SSDB Paralog Search Result

KEGG ID :vma:VAB18032_06520 (304 a.a.)
Definition:DNA polymerase ligd, polymerase domain-containing protein; K01971 DNA ligase (ATP)
Update status:T01471 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 11 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
vma:VAB18032_12780 DNA primase, small subunit            K01971     341     496     119    0.332    298     
vma:VAB18032_23715 DNA primase small subunit             K01971     323     465     112    0.309    324     
vma:VAB18032_29756 DNA polymerase LigD polymerase subun             321     451     109    0.327    297     
vma:VAB18032_26821 UDP-N-acetylmuramyl tripeptide synth  K01928     497     113      32    0.259    216     
vma:VAB18032_04200 uvrd/rep helicase                               1064     111      31    0.246    276     
vma:VAB18032_17095 modular polyketide synthase                     2721     107      30    0.259    247     
vma:VAB18032_17080 diaminobutyrate-pyruvate aminotransf             519     103      29    0.276    134     
vma:VAB18032_25120 ATP-binding protein                              834     102      29    0.423    52      
vma:VAB18032_14515 elongation factor G                   K02355     716     100      29    0.265    181     
vma:VAB18032_24630 serine-type D-Ala-D-Ala carboxypepti  K01286     394     100      29    0.266    139     
vma:VAB18032_26981 serine/threonine protein kinase with  K08884     662     100      29    0.224    245     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]