GFIT result for T01269

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

amd:AMED_5203
(287 a.a.)
 
--
 
K01971  ligD  [tr:A0A0H3D8J2_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> amm:AMES_5141(287)287100.01960(1320)11<> K01971  ligD  [tr:G0FQR0_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26505(287)287100.01960(1320)11<> K01971  ligD  [tr:G0FQR0_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5141(287)287100.01960(1320)11<> K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_3394(292)27759.21071(490)3--     [tr:A4FF44_SACEN] ATP-dependent DNA ligase (EC:6.5.1.1)
> rci:RCIX1966(298)28344.2859
0-> K01971  ligD  [tr:Q0W3B3_METAR] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salb:XNR_4488(313)28548.8856(234)17-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)29345.1856
0-> K01971  ligD  [tr:A0A0S2TFP3_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> src:M271_24695(312)29246.2848(260)7-- K01971  ligD  [tr:A0A0A0NK22_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_07099(311)29546.4847(226)0-- K01971  ligD  [tr:A0A0U5LT13_STRRE] Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_0339(312)29246.2837(246)9-- K01971  ligD  [tr:G2PB75_STRVO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2125(295)27744.0827
0-> K01971  ligD  [tr:D1Z0H5_METPS] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_0608(309)27049.3825(241)9-- K01971  ligD  [tr:F2R8H7_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_7216(311)29544.4813(203)12-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shy:SHJG_7456(311)29544.4813(203)12-- K01971  ligD  [tr:H2JMG2_STRHJ] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1305(361)28645.5810(195)2-- K01971  ligD  [tr:A0A0D4DGP5_9ACTN] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_30635(309)29146.4804(194)5-- K01971  ligD  [tr:A0A0B5I658_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_03038(295)28842.7797(206)4-- K01971  ligD  [tr:L0IW75_9MYCO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mit:OCO_29900(296)28843.4795(182)3-> K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_29170(308)29046.6792(191)0-- K01971  ligD  [tr:A0A0U3RG51_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14155(296)28843.4790(177)4-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_30560(296)28843.4790(177)4-> K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_14835(296)28843.4790(175)3-> K01971  ligD  [tr:I2AF58_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_05935(319)27947.7790(207)6-- K01971  ligD  [tr:A0A076LZN4_STRLI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mia:OCU_29810(296)28843.1787(174)5-> K01971  ligD  [tr:H8IQK1_MYCIA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6498(319)27947.7787(204)10-- K01971  ligD  [tr:Q9ZC15_STRCO] SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlt:VC82_553(323)28642.3786
0-- K01971  ligD  [tr:A0A0D5YPS4_9FLAO] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_6202(312)29944.5784(184)15-- K01971  ligD  [tr:A0A0K2B2C0_STRAM] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_29120(296)28842.7778(163)3-> K01971  ligD  [tr:S4ZH15_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_6912(306)27545.1777(167)0-- K01971  ligD  [tr:A0A0M5IV58_STRPR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_10695(301)29544.1775(164)0-- K01971  ligD  [tr:A0A0U3P0H3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_27360(308)27645.3771(170)4-- K01971  ligD  [tr:A0A089XJS0_STRGA] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fsi:Flexsi_0431(291)27938.4762
0-- K01971  ligD  [tr:F8E8Z5_FLESM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_0115(337)28641.6754
0-- K01971  ligD  [tr:A0A0F7CTE9_9CHLR] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_3038(301)28841.3750(183)3-- K01971  ligD  [tr:F5Z238_MYCSD] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psd:DSC_15030(830)27242.6748(629)7-- K01971  ligD  [tr:G7UVI9_PSEUP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)29239.4746(213)1-> K01971  ligD  [tr:A5ETW7_BRASB] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)29142.6740()0-- K01971  ligD  [tr:A0A0X8HBT1_9GAMM] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_6707(304)27144.6739(163)8-- K01971  ligD  [tr:A0A0B5EW78_STRA4] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_27575(303)27645.7737(92)7-- K01971  ligD  [tr:A0A0C5G7H9_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dji:CH75_06755(300)28642.0725(67)1--     [tr:A0A023NPY5_9GAMM] DNA polymerase
> scu:SCE1572_21330(687)28841.0725(55)47-- K01971  ligD  [tr:S4Y1N2_SORCE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sch:Sphch_2999(835)26940.9723(615)6-- K01971  ligD  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_17401(329)26349.4718(135)24-- K01971  ligD  [tr:C9ZET8_STRSW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0832(656)29043.1716(18)16-- K01971  ligD  [tr:A7H8J7_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psuw:WQ53_07800(871)26943.5715(596)0-- K01971  ligD  [tr:A0A0E3Z1B7_9GAMM] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0154(848)27240.4713(17)1-- K01971  ligD  [tr:A0A0A8K0U2_9RHIZ] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buj:BurJV3_0025(824)27841.4712(611)6-- K01971  ligD  [tr:G0K266_STEMA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dja:HY57_11790(292)28839.9711
0--     [tr:A0A075K234_9GAMM] DNA polymerase
> llo:LLO_1004(293)27538.2710
0-- K01971  ligD  [tr:D3HR29_LEGLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smt:Smal_0026(825)27640.2709()5-- K01971  ligD  [tr:B4SR30_STRM5] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dor:Desor_2615(813)27439.1706()0-- K01971  ligD  [tr:G7W6F7_DESOD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smz:SMD_0023(830)27840.6706(43)4-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sacz:AOT14_17700(719)27440.9705(591)0-- K01971  ligD  [tr:A0A0S1AZB1_9GAMM] DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)27339.9704(75)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sml:Smlt0053(828)27540.4704(46)6-- K01971  ligD  [tr:B2FU16_STRMK] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)28439.1703()1-- K01971  ligD  [tr:A0A068TDW9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)28541.1701(579)82-- K01971  ligD  [tr:A9GRV1_SORC5] unnamed protein product; High confidence in function and specificity (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngg:RG540_CH33090(842)28439.1700()3-- K01971  ligD  [tr:A0A068STE9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1301(301)28638.5699(119)1--     [tr:Q11IS8_CHESB] conserved hypothetical protein
> nda:Ndas_0258(292)28941.5698(594)6-- K01971  ligD  [tr:D7AUE9_NOCDD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)28838.2695(594)2-- K01971  ligD  [tr:A0A0K2BE58_9BURK] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xcb:XC_0109(1001)27240.4691(40)30-- K01971  ligD  [tr:A0A0H2X2G3_XANC8] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xcc:XCC0105(1001)27240.4691(40)31-- K01971  ligD  [tr:Q8PE76_XANCP] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dai:Desaci_2451(813)27438.3690()2-- K01971  ligD  [tr:I4D6H7_DESAJ] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xca:xcc-b100_0115(1001)27240.4689(38)32-- K01971  ligD  [tr:B0RLL6_XANCB] dnl; DNA ligase (ATP) (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xcp:XCR_0122(950)27240.4689(32)39-- K01971  ligD  [tr:G0CHN8_XANCA] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)29242.8688(70)136-- K01971  ligD  [tr:B8JDU3_ANAD2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sna:Snas_2802(302)28141.6687(99)1-- K01971  ligD  [tr:D3Q8A4_STANL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)28742.9685(83)105-- K01971  ligD  [tr:Q2IP30_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amim:MIM_c30320(889)27241.2685()1-- K01971  ligD  [tr:W0PE80_9BURK] putative DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ddh:Desde_0514(812)27438.3684()0-- K01971  ligD  [tr:I4A4U0_DESDJ] ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xtn:FD63_00155(927)27138.7684()32-- K01971  ligD  [tr:A0A0G3LHE4_XANCT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0832(684)29242.8683(53)136-- K01971  ligD  [tr:B4UEC1_ANASK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)28838.9683()0-- K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> opr:Ocepr_0487(299)27342.9682(569)1-- K01971  ligD  [tr:E4U673_OCEP5] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)26941.3682()0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphm:G432_04400(849)28440.8681()6-- K01971  ligD  [tr:M4SD88_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsh:Rsph17029_1337(868)26541.1680()6-- K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ddl:Desdi_2684(815)27438.0679()0-- K01971  ligD  [tr:L0F8G4_DESDL] ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhz:RHPLAN_34800(859)26938.3679(578)0-- K01971  ligD  [tr:A0A127EUJ3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lgu:LG3211_2416(865)28538.2678()0-- K01971  ligD  [tr:A0A0S2G6C3_9GAMM] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)27338.1678(36)9-- K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)27338.1678(36)9-- K01971  ligD  [tr:M4MX75_SINM2] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_15190(865)27338.1678(36)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_02600(865)27338.1678(36)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)27338.1678(36)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)27338.1678(37)7-- K01971  ligD  [tr:A0A0E0UFQ3_SINMB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_chr2907(865)27338.1678(36)14-- K01971  ligD  [tr:F7X888_SINMM] probabable ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgy:Sgly_0962(813)27238.6677()0-- K01971  ligD  [tr:F0T2I5_SYNGF] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4Chr2868(865)27338.5676(34)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aka:TKWG_19270(847)27439.4675()2-- K01971  ligD  [tr:I3UF79_ADVKW] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cid:P73_3679(812)25941.3675(574)7-- K01971  ligD  [tr:A0A0B5DZF4_9RHOB] DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> deq:XM25_14770(815)27838.1675(13)1-- K01971  ligD  [tr:A0A0K0TZ07_9RHIZ] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hoe:IMCC20628_02615(834)26339.9675(556)3-- K01971  ligD  [tr:A0A0F7PJ82_9RHIZ] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)27238.2675(51)9-- K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rti:DC20_13500(303)29138.8673()0-- K01971  ligD  [tr:A0A0P0CYM1_9BACT] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cij:WG74_06635(829)26140.2672()0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)28435.9672()1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bgp:BGL_1c11440(971)29037.9671(568)86-- K01971  ligD  [tr:A0A0B6S0A2_BURGL] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpla:bpln_1g10960(932)29037.9671(569)0-- K01971  ligD  [tr:A0A0P0KE94_9BURK] DNA primase small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...