GFIT result for amd |
[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
amd:AMED_5203 (287 a.a.) |
--  |
K01971  | ligD  | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||||||
DBHit(Length) | Over- lap | Ident. (%) | Score | margin | Para- log | Cont. | KO | Orth | Current Annotation | |
---|---|---|---|---|---|---|---|---|---|---|
> amm:AMES_5141(287) | 287 | 100.0 | 1960 | (1320) | 11 | <> | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> amn:RAM_26505(287) | 287 | 100.0 | 1960 | (1320) | 11 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> amz:B737_5141(287) | 287 | 100.0 | 1960 | (1320) | 11 | <> | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> aprt:MUY14_11555(287) | 286 | 88.5 | 1746 | (1117) | 19 | <> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> amyc:CU254_25880(287) | 286 | 79.0 | 1563 | (933) | 8 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gly:K3N28_19015(302) | 286 | 63.6 | 1274 | (1147) | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> pmad:BAY61_01230(291) | 284 | 64.4 | 1259 | (643) | 3 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> amyy:YIM_01445(608) | 287 | 59.6 | 1179 | (563) | 11 | -- | K01971 | ligD | ykoU1; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ngv:CDO52_22140(303) | 286 | 58.0 | 1136 | (1032) | 0 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sen:SACE_3394(292) | 277 | 59.2 | 1071 | (490) | 3 | -- | ATP-dependent DNA ligase | |||
> sacg:FDZ84_36650(289) | 280 | 57.9 | 1057 | (449) | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ahm:TL08_12295(305) | 292 | 50.0 | 943 | (405) | 3 | -- | K01971 | ligD | DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bsau:DWV08_07405(303) | 282 | 50.7 | 938 | (832) | 0 | -> | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ahg:AHOG_12440(304) | 284 | 50.4 | 935 | (399) | 2 | -- | K01971 | ligD | ykoU1; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> acad:UA74_13140(304) | 284 | 51.1 | 925 | (378) | 2 | -- | K01971 | ligD | DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> acti:UA75_13220(304) | 284 | 51.1 | 925 | (376) | 2 | -- | K01971 | ligD | DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> smao:CAG99_01250(309) | 285 | 50.9 | 898 | (294) | 20 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sgob:test1122_24615(303) | 278 | 46.8 | 883 | (284) | 2 | -> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sbro:GQF42_37975(310) | 288 | 47.2 | 882 | (289) | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sact:DMT42_31355(308) | 275 | 48.7 | 875 | (259) | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ghl:GM160_07635(296) | 284 | 49.6 | 869 | (759) | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> rsua:LQF12_14800(299) | 291 | 47.1 | 863 | (331) | 5 | -- | ligD; non-homologous end-joining DNA ligase | |||
> aey:CDG81_11065(300) | 281 | 48.4 | 862 | (29) | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> rci:RCIX1966(298) | 283 | 44.2 | 859 | 0 | -> | K01971 | ligD | conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
> sgv:B1H19_08155(312) | 291 | 46.7 | 859 | (243) | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> salb:XNR_4488(313) | 285 | 48.8 | 856 | (234) | 17 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sdw:K7C20_04795(316) | 291 | 46.4 | 856 | (232) | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> svio:HWN34_22675(313) | 285 | 48.8 | 856 | (232) | 17 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> tee:Tel_12775(305) | 293 | 45.1 | 856 | 0 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
> snig:HEK616_22950(333) | 295 | 47.5 | 855 | (235) | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> hbe:BEI_0346(309) | 278 | 48.2 | 849 | (693) | 1 | -> | K01971 | ligD | ligD1; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> src:M271_24695(312) | 292 | 46.2 | 848 | (260) | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sauo:BV401_23550(314) | 292 | 46.2 | 847 | (268) | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> srw:TUE45_07099(311) | 295 | 46.4 | 847 | (226) | 29 | -- | K01971 | ligD | Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scin:CP977_32815(305) | 271 | 50.9 | 844 | (727) | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ssoi:I1A49_23885(314) | 292 | 46.6 | 842 | (263) | 8 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sdrz:NEH16_01735(294) | 272 | 49.3 | 841 | (257) | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sky:D0C37_24225(313) | 285 | 47.7 | 841 | (217) | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> srug:F0345_07590(315) | 285 | 49.1 | 841 | (223) | 18 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stir:DDW44_29360(310) | 290 | 45.9 | 840 | (234) | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sauh:SU9_004015(316) | 289 | 46.4 | 838 | (211) | 8 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> svl:Strvi_0339(312) | 292 | 46.2 | 837 | (246) | 9 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sant:QR300_21465(?) | 292 | 45.9 | 832 | (231) | 0 | -- | - | |||
> slc:SL103_13250(317) | 291 | 46.4 | 830 | (222) | 10 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> seng:OJ254_22150(?) | 295 | 46.8 | 828 | (202) | 0 | -- | - | |||
> mpd:MCP_2125(295) | 277 | 44.0 | 827 | 0 | -> | K01971 | ligD | conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
> scyg:S1361_32365(311) | 293 | 47.4 | 825 | (224) | 9 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sve:SVEN_0608(309) | 270 | 49.3 | 825 | (241) | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> grs:C7S20_03825(305) | 288 | 42.4 | 822 | (271) | 1 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> saln:SALB1_1758(295) | 292 | 43.8 | 821 | 0 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
> stro:STRMOE7_06835(317) | 291 | 46.4 | 821 | (208) | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mshg:MSG_02294(296) | 289 | 43.6 | 819 | (209) | 3 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> msto:MSTO_10720(296) | 290 | 45.5 | 819 | (223) | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> gfl:GRFL_1807(302) | 289 | 42.2 | 818 | (242) | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> rbar:AWN76_001560(303) | 288 | 44.1 | 818 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
> sby:H7H31_15640(301) | 274 | 47.4 | 817 | (204) | 18 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scyn:N8I84_32380(?) | 299 | 45.5 | 816 | (205) | 0 | -- | - | |||
> stud:STRTU_006221(328) | 292 | 45.5 | 816 | (199) | 0 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> talu:JDY09_02780(305) | 288 | 44.1 | 816 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
> srim:CP984_20280(311) | 285 | 44.9 | 815 | (174) | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> srk:FGW37_32370(320) | 289 | 47.4 | 815 | (226) | 16 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stee:F3L20_13875(308) | 289 | 46.7 | 815 | (217) | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sho:SHJGH_7216(311) | 295 | 44.4 | 813 | (203) | 12 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> shy:SHJG_7456(311) | 295 | 44.4 | 813 | (203) | 12 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> stui:GCM10017668_58580(309) | 281 | 47.3 | 813 | (223) | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mbrd:MBRA_41070(299) | 280 | 44.3 | 812 | (214) | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mman:MMAN_08680(296) | 290 | 43.4 | 812 | (232) | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mnv:MNVI_39010(298) | 285 | 45.6 | 812 | (198) | 6 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> msak:MSAS_04120(296) | 289 | 43.9 | 812 | (226) | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sarg:HKX69_05445(?) | 295 | 44.1 | 812 | (203) | 0 | -- | - | |||
> stsi:A4E84_33405(319) | 290 | 46.6 | 812 | (237) | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mxe:MYXE_27190(299) | 289 | 43.3 | 811 | (183) | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sld:T261_1305(310) | 286 | 45.5 | 810 | (195) | 3 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> spla:CP981_05385(310) | 291 | 44.7 | 810 | (178) | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scad:DN051_09500(304) | 280 | 47.1 | 806 | (210) | 12 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> spav:Spa2297_27050(309) | 294 | 45.6 | 806 | (208) | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> micg:GJV80_07475(311) | 273 | 44.0 | 805 | (208) | 4 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> nah:F5544_13425(297) | 280 | 46.1 | 805 | (235) | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mmam:K3U93_11225(306) | 300 | 44.7 | 804 | (200) | 5 | -> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scae:IHE65_07845(307) | 274 | 48.5 | 804 | (217) | 6 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> speu:CGZ69_02765(298) | 271 | 46.1 | 804 | (173) | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> svt:SVTN_30635(309) | 291 | 46.4 | 804 | (194) | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> msim:MSIM_00630(296) | 287 | 44.6 | 802 | (208) | 3 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> spac:B1H29_06630(308) | 295 | 46.1 | 802 | (214) | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> dms:E8L03_18420(308) | 288 | 46.2 | 801 | (698) | 0 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> fpf:DCC35_18760(299) | 269 | 44.6 | 801 | 0 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
> sdec:L3078_37645(308) | 275 | 49.5 | 801 | (202) | 10 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mhek:JMUB5695_02675(299) | 289 | 43.3 | 797 | (175) | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> msa:Mycsm_03038(295) | 288 | 42.7 | 797 | (206) | 4 | -- | K01971 | ligD | DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> shaw:CEB94_34285(308) | 280 | 46.8 | 797 | (206) | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mit:OCO_29900(296) | 288 | 43.4 | 795 | (182) | 3 | -> | K01971 | ligD | putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sge:DWG14_01709(309) | 275 | 45.8 | 794 | (171) | 6 | -- | K01971 | ligD | ligD_2; Multifunctional non-homologous end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> schf:IPT68_30465(308) | 293 | 44.7 | 793 | (188) | 3 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> scoe:CP976_35435(309) | 281 | 45.9 | 793 | (210) | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> shau:K9S39_02110(?) | 286 | 44.4 | 793 | (210) | 0 | -- | - | |||
> slf:JEQ17_10410(309) | 281 | 45.9 | 793 | (174) | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> strd:NI25_05905(304) | 299 | 45.2 | 793 | (192) | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> strf:ASR50_29170(308) | 290 | 46.6 | 792 | (191) | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mchi:AN480_15580(296) | 288 | 43.4 | 790 | (177) | 3 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mir:OCQ_30560(296) | 288 | 43.4 | 790 | (177) | 4 | -> | K01971 | ligD | putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] |