364     
swi:Swit_4822 hypothetical protein                                  474     104      30    0.299    134     
swi:Swit_0068 response regulator receiver modulated Che  K03412     368     103      29    0.263    167     
swi:Swit_0792 DegT/DnrJ/EryC1/StrS aminotransferase                 370     103      29    0.269    197     
swi:Swit_1086 peptidase M24                              K01262     601     103      29    0.216    403     
swi:Swit_1316 diguanylate cyclase                                  1004     103      29    0.236    554     
swi:Swit_4506 hypothetical protein                                  310     103      29    0.301    143     
swi:Swit_5328 hypothetical protein                                 1155     103      29    0.242    302     
swi:Swit_0098 leucyl aminopeptidase (EC:3.4.11.1)        K01255     465     102      29    0.277    256     
swi:Swit_0686 beta-lactamase domain-containing protein              597     102      29    0.262    271     
swi:Swit_1143 RND efflux system outer membrane lipoprot             488     102      29    0.257    241     
swi:Swit_2959 FAD-dependent pyridine nucleotide-disulfi  K03885     411     102      29    0.247    430     
swi:Swit_3789 GTP cyclohydrolase II (EC:3.5.4.25)        K01497     353     102      29    0.278    144     
swi:Swit_4853 metallophosphoesterase                                430     102      29    0.201    319     
swi:Swit_0225 hypothetical protein                                  723     101      29    0.254    339     
swi:Swit_0781 branched-chain alpha-keto acid dehydrogen  K00167     337     101      29    0.245    245     
swi:Swit_1503 autotransporter beta-domain-containing pr            1069     101      29    0.312    125     
swi:Swit_1630 hypothetical protein                                  276     100      29    0.408    71      
swi:Swit_2396 amidohydrolase 3                           K07047     565     100      29    0.255    377     
swi:Swit_3311 alpha/beta hydrolase fold protein                     351     100      29    0.264    201     
swi:Swit_4179 TonB-dependent receptor                               782     100      29    0.280    175     
swi:Swit_4730 alpha/beta hydrolase domain-containing pr             288     100      29    0.251    275     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]