SSDB Paralog Search Result

KEGG ID :tmb:Thimo_3339 (464 a.a.)
Definition:ribulose 1,5-bisphosphate carboxylase, large subunit; K01601 ribulose-bisphosphate carboxylase large chain
Update status:T02397 (aah,aal,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,bvt,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctes,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mcs,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,slv,ssuy,tap,tcm,tms,tpas,vir,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 7 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
tmb:Thimo_0765 ribulose 1,5-bisphosphate carboxylase, l  K01601     472     619     147    0.320    447     
tmb:Thimo_2947 ribulose 1,5-bisphosphate carboxylase, l  K01601     471     579     138    0.306    447     
tmb:Thimo_0884 ribulose 1,5-bisphosphate carboxylase, l  K01601     435     390      95    0.280    450     
tmb:Thimo_2808 ribulose 1,5-bisphosphate carboxylase, l  K01601     384     243      61    0.252    330     
tmb:Thimo_0110 Zn-dependent protease                                504     101      29    0.257    109     
tmb:Thimo_1753 RHS repeat-associated core domain-contai            1392     101      29    0.241    282     
tmb:Thimo_0605 hypothetical protein                                1846     100      29    0.217    180     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]