SSDB Paralog Search Result

KEGG ID :xce:Xcel_2233 (858 a.a.)
Definition:DNA polymerase LigD, polymerase domain-containing protein; K01971 DNA ligase (ATP)
Update status:T01135 (blz,brp,bsul,bsut,bthr,bww,ero,fpu,hia,hir,kpb,llx,mde,mgj,mus,nmx,nte,ppud,psoj,pxb,sagt,tot,trm,vcy,vda,vtu,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 37 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
xce:Xcel_1675 DNA polymerase LigD, polymerase domain-co  K01971     371     450     108    0.300    360     
xce:Xcel_1674 ATP dependent DNA ligase                   K01971     390     354      87    0.314    370     
xce:Xcel_2642 DNA ligase I, ATP-dependent Dnl1 (EC:6.5.  K01971     592     251      63    0.277    537     
xce:Xcel_0074 ATP-dependent helicase HrpA                K03578    1624     194      50    0.275    316     
xce:Xcel_2655 carbohydrate kinase FGGY                   K00848     579     174      46    0.261    513     
xce:Xcel_0214 FAD dependent oxidoreductase                          568     166      44    0.372    129     
xce:Xcel_0117 Superfamily I DNA and RNA helicase and he  K06860    1324     157      42    0.593    54      
xce:Xcel_0105 ABC transporter                            K01996     286     154      41    0.646    48      
xce:Xcel_2272 formamidopyrimidine-DNA glycosylase (EC:3  K10563     339     152      40    0.273    275     
xce:Xcel_2099 hypothetical protein                       K00627     537     149      40    0.366    123     
xce:Xcel_1106 DNA glycosylase/AP lyase, H2TH DNA-bindin  K05522     398     146      39    0.425    87      
xce:Xcel_1063 ABC transporter                            K18230     671     143      38    0.410    105     
xce:Xcel_3248 glutamyl-tRNA reductase (EC:1.2.1.70)      K02492     540     143      38    0.325    151     
xce:Xcel_0316 mycothiol biosynthesis acetyltransferase   K15520     367     141      38    0.493    69      
xce:Xcel_0471 NADH (or F420H2) dehydrogenase subunit C   K00332     283     141      38    0.675    40      
xce:Xcel_3155 exodeoxyribonuclease III Xth               K01142     316     141      38    0.435    92      
xce:Xcel_0928 glycoside hydrolase family 3 domain-conta  K05349     780     133      36    0.381    84      
xce:Xcel_2931 hypothetical protein                                  745     131      36    0.304    207     
xce:Xcel_2685 transcription-repair coupling factor       K03723    1218     129      35    0.336    140     
xce:Xcel_1000 hypothetical protein                                  464     126      35    0.509    53      
xce:Xcel_0210 ABC transporter                            K06147     785     124      34    0.509    55      
xce:Xcel_0701 PadR-like family transcriptional regulato             242     124      34    0.307    212     
xce:Xcel_1900 Superfamily I DNA and RNA helicase-like p             724     119      33    0.379    95      
xce:Xcel_2032 hypothetical protein                                  497     117      33    0.319    160     
xce:Xcel_0446 ResB family protein                        K07399     605     115      32    0.553    47      
xce:Xcel_3143 tRNA/rRNA methyltransferase SpoU                      283     114      32    0.438    48      
xce:Xcel_0723 ATP-dependent DNA helicase PcrA            K03657     896     109      31    0.347    124     
xce:Xcel_1911 hypothetical protein                                  484     109      31    0.317    120     
xce:Xcel_3304 amidinotransferase                                    356     109      31    0.583    36      
xce:Xcel_0709 putative signal transduction histidine ki             484     108      30    0.365    104     
xce:Xcel_1329 acetylglutamate kinase                     K00930     355     107      30    0.386    70      
xce:Xcel_3218 MMPL domain-containing protein             K06994    1002     106      30    0.543    46      
xce:Xcel_3221 hypothetical protein                       K00627     525     106      30    0.377    53      
xce:Xcel_1161 signal recognition particle-docking prote  K03110     388     104      30    0.362    94      
xce:Xcel_2814 peptidase S45 penicillin amidase           K01434     870     104      30    0.305    118     
xce:Xcel_0826 ParB domain-containing protein nuclease    K03497     333     103      29    0.356    87      
xce:Xcel_2732 glucose sorbosone dehydrogenase                       442     100      29    0.338    136     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]