SSDB Paralog Search Result

KEGG ID :vpe:Varpa_2997 (366 a.a.)
Definition:ATP dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T01392 (abq,badl,baft,bcar,bced,bcib,bdh,bdo,bgs,bmk,bok,bpv,bsz,bxb,caj,cjc,clh,cnt,coa,dok,eaa,eft,fpc,fpo,fpy,hpas,hro,kok,lgi,mbj,mbq,mjh,mor,nle,oah,ori,pato,pda,pdu,pge,pmos,prc,psx,rat,sbv,sepp,sfn,sht,sio,siq,stv,tpk,umr,vvl,wci,wct : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
vpe:Varpa_2796 DNA ligase d                              K01971     854     372      91    0.297    367     
vpe:Varpa_0532 DNA ligase d                              K01971     869     307      76    0.285    355     
vpe:Varpa_5498 ATP dependent DNA ligase                  K01971     551     306      76    0.282    347     
vpe:Varpa_3823 hypothetical protein                                 463     117      33    0.279    222     
vpe:Varpa_0569 hypothetical protein                                 865     110      31    0.252    317     
vpe:Varpa_2840 ATP dependent DNA ligase                  K01971     284     109      31    0.268    220     
vpe:Varpa_1726 deoxyxylulose-5-phosphate synthase        K01662     618     104      30    0.258    198     
vpe:Varpa_3991 hypothetical protein                      K02004     869     103      29    0.279    190     
vpe:Varpa_4064 faD-dependent pyridine nucleotide-disulf             442     102      29    0.248    282     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]