SSDB Paralog Search Result

KEGG ID :tsp:Tsp_08614 (359 a.a.)
Definition:histone deacetylase 2; K11418 histone deacetylase 11
Update status:T01609 (agn,ars,bhz,camu,ccro,cey,deq,edl,ery,leg,lko,lst,metc,meu,mgo,otm,ptv,pyw,ruf,ssch,wma,yak : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
tsp:Tsp_10252 putative histone deacetylase family prote  K06067     441     341      84    0.255    325     
tsp:Tsp_11412 histone deacetylase Rpd3 protein           K06067     459     332      82    0.276    290     
tsp:Tsp_11745 histone deacetylase 1                      K06067     363     304      75    0.248    319     
tsp:Tsp_09994 putative histone deacetylase family prote  K04429    2075     291      72    0.260    281     
tsp:Tsp_11147 histone deacetylase 1                      K06067     584     283      70    0.261    284     
tsp:Tsp_08143 histone deacetylase 2                      K06067     558     260      65    0.292    195     
tsp:Tsp_07527 histone deacetylase 3                      K11404     409     221      56    0.275    182     
tsp:Tsp_06794 histone deacetylase family protein                    900     204      52    0.240    288     
tsp:Tsp_12528 putative histone deacetylase family prote  K11404     268     173      45    0.267    165     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]