SSDB Paralog Search Result

KEGG ID :tsp:Tsp_08614 (359 a.a.)
Definition:histone deacetylase 2; K11418 histone deacetylase 11
Update status:T01609 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
tsp:Tsp_10252 putative histone deacetylase family prote  K06067     441     341      84    0.255    325     
tsp:Tsp_11412 histone deacetylase Rpd3 protein           K06067     459     332      82    0.276    290     
tsp:Tsp_11745 histone deacetylase 1                      K06067     363     304      75    0.248    319     
tsp:Tsp_09994 putative histone deacetylase family prote  K04429    2075     291      72    0.260    281     
tsp:Tsp_11147 histone deacetylase 1                      K06067     584     283      70    0.261    284     
tsp:Tsp_08143 histone deacetylase 2                      K06067     558     260      65    0.292    195     
tsp:Tsp_07527 histone deacetylase 3                      K11404     409     221      56    0.275    182     
tsp:Tsp_06794 histone deacetylase family protein         K11407     900     204      52    0.240    288     
tsp:Tsp_04010 putative histone deacetylase 4             K11406     784     183      48    0.243    276     
tsp:Tsp_12528 putative histone deacetylase family prote  K11404     268     173      45    0.267    165     
tsp:Tsp_06232 arginine kinase                                       408     103      29    0.243    136     
tsp:Tsp_06356 hypothetical protein                       K02434     519     102      29    0.226    115     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]