SSDB Paralog Search Result

KEGG ID :tpr:Tpau_3810 (539 a.a.)
Definition:ATP-dependent DNA ligase I; K01971 DNA ligase (ATP)
Update status:T01228 (babr,banh,bcef,blx,blz,bmee,bmp,bpsh,brp,bsg,bsul,bsut,bsw,bthm,bthr,btv,but,bww,cbz,cdo,cjv,cmg,cmm,cun,cuq,cus,cuz,eclg,fpq,fpu,frf,hav,hia,hir,kpb,kpt,kpx,lia,lii,lio,llx,mavd,mde,mfc,mgj,mhom,mie,msb,msh,msn,mus,nmx,npn,nte,pcv,ppnm,ppud,pstt,pxb,sagt,smer,stax,syj,teu,tki,trm,vcq,vcy,vda,vtu : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 24 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
tpr:Tpau_0201 DNA polymerase LigD, polymerase domain-co  K01971     778     352      86    0.299    311     
tpr:Tpau_4039 ATP dependent DNA ligase                   K01971     342     314      77    0.307    326     
tpr:Tpau_3922 hypothetical protein                                 2382     165      43    0.277    329     
tpr:Tpau_1893 protoporphyrinogen oxidase (EC:1.3.3.4)    K00231     421     128      35    0.303    218     
tpr:Tpau_2451 MerR family transcriptional regulator                 339     118      33    0.303    261     
tpr:Tpau_0507 ABC transporter                                       549     115      32    0.324    182     
tpr:Tpau_0134 hypothetical protein                                  298     114      32    0.312    247     
tpr:Tpau_1745 cytosine/purines uracil thiamine allantoi             491     111      31    0.303    142     
tpr:Tpau_1829 hypothetical protein                                  353     111      31    0.314    207     
tpr:Tpau_1862 acyl-CoA dehydrogenase domain-containing              361     110      31    0.348    115     
tpr:Tpau_1642 Mg chelatase subunit ChlI                  K07391     506     109      31    0.311    167     
tpr:Tpau_3322 TetR family transcriptional regulator                 206     109      31    0.312    160     
tpr:Tpau_4320 amino acid adenylation domain protein      K04789    1653     108      30    0.305    210     
tpr:Tpau_0089 major facilitator superfamily protein                 408     107      30    0.321    159     
tpr:Tpau_1776 damage inducible protein CinA              K03743     163     107      30    0.343    175     
tpr:Tpau_1220 major facilitator superfamily protein                 377     105      30    0.301    186     
tpr:Tpau_4329 daunorubicin resistance ABC transporter A  K01990     313     105      30    0.309    152     
tpr:Tpau_0863 peptidase S8 and S53 subtilisin kexin sed  K14743     428     104      30    0.305    233     
tpr:Tpau_0185 1-phosphofructokinase                      K00882     323     103      29    0.300    233     
tpr:Tpau_0354 LuxR family transcriptional regulator                 222     103      29    0.309    139     
tpr:Tpau_2296 exodeoxyribonuclease V subunit gamma (EC:  K03583    1103     102      29    0.354    113     
tpr:Tpau_2883 alcohol dehydrogenase zinc-binding domain  K00121     383     101      29    0.308    195     
tpr:Tpau_3337 aldehyde dehydrogenase                     K00135     487     100      29    0.316    158     
tpr:Tpau_4081 hypothetical protein                                  233     100      29    0.396    101     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]