SSDB Paralog Search Result

KEGG ID :tgu:100225693 (911 a.a.)
Definition:ligase IV, DNA, ATP-dependent; K10777 DNA ligase 4
Update status:T01082 (acan,actn,ast,baci,btd,cpas,dfa,dgi,fve,hdt,hhm,hpyi,hpym,hpyr,hpyu,koe,lad,loa,lph,lpo,mao,mro,mtuc,mtue,mtuh,sagl,sent,sfi,sly,soi,tmm,tpb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 55 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
tgu:100220473 ligase III, DNA, ATP-dependent             K10776     896     582     139    0.273    620     
tgu:100232080 RNA guanylyltransferase and 5'-phosphatas  K13917     600     148      40    0.241    232     
tgu:100224030 ArfGAP with SH3 domain, ankyrin repeat an  K12488    1399     127      35    0.218    357     
tgu:100219932 spectrin repeat containing, nuclear envel            8749     118      33    0.224    331     
tgu:100224649 breast cancer 1, early onset               K10605    1803     117      33    0.250    116     
tgu:100224506 topoisomerase (DNA) II binding protein 1   K10728    1521     115      32    0.262    103     
tgu:100226784 spectrin, beta, non-erythrocytic 5         K06115    3800     114      32    0.222    478     
tgu:100225781 ubiquitin protein ligase E3 component n-r  K10626    1751     113      32    0.219    343     
tgu:100221910 RAD50 homolog (S. cerevisiae)              K10866    1312     112      31    0.217    313     
tgu:100221127 Rho-associated, coiled-coil containing pr  K04514    1368     111      31    0.194    408     
tgu:100221850 TBC1 domain family member 12-like                     737     110      31    0.266    188     
tgu:100230432 mitogen-activated protein kinase-activate  K04442     471     110      31    0.246    211     
tgu:100218177 exocyst complex component 5                           707     109      31    0.219    406     
tgu:100224403 nucleoporin like 1                         K14307     600     109      31    0.214    280     
tgu:100226880 structural maintenance of chromosomes 4    K06675    1522     109      31    0.208    245     
tgu:100230044 BEN domain containing 3                               842     109      31    0.214    384     
tgu:100230395 retinoblastoma-like 2 (p130)               K16332    1200     109      31    0.227    375     
tgu:100219738 Tax1 (human T-cell leukemia virus type I)             816     108      30    0.201    313     
tgu:100220478 gap junction protein, alpha 5, 40kDa       K07614     370     107      30    0.229    201     
tgu:100228660 neurexin 1                                 K07377    1503     107      30    0.280    157     
tgu:100220052 thyroid hormone receptor interactor 11               1946     106      30    0.212    297     
tgu:100227395 CREB binding protein                       K04498    2361     106      30    0.198    298     
tgu:100230839 dynein, axonemal, heavy chain 3            K10408    4002     106      30    0.195    558     
tgu:100226878 serine/threonine kinase 32C                K08793     419     105      30    0.244    160     
tgu:100222594 Sp4 transcription factor                   K09194     770     104      30    0.202    257     
tgu:100218618 progesterone immunomodulatory binding fac  K16538     760     103      29    0.220    186     
tgu:100226301 early endosome antigen 1                   K12478    1408     103      29    0.186    398     
tgu:100231872 FAT tumor suppressor homolog 1 (Drosophil  K16506    4576     103      29    0.212    184     
tgu:100217606 UFM1-specific ligase 1                                792     102      29    0.201    443     
tgu:100218727 RAD50 interactor 1                                    767     102      29    0.211    303     
tgu:100220022 ubiquitin protein ligase E3 component n-r  K10625    1749     102      29    0.193    538     
tgu:100220320 Myb-like, SWIRM and MPN domains 1          K11865     828     102      29    0.274    146     
tgu:100222361 retinoic acid induced 14                             1018     102      29    0.224    290     
tgu:100222890 xanthine dehydrogenase                     K00106    1357     102      29    0.193    171     
tgu:100223811 NOP2/Sun RNA methyltransferase family, me  K15335     753     102      29    0.220    232     
tgu:100224483 rogdi homolog (Drosophila)                            286     102      29    0.221    208     
tgu:100226466 consortin, connexin sorting protein                   719     102      29    0.253    87      
tgu:100229141 CCR4-NOT transcription complex, subunit 4  K10643     762     102      29    0.198    243     
tgu:100230210 myosin, heavy chain 11, smooth muscle      K10352    1980     102      29    0.226    266     
tgu:100231489 death-associated protein kinase 1          K08803    1430     102      29    0.201    184     
tgu:100219613 gap junction protein, alpha 10, 62kDa      K07631     305     101      29    0.190    174     
tgu:100222492 CDK2-associated, cullin domain 1                      330     101      29    0.260    227     
tgu:100222763 gap junction protein, alpha 9, 59kDa       K07618     553     101      29    0.216    171     
tgu:100223542 class II, major histocompatibility comple  K08060     841     101      29    0.275    102     
tgu:100226173 FAT tumor suppressor homolog 2 (Drosophil  K16506    4428     101      29    0.237    304     
tgu:100227200 LIM and cysteine-rich domains protein 1-l             348     101      29    0.230    135     
tgu:100231437 dynein, axonemal, heavy chain 5                      4608     101      29    0.208    279     
tgu:100231624 dedicator of cytokinesis 2                 K12367    1834     101      29    0.197    300     
tgu:101232831 death-associated protein kinase 3          K08803     452     101      29    0.216    278     
tgu:100219964 tudor domain containing 1                             767     100      29    0.242    165     
tgu:100221244 TNF receptor-associated factor 7, E3 ubiq  K10646     706     100      29    0.182    303     
tgu:100225013 integrator complex subunit 8               K13145     995     100      29    0.209    296     
tgu:100227796 PRP40 pre-mRNA processing factor 40 homol  K12821     785     100      29    0.216    125     
tgu:100228499 cathepsin E                                K01382     435     100      29    0.224    263     
tgu:100229715 zinc finger homeobox 4                     K09380    3535     100      29    0.222    216
[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]