SSDB Paralog Search Result

KEGG ID :vma:VAB18032_12830 (385 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T01471 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,hro,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy,umr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 26 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
vma:VAB18032_06515 DNA polymerase LigD ligase subunit    K01971     302     384      93    0.324    324     
vma:VAB18032_28881 ATP-dependent DNA ligase (EC:6.5.1.1  K01971     538     301      74    0.298    389     
vma:VAB18032_07665 ATP dependent DNA ligase                         253     255      64    0.276    214     
vma:VAB18032_10310 DNA ligase D                          K01971     348     237      60    0.310    216     
vma:VAB18032_27871 regulatory protein LuxR               K03556     925     132      36    0.255    329     
vma:VAB18032_27526 NAD+ synthetase                       K01950     588     128      35    0.247    288     
vma:VAB18032_25020 hypothetical protein                             548     114      32    0.300    150     
vma:VAB18032_14685 TetR family transcriptional regulato             199     111      31    0.225    204     
vma:VAB18032_06115 NADH dehydrogenase subunit C (EC:1.6  K00332     243     109      31    0.276    217     
vma:VAB18032_23115 hypothetical protein                             213     108      30    0.306    193     
vma:VAB18032_00865 nitrite reductase (NAD(P)H) large su  K00362     840     106      30    0.277    166     
vma:VAB18032_16455 FkbH-like protein                                622     105      30    0.261    333     
vma:VAB18032_19010 non-ribosomal peptide synthetase                1023     105      30    0.307    163     
vma:VAB18032_07585 hypothetical protein                             345     104      30    0.270    115     
vma:VAB18032_13800 CDP-glycerol:poly(glycerophosphate)              377     104      30    0.230    248     
vma:VAB18032_17320 3-demethylubiquinone-9 3-methyltrans             247     104      30    0.301    196     
vma:VAB18032_18385 putative NRPS-type-I PKS fusion prot            3904     104      30    0.313    131     
vma:VAB18032_21315 hypothetical protein                            1314     104      30    0.253    316     
vma:VAB18032_02845 cell division protein FtsK/SpoIIIE               851     103      29    0.265    294     
vma:VAB18032_26666 transcriptional regulator                        476     103      29    0.238    202     
vma:VAB18032_04195 metallophosphoesterase                K07098     452     102      29    0.256    313     
vma:VAB18032_12805 hypothetical protein                             241     102      29    0.301    93      
vma:VAB18032_23365 sulfatase                                        677     100      29    0.223    336     
vma:VAB18032_29316 exopolysaccharide biosynthesis polyp             462     100      29    0.293    99      
vma:VAB18032_29741 serine/threonine protein kinase                  460     100      29    0.289    114     
vma:VAB18032_30329 hypothetical protein                             488     100      29    0.309    178     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]