SSDB Paralog Search Result

KEGG ID :zga:zobellia_42 (571 a.a.)
Definition:alpha-amylase (EC:3.2.1.1); K01176 alpha-amylase
Update status:T01586 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,hpyb,jag,kpa,kps,lmoq,lmox,lmr,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pbc,pco,pes,pfp,ppq,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 13 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
zga:zobellia_530 oligo-1,6-glucosidase (EC:3.2.1.10)     K01182     564     245      62    0.229    358     
zga:zobellia_1626 cyclomaltodextrinase (EC:3.2.1.54)                447     225      57    0.248    448     
zga:zobellia_369 alpha-amylase (EC:3.2.1.1)              K01176     477     187      48    0.219    384     
zga:zobellia_1248 glycoside hydrolase (EC:3.2.1.-)                  592     131      36    0.205    453     
zga:zobellia_4120 anti-sigma factor                                 331     129      35    0.219    283     
zga:zobellia_2178 DNA polymerase III subunit alpha (EC:  K02337    1478     121      33    0.229    275     
zga:zobellia_1197 hypothetical protein                              457     107      30    0.268    127     
zga:zobellia_1208 AraC family transcriptional regulator             293     106      30    0.222    284     
zga:zobellia_1223 alpha-L-rhamnosidase (EC:3.2.1.40)                799     106      30    0.208    452     
zga:zobellia_1055 (trans)glycosidase superfamily protei  K07407     611     101      29    0.236    199     
zga:zobellia_4362 aminopeptidase (EC:3.4.11.-)                     1214     101      29    0.229    144     
zga:zobellia_1827 Xaa-Pro aminopeptidase, family M24 (E  K01262     437     100      29    0.180    233     
zga:zobellia_4479 4-carboxymuconolactone decarboxylase              520     100      29    0.261    268     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]