GFIT result for T03230

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

amq:AMETH_0590
(331 a.a.)
 
--
 
    [tr:A0A076MSB4_AMYME] lig; DNA polymerase LigD, polymerase domain protein
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> amd:AMED_4149(334)32677.31785(853)12<-     [tr:A0A0H3D5N1_AMYMU] lig; ATP-dependent DNA ligase
> amm:AMES_4101(334)32677.31785(853)12<-     [tr:G0FQ74_AMYMS] lig; ATP-dependent DNA ligase
> amn:RAM_21135(334)32677.31785(853)12<-     [tr:G0FQ74_AMYMS] ATP-dependent DNA ligase
> amz:B737_4101(334)32677.31785(853)12<-    lig; ATP-dependent DNA ligase
> pmad:BAY61_10265(334)32974.81784(936)0<-    ATP-dependent DNA ligase
> aoi:AORI_5277(335)33475.41761(800)8<-     [tr:R4SZ83_AMYOR] lig; DNA ligase (ATP)
> cai:Caci_5821(352)32873.81756(733)2<-     [tr:C7QDQ5_CATAD] DNA polymerase LigD, polymerase domain protein
> asd:AS9A_2916(332)32775.81743(893)2<-     [tr:F6EK05_HOYSD] ATP-dependent DNA ligase
> aja:AJAP_24085(335)33474.01737(776)7<-     [tr:A0A075UYX2_9PSEU] ATP-dependent DNA ligase
> alu:BB31_38590(335)33473.41706(736)5<-     [tr:A0A093CTH9_9PSEU] ATP-dependent DNA ligase
> nsl:BOX37_16740(333)33472.81701(875)0<-     [tr:A0A1J0VTE2_9NOCA] ATP-dependent DNA ligase
> ncy:NOCYR_2657(333)32872.91700(897)5<-     [tr:H6R6R4_NOCCG] conserved protein of unknown function; putative DNA polymerase domain
> nfa:NFA_25590(333)32773.71698(914)0<-     [tr:Q5YWN5_NOCFA] hypothetical protein
> nfr:ERS450000_01537(333)32773.41698(914)0<-     [tr:A0A0H5NKY5_NOCFR] Putative DNA ligase-like protein Rv0938/MT0965
> nbr:O3I_019820(333)32774.01695(875)6<-     [tr:K0EQA3_9NOCA] hypothetical protein
> nno:NONO_c40790(346)34169.21648(859)6<-     [tr:W5TIU3_9NOCA] DNA ligase-like protein
> nsr:NS506_04819(354)34466.91591(1086)0<-     [tr:A0A0B8NC63_9NOCA] DNA ligase (ATP)
> kphy:AOZ06_51270(328)32468.21539(505)0--     [tr:A0A0N9IGY3_9PSEU] ATP-dependent DNA ligase
> aym:YM304_28920(349)33561.81421(938)3--     [tr:M5A494_9ACTN] hypothetical protein
> sesp:BN6_24570(258)23577.41282(235)5<-     [tr:K0JUX2_SACES] DNA polymerase LigD, polymerase domain-containing protein
> mau:Micau_1636(341)32750.21146(281)6--     [tr:D9SZQ9_MICAI] DNA polymerase LigD, polymerase domain protein
> mil:ML5_1895(341)32749.81145(292)6--    DNA polymerase LigD, polymerase domain protein
> mid:MIP_00683(343)32850.91129(354)2<-     [tr:J9W6I2_MYCIP] Putative DNA ligase-like protein
> mir:OCQ_03210(343)32850.91126(351)3<-     [tr:A0A1X2KL66_9MYCO] hypothetical protein
> gpo:GPOL_c47200(358)33348.61125(262)3<-     [tr:H6MZH7_GORPV] DNA primase, small subunit
> mie:LG41_01625(343)32850.61125(350)3<-     [tr:X8CKM3_MYCIT] ATP-dependent DNA ligase
> mmal:CKJ54_01525(343)32651.21125(335)0<-    ATP-dependent DNA ligase
> ase:ACPL_7075(341)32348.61123(251)5--     [tr:G8SFG4_ACTS5] DNA ligase (ATP)
> mchi:AN480_01630(343)32850.61122(349)0<-    ATP-dependent DNA ligase
> mmm:W7S_01570(343)32850.61122(347)3<-     [tr:I2A7M5_9MYCO] hypothetical protein
> myo:OEM_03300(343)32850.61122(347)3<-     [tr:S4Z3B4_9MYCO] hypothetical protein
> mit:OCO_03170(343)32850.31121(346)3<-    hypothetical protein
> mia:OCU_03270(343)32850.61116(341)3<-     [tr:H8ILS5_MYCIA] hypothetical protein
> gbr:Gbro_0416(360)33348.01114(251)3<-     [tr:D0LDD0_GORB4] DNA primase small subunit
> sct:SCAT_5514(335)33148.91113(587)8<-     [tr:F8JRK1_STREN] conserved protein of unknown function
> scy:SCATT_55170(335)33148.91113(587)8<-     [tr:F8JRK1_STREN] hypothetical protein
> gor:KTR9_0351(363)33749.31112(249)3<-     [tr:J9REQ8_9ACTN] DNA primase, small subunit
> cwo:Cwoe_3833(380)32649.11110(575)8--     [tr:D3F2I4_CONWI] DNA primase small subunit
> ams:AMIS_68170(340)32948.01107(256)7--     [tr:I0HGA0_ACTM4] hypothetical protein
> gta:BCM27_02265(361)33749.31107(224)0<-    ATP-dependent DNA ligase
> vma:VAB18032_12780(341)32748.31106(202)8--     [tr:F4FDY9_VERMA] DNA primase, small subunit
> ace:Acel_1378(339)32751.41105(542)2--     [tr:A0LUP0_ACIC1] conserved hypothetical protein
> age:AA314_01083(354)32050.31105(637)2<-     [tr:A0A0G2ZHC7_9DELT] ATP-dependent DNA ligase
> miz:BAB75_01785(342)32749.21105(278)0<-     [tr:A0A0N1LWY7_9MYCO] ATP-dependent DNA ligase
> mav:MAV_0362(342)32848.81104(328)2<-     [tr:A0A0H3A1W1_MYCA1] ligD; DNA polymerase LigD, polymerase domain
> mava:LA64_01715(342)32848.81104(328)2<-    ATP-dependent DNA ligase
> mavd:NF84_01660(342)32848.81104(328)2<-    ATP-dependent DNA ligase
> mavr:LA63_01705(342)32848.81104(328)2<-     [tr:X8BCY5_MYCAV] ATP-dependent DNA ligase
> mao:MAP4_3530(342)32848.81103(339)3<-    hypothetical protein
> mavi:RC58_17535(342)32848.81103(327)2<-    ATP-dependent DNA ligase
> mavu:RE97_17570(342)32848.81103(339)2<-    ATP-dependent DNA ligase
> mpa:MAP_0340c(342)32848.81103(339)0<-     [tr:Q744K1_MYCPA] hypothetical protein
> stp:Strop_1543(341)32848.51103(176)4--     [tr:A4X559_SALTO] DNA primase, small subunit
> strf:ASR50_30230(337)33146.81103(529)0<-     [tr:A0A0U3GEW8_9ACTN] ATP-dependent DNA ligase
> spri:SPRI_1067(337)33348.91102(474)0<-     [tr:A0A0M3QHE0_STRPR] DNA polymerase LigD polymerase subunit
> mki:LH54_13600(345)32849.71100(288)3<-     [tr:X7YEE8_MYCKA] ATP-dependent DNA ligase
> mkn:MKAN_13620(345)32849.71100(288)3<-     [tr:U5WQH5_MYCKA] ATP-dependent DNA ligase
> srn:A4G23_04998(331)32449.11097(505)0<-     [tr:A0A1D8G9H2_9ACTN] ykoU; putative ATP-dependent DNA ligase YkoU
> rop:ROP_51690(342)33049.71095(267)5<-     [tr:C1AUS6_RHOOB] hypothetical protein
> saq:Sare_1486(341)32848.51094(169)6--     [tr:A8LUN1_SALAI] DNA polymerase LigD polymerase domain
> mgo:AFA91_03770(348)33047.31093(276)2--     [tr:A0A0K0X115_9MYCO] ATP-dependent DNA ligase
> mks:LG40_13460(345)32649.11093(281)4--    ATP-dependent DNA ligase
> sclf:BB341_03015(338)32048.11092(541)0<-    ATP-dependent DNA ligase
> sdv:BN159_1715(338)33348.31091(558)3<-     [tr:K4R0C7_9ACTN] DNA polymerase LigD, polymerase domain-containing protein
> mche:BB28_01375(342)32748.01090(252)0<-    ATP-dependent DNA ligase
> roa:Pd630_LPD01628(342)33049.11090(248)3<-     [tr:W8GTD1_RHOOP] putative ATP-dependent DNA ligase ykoU
> msa:Mycsm_06080(350)32846.61089(255)5--     [tr:L0J3V2_9MYCO] DNA polymerase LigD, polymerase domain protein
> rha:RHA1_ro05108(342)33048.81089(256)2<-     [tr:Q0S6E7_RHOJR] possible DNA ligase (ATP), N-terminal
> rav:AAT18_23210(350)32949.81086(568)2<-     [tr:A0A059MI76_9NOCA] ATP-dependent DNA ligase
> mne:D174_25760(350)33047.91085(179)4--     [tr:V5XH29_MYCNE] ATP-dependent DNA ligase
> msb:LJ00_31150(349)33047.01085(275)3--     [tr:I7GFM1_MYCS2] ATP-dependent DNA ligase
> msg:MSMEI_6136(349)33047.01085(275)3--     [tr:I7GFM1_MYCS2] DNA primase small subunit
> msh:LI98_31160(349)33047.01085(275)3--     [tr:A0A0D6J1J2_MYCSM] ATP-dependent DNA ligase
> msm:MSMEG_6301(350)33047.01085(275)3--     [tr:A0R5T1_MYCS2] ligD; DNA polymerase LigD polymerase subunit
> msn:LI99_31155(349)33047.01085(275)3--     [tr:A0A0D6J1J2_MYCSM] ATP-dependent DNA ligase
> myn:MyAD_25300(350)33047.91085(179)0--    ATP-dependent DNA ligase
> rpy:Y013_12140(350)33047.61085(284)3<-     [tr:V9XHA3_9NOCA] ATP-dependent DNA ligase
> sle:sle_11170(341)33248.21083(523)0<-     [tr:A0A0F7VLQ2_9ACTN] sle_11170; Probable ATP-dependent DNA ligase ykoU
> mll:B1R94_26765(343)32849.41082(223)0<-     [tr:A0A1U9PPY1_9MYCO] ATP-dependent DNA ligase
> rhw:BFN03_00560(342)33048.51082(258)0<-     [tr:A0A1D8T296_9NOCA] ATP-dependent DNA ligase
> scw:TU94_28790(341)32548.31082(506)4<-     [tr:A0A0C5G4B6_9ACTN] ATP-dependent DNA ligase
> stsi:A4E84_34485(343)32846.61082(465)0<-     [tr:A0A143C9N2_9ACTN] ATP-dependent DNA ligase
> mmi:MMAR_5265(346)32648.81080(286)2<-     [tr:B2HLD7_MYCMM] conserved hypothetical protein
> plk:CIK06_08385(342)32946.81080(200)0--    ATP-dependent DNA ligase
> rrz:CS378_12985(350)32948.91080(543)0<-    ATP-dependent DNA ligase
> mhad:B586_03590(346)32649.11078(256)0--    ATP-dependent DNA ligase
> maf:MAF_37390(346)32647.51075(279)3<-     [tr:F8M957_MYCA0] conserved hypothetical protein
> mbb:BCG_3790c(346)32647.51075(279)3<-     [tr:A0A0H3MAH6_MYCBP] Conserved hypothetical protein
> mbk:K60_038700(346)32647.51075(279)3<-    hypothetical protein
> mbm:BCGMEX_3791c(346)32647.51075(279)3<-    Hypothetical protein
> mbo:Mb3757c(346)32647.51075(279)3<-     [tr:A0A1R3Y5E6_MYCBO] hypothetical protein
> mbt:JTY_3792(346)32647.51075(279)3<-    hypothetical protein
> mbx:BCGT_3593(346)32647.51075(279)3<-    ATP-dependent DNA ligase
> mbz:LH58_20165(346)32647.51075(279)3<-     [tr:A0A083VRK9_MYCBI] ATP-dependent DNA ligase
> mce:MCAN_37521(346)32647.51075(279)2<-     [tr:G0TKD7_MYCCP] conserved hypothetical protein
> mcq:BN44_120130(346)32647.51075(279)3<-    Conserved protein of unknown function
> mcv:BN43_90239(346)32647.51075(279)3<-    Conserved protein of unknown function
> mmic:RN08_4114(346)32647.51075(279)0<-     [tr:A0A120IYX1_9MYCO] hypothetical protein
> mra:MRA_3768(346)32647.51075(279)3<-     [tr:A5U957_MYCTA] hypothetical protein
> mtb:TBMG_03775(346)32647.51075(279)3<-    conserved hypothetical protein
... ... ...