SSDB Paralog Search Result

KEGG ID :xcb:XC_1808 (849 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T00247 (aah,abp,abv,adl,ahd,ahp,ahr,bamt,bans,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmo,cput,ctec,ctfw,dav,dsq,echj,echl,echs,ecoh,fme,gbc,gbs,gtr,hlr,hpyb,jag,koy,kpa,kps,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pbc,pco,pes,pfp,ppq,psq,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 33 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
xcb:XC_0109 ATP-dependent DNA ligase                     K01971    1001    2303     531    0.422    1010    
xcb:XC_2951 ATP-dependent DNA ligase (EC:6.5.1.1)        K01971     534     278      69    0.280    357     
xcb:XC_0551 hypothetical protein                                    734     127      35    0.222    406     
xcb:XC_0552 hypothetical protein                                    815     119      33    0.270    344     
xcb:XC_1375 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate s  K01925     468     119      33    0.237    316     
xcb:XC_3202 penicillin-binding protein 1C                K05367     807     119      33    0.232    328     
xcb:XC_0286 chemotaxis protein                           K05874     657     115      32    0.273    209     
xcb:XC_4289 exodeoxyribonuclease V subunit gamma         K03583    1134     115      32    0.259    432     
xcb:XC_4223 OmpA-like protein                                      1011     114      32    0.231    325     
xcb:XC_0792 hypothetical protein                                    422     112      31    0.287    164     
xcb:XC_0919 TonB-dependent receptor                                 904     111      31    0.271    199     
xcb:XC_1106 hypothetical protein                                    600     111      31    0.239    234     
xcb:XC_1542 metallopeptidase                             K07386     670     110      31    0.274    186     
xcb:XC_0613 hypothetical protein                                    590     108      30    0.250    252     
xcb:XC_1744 multiphosphoryl transfer protein             K08483..   838     106      30    0.229    738     
xcb:XC_3389 hypothetical protein                                    737     106      30    0.241    245     
xcb:XC_3836 primosome assembly protein PriA              K04066     702     106      30    0.281    199     
xcb:XC_2034 hypothetical protein                                    308     105      30    0.274    219     
xcb:XC_2643 3-phosphoshikimate 1-carboxyvinyltransferas  K00800     438     105      30    0.228    311     
xcb:XC_3222 DNA polymerase III subunit delta' (EC:2.7.7  K02341     319     105      30    0.266    263     
xcb:XC_3854 isocitrate dehydrogenase                     K00031     743     105      30    0.249    281     
xcb:XC_4130 16S rRNA methyltransferase GidB              K03501     212     105      30    0.312    141     
xcb:XC_0424 4-alpha-glucanotransferase                   K00705     643     104      30    0.274    314     
xcb:XC_0434 component of multidrug efflux system                    371     104      30    0.265    200     
xcb:XC_1479 hypothetical protein                                    275     104      30    0.244    209     
xcb:XC_4141 TonB-dependent receptor                                 900     104      30    0.274    175     
xcb:XC_4241 phytochrome-like protein                                634     104      30    0.279    179     
xcb:XC_0201 superoxide dismutase                         K04565     165     103      29    0.268    127     
xcb:XC_1262 histidine kinase/response regulator hybrid             1194     102      29    0.259    162     
xcb:XC_3450 hypothetical protein                                    233     101      29    0.262    172     
xcb:XC_3627 GDP-mannose 4,6-dehydratase                  K01711     344     101      29    0.250    112     
xcb:XC_0672 multidrug resistance efflux pump                        363     100      29    0.243    251     
xcb:XC_2411 hypothetical protein                                   1264     100      29    0.235    392     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]