SSDB Paralog Search Result

KEGG ID :tbd:Tbd_0812 (306 a.a.)
Definition:DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T00275 (abq,badl,baft,bcar,bced,bcib,bdh,bdo,bgs,bmk,bok,bpv,bsz,bxb,caj,cjc,clh,cnt,coa,dok,eaa,eft,fpc,fpo,fpy,hpas,hro,kok,lgi,mbj,mbq,mjh,mor,nle,oah,ori,pato,pda,pdu,pge,pmos,prc,psx,rat,sbv,sepp,sfn,sht,sio,siq,stv,tpk,umr,vvl,wci,wct : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 10 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
tbd:Tbd_2247 ATP-dependent DNA ligase (EC:6.5.1.1)       K01971     846     212      54    0.314    264     
tbd:Tbd_0355 filamentous hemagglutinin                             3472     119      33    0.255    247     
tbd:Tbd_2232 membrane-bound lytic murein transglycosyla  K08304     400     116      32    0.245    253     
tbd:Tbd_0834 signal peptide protein                      K09800    1243     107      30    0.271    280     
tbd:Tbd_0293 group 1 glycosyl transferase                           406     104      30    0.245    249     
tbd:Tbd_0384 TPR repeat-containing protein                          592     103      29    0.241    191     
tbd:Tbd_2681 transcriptional regulator                   K03655     634     103      29    0.293    167     
tbd:Tbd_1335 CzcC family heavy metal RND efflux outer m             429     101      29    0.265    185     
tbd:Tbd_0491 transmembrane protein                       K07403     446     100      29    0.292    168     
tbd:Tbd_0828 DNA polymerase III subunit alpha (EC:2.7.7  K14162    1023     100      29    0.287    195     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]