SSDB Paralog Search Result

KEGG ID :vpe:Varpa_0532 (869 a.a.)
Definition:DNA ligase d; K01971 DNA ligase (ATP)
Update status:T01392 (aso,ass,baft,bcor,bmyc,btx,caj,caq,cii,cuv,eaa,eao,ete,fpc,gst,mcr,mjh,mplu,ngg,oah,palk,rat,rbt,sbv,sht,sxy : calculation not yet completed)
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Search Result : 29 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
vpe:Varpa_2796 DNA ligase d                              K01971     854    3034     697    0.546    865     
vpe:Varpa_2997 ATP dependent DNA ligase                  K01971     366     307      76    0.285    355     
vpe:Varpa_5498 ATP dependent DNA ligase                  K01971     551     238      60    0.273    311     
vpe:Varpa_2840 ATP dependent DNA ligase                  K01971     284     177      46    0.310    258     
vpe:Varpa_3838 ATP dependent DNA ligase                             655     136      37    0.242    289     
vpe:Varpa_3952 swib/mdm2 domain-containing protein                  148     123      34    0.519    54      
vpe:Varpa_4832 type IV-a pilus assembly ATPase pilb      K02652     577     121      33    0.257    370     
vpe:Varpa_1011 histone h1/h5 family protein, hct subfam             177     119      33    0.508    59      
vpe:Varpa_2026 hypothetical protein                                3106     118      33    0.247    336     
vpe:Varpa_5465 acyltransferase, ws/dgat/mgat                        572     117      33    0.421    76      
vpe:Varpa_3225 chromosome segregation protein smc        K03529    1171     116      32    0.239    180     
vpe:Varpa_2665 tRNA u-34 5-methylaminomethyL-2-thiourid  K15461     612     113      32    0.250    328     
vpe:Varpa_3991 hypothetical protein                      K02004     869     112      31    0.266    139     
vpe:Varpa_4969 peptidoglycan-binding lysin domain                  6514     112      31    0.220    692     
vpe:Varpa_5597 translation elongation factor g           K02355     699     112      31    0.261    161     
vpe:Varpa_3394 malonyL-CoA decarboxylase (EC:4.1.1.9)    K01578     488     111      31    0.266    124     
vpe:Varpa_3775 alpha/beta hydrolase fold protein         K00433     337     109      31    0.274    146     
vpe:Varpa_1038 hypothetical protein                                 370     108      30    0.328    116     
vpe:Varpa_0045 hypothetical protein                                 609     106      30    0.204    499     
vpe:Varpa_0452 polysaccharide deacetylase                           307     106      30    0.265    200     
vpe:Varpa_0959 diaminopimelate epimerase                 K01778     300     106      30    0.330    91      
vpe:Varpa_1563 fimv n-terminal domain                    K08086     924     106      30    0.250    140     
vpe:Varpa_5876 (glutamate--ammonia-ligase) adenylyltran  K00982     934     106      30    0.229    406     
vpe:Varpa_0496 hypothetical protein                                 637     103      29    0.254    173     
vpe:Varpa_0977 UDP-N-acetylmuramoylalanine/D-glutamate   K01925     735     102      29    0.264    129     
vpe:Varpa_3883 TRAP dicarboxylate transporter subunit D             342     101      29    0.268    127     
vpe:Varpa_3904 CoA-binding domain-containing protein                706     100      29    0.197    350     
vpe:Varpa_5147 erfk/ybis/ycfs/ynhg family protein                   508     100      29    0.256    238     
vpe:Varpa_5179 hypothetical protein                      K09800    1361     100      29    0.236    276     

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