SSDB Paralog Search Result

KEGG ID :xce:Xcel_2642 (592 a.a.)
Definition:DNA ligase I, ATP-dependent Dnl1; K10747 DNA ligase 1
Update status:T01135 (agl,aoa,asq,avu,bcig,bgy,bhu,boe,btho,caby,hhsr,hsi,jaz,jeu,kba,mbf,myz,pmuc,suam,vhl,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 53 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
xce:Xcel_1674 ATP dependent DNA ligase                             390      261 (    -)      65    0.343    230      -> 
xce:Xcel_2233 DNA polymerase LigD, polymerase domain pr K01971     858      251 (    -)      63    0.277    537      -> 
xce:Xcel_2194 transcriptional regulator, LuxR family               937      190 (    -)      49    0.303    416      -> 
xce:Xcel_2606 cell divisionFtsK/SpoIIIE                 K03466    1438      182 (    -)      47    0.270    514      -> 
xce:Xcel_0206 RNA polymerase, sigma-24 subunit, ECF sub           1441      177 (    -)      46    0.261    348      -> 
xce:Xcel_3244 hypothetical protein                                1446      174 (    -)      46    0.295    275      -> 
xce:Xcel_3253 Uroporphyrinogen-III synthase-like protei K01719     526      174 (    -)      46    0.261    540      -> 
xce:Xcel_0084 peptidase M15B and M15C DD-carboxypeptida            722      172 (    -)      45    0.268    473      -> 
xce:Xcel_1840 5-methyltetrahydropteroyltriglutamate--ho K00549     776      172 (    -)      45    0.280    529      -> 
xce:Xcel_3134 phosphoribosylamine/glycine ligase        K01945     428      172 (    -)      45    0.262    423      -> 
xce:Xcel_2928 hypothetical protein                                1284      171 (    -)      45    0.265    582      -> 
xce:Xcel_3259 heavy metal translocating P-type ATPase   K17686     884      171 (    -)      45    0.271    354      -> 
xce:Xcel_0074 ATP-dependent helicase HrpA               K03578    1624      162 (    -)      43    0.291    313      -> 
xce:Xcel_3220 copper resistance D domain protein        K02351..   711      162 (    -)      43    0.259    386      -> 
xce:Xcel_3250 FAD dependent oxidoreductase              K00231     499      158 (    -)      42    0.266    413      -> 
xce:Xcel_3073 acetyl-CoA acetyltransferase              K00626     376      153 (    -)      41    0.272    389      -> 
xce:Xcel_1942 hypothetical protein                                 816      151 (    -)      40    0.273    444      -> 
xce:Xcel_2280 Dak phosphatase                           K07030     553      129 (    -)      35    0.302    275      -> 
xce:Xcel_1624 nitrite reductase (NAD(P)H), large subuni            878      128 (    -)      35    0.300    207      -> 
xce:Xcel_3287 putative transmembrane anti-sigma factor             273      127 (    -)      35    0.347    121      -> 
xce:Xcel_1345 hypothetical protein                                 276      125 (    -)      34    0.301    272      -> 
xce:Xcel_3114 short-chain dehydrogenase/reductase SDR   K00059     478      121 (    -)      33    0.308    224      -> 
xce:Xcel_1135 FAD-dependent pyridine nucleotide-disulph            404      120 (    -)      33    0.300    293      -> 
xce:Xcel_3175 Peptidoglycan-binding domain 1 protein               363      116 (    -)      32    0.312    173      -> 
xce:Xcel_2600 histidine kinase                                     489      114 (    -)      32    0.316    152      -> 
xce:Xcel_2764 hypothetical protein                                 543      113 (    -)      32    0.308    143      -> 
xce:Xcel_3367 hypothetical protein                                 690      113 (    -)      32    0.300    277      -> 
xce:Xcel_0703 hypothetical protein                                 233      111 (    -)      31    0.453    64       -> 
xce:Xcel_0496 hypothetical protein                                 405      109 (    -)      31    0.348    66       -> 
xce:Xcel_1237 CinA domain protein                       K03743     161      109 (    -)      31    0.331    139      -> 
xce:Xcel_2816 SAF domain protein                                   227      109 (    -)      31    0.325    169      -> 
xce:Xcel_2644 transcriptional regulator, LysR family               306      108 (    -)      30    0.319    94       -> 
xce:Xcel_0774 DEAD/DEAH box helicase domain protein                605      107 (    -)      30    0.305    151      -> 
xce:Xcel_1080 binding-protein-dependent transport syste K05846     207      107 (    -)      30    0.314    204      -> 
xce:Xcel_2497 hypothetical protein                                 170      107 (    -)      30    0.329    161      -> 
xce:Xcel_0700 ABC transporter related protein           K02003     242      106 (    -)      30    0.301    153      -> 
xce:Xcel_1676 hypothetical protein                                 199      106 (    -)      30    0.301    176      -> 
xce:Xcel_2510 ABC transporter related protein           K02003     274      106 (    -)      30    0.328    125      -> 
xce:Xcel_0378 PfkB domain protein                                  301      105 (    -)      30    0.303    165      -> 
xce:Xcel_1815 nitrite reductase (NAD(P)H), large subuni K00362     875      105 (    -)      30    0.300    203      -> 
xce:Xcel_3314 hypothetical protein                                 526      105 (    -)      30    0.311    196      -> 
xce:Xcel_2202 protein of unknown function DUF1503                  250      104 (    -)      30    0.317    230      -> 
xce:Xcel_3280 5'-3' exonuclease                                    313      104 (    -)      30    0.307    153      -> 
xce:Xcel_1377 hypothetical protein                                1027      103 (    -)      29    0.314    86       -> 
xce:Xcel_3197 transcriptional regulator, LuxR family               876      103 (    -)      29    0.301    193      -> 
xce:Xcel_1640 hypothetical protein                                 478      102 (    -)      29    0.313    182      -> 
xce:Xcel_3317 aminoglycoside phosphotransferase         K07028     586      102 (    -)      29    0.320    175      -> 
xce:Xcel_0187 glycoside hydrolase family 3 domain prote K05349     803      101 (    -)      29    0.325    120      -> 
xce:Xcel_2545 hypothetical protein                                 166      101 (    -)      29    0.368    87       -> 
xce:Xcel_0181 bifunctional deaminase-reductase domain p            204      100 (    -)      29    0.331    121      -> 
xce:Xcel_0460 transcriptional regulator, TetR family               236      100 (    -)      29    0.407    59       -> 
xce:Xcel_1889 6-phosphogluconate dehydrogenase, decarbo K00033     483      100 (    -)      29    0.305    197      -> 
xce:Xcel_3065 conserved hypothetical protein                       187      100 (    -)      29    0.375    72       -> 

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