GFIT result for T03230

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

amq:AMETH_5252
(333 a.a.)
 
--
 
K01971  ligD  DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> actn:L083_1682(393)31655.71112(317)18-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahg:AHOG_20405(333)32852.41061(578)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfi:Celf_0800(491)32155.11058(661)13-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acad:UA74_22360(384)31953.91053(607)0-- K01971  ligD DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acti:UA75_22835(384)31953.91053(607)0-- K01971  ligD DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svi:Svir_20210(376)32749.81051(67)3-- K01971  ligD DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> all:CRK60828(484)33748.41039(267)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aoi:AORI_1870(318)31751.11030(234)9-- K01971  ligD lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> led:BBK82_36775(480)33850.61030(624)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsd:BLASA_3098(323)31553.01029(614)10-- K01971  ligD LigD; DNA ligase D/DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kphy:AOZ06_15230(477)33949.61020(599)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aja:AJAP_30105(318)31749.81019(246)6-- K01971  ligD Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sesp:BN6_42910(492)33752.81017(247)23-- K01971  ligD putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> alu:BB31_21455(?)31750.21011(227)0--    -
> afs:AFR_28570(389)31952.01003(183)12-- K01971  ligD DNA polymerase LigD ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmar:MODMU_2075(489)32551.7992(565)14-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahm:TL08_19410(347)31949.8986(602)0-- K01971  ligD DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sxi:SXIM_51150(317)32352.9985(597)16-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ncy:NOCYR_3082(323)31648.7974(386)3-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> noa:BKM31_27980(334)32349.5965(47)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdx:Psed_4989(683)32450.0958(148)42-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbi:Tbis_2338(321)32549.5955(464)3-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amyc:CU254_21255(329)33652.1949(203)0--    DNA ligase
> nbr:O3I_020445(318)31449.4947(279)3-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gob:Gobs_2120(436)34346.6946(508)25-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rav:AAT18_03845(325)31548.9931(119)5-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_28605(484)32148.3924(236)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> req:REQ_26630(323)31845.9923(202)5-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nfa:NFA_29400(320)31947.6922(317)0-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cphy:B5808_14620(902)32148.9917(519)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> roa:Pd630_LPD04033(313)31246.8914(155)8-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rrz:CS378_19505(325)31348.2913(87)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aau:AAur_0283(851)33647.3911(514)6-- K01971  ligD ATP-dependent DNA ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arr:ARUE_c02810(852)32847.6906(511)7-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aer:AERYTH_15445(869)33049.7902(527)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nsr:NS506_05464(316)32546.5900(272)0-- K01971  ligD DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mph:MLP_04810(812)34345.5895(513)6-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> satk:SA2016_3491(884)32047.8891(501)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arz:AUT26_01215(839)34845.1884(500)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strc:AA958_07435(334)33047.6884(480)9-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cum:NI26_01570(842)33647.9882(473)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arx:ARZXY2_3628(839)34844.8880(507)0-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fal:FRAAL4382(581)31845.6876(556)122-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arn:CGK93_01640(852)32446.3875(499)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agy:ATC03_01400(835)32647.9871(520)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmc:CMN_02036(834)31648.1868()9-- K01971  ligD ligD; Cmm ortholog CMM_2074; Cms ortholog CMS_1156 (pseudogene); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> apn:Asphe3_04250(842)32345.2862(476)11-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD ligase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mphl:MPHLCCUG_00892(755)33246.1860(453)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ske:Sked_13060(852)32247.2859(757)6-- K01971  ligD DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arq:BWQ92_08275(859)32543.7856(489)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mft:XA26_13320(758)33644.6856(461)0-- K01971  ligD ligD; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myv:G155_06665(758)33644.6856(464)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpy:Y013_03425(322)32444.4856(188)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cai:Caci_5248(495)34544.6855(396)9-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cwo:Cwoe_4716(815)34044.1855(400)14-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rha:RHA1_ro00015(296)29646.6854(32)9-- K01971  ligD possible DNA-ligase (ATP), C-terminal; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tcu:Tcur_1208(316)31447.8854(745)2-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccap:AES38_10105(833)32745.0851(742)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cry:B7495_07570(833)34945.0850(535)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mne:D174_22685(764)33244.6850(429)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mye:AB431_24205(762)33744.5850(466)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myn:MyAD_22245(764)33244.6850(429)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dtm:BJL86_2779(823)33444.9846(741)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mix:AB663_003164(800)32346.7846(419)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmh:VO01_09615(836)32744.6844()13-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mip:AXH82_00625(659)33446.7843(478)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mim:AKG07_06770(658)34145.7841(428)6-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> micr:BMW26_11320(658)34146.0840(428)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fri:FraEuI1c_4744(558)34943.8838(404)64-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nfr:ERS450000_01148(295)29446.9837(224)0-- K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brx:BH708_17365(857)32645.4836(726)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> frp:AX769_10440(848)33543.0835(459)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psul:AU252_08335(841)32344.6834(440)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mvq:MYVA_4735(759)33744.5828(418)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_05316(761)33743.9827(130)9-- K01971  ligD DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_0881(758)31347.0825(433)5-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mgi:Mflv_1828(766)33644.6824(452)6-- K01971  ligD ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msp:Mspyr1_12280(766)33644.6824(216)8-- K01971  ligD DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_3103(853)32945.3823(205)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msb:LJ00_27545(755)33243.7823(441)8-- K10747  LIG1 ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> msg:MSMEI_5419(762)33243.7823(441)8-- K10747  LIG1  [sp:LIGD_MYCS2] DNA ligase (ATP); K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> msh:LI98_27555(755)33243.7823(441)8-- K10747  LIG1 ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> msm:MSMEG_5570(755)33243.7823(441)8-- K10747  LIG1  [sp:LIGD_MYCS2] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> msn:LI99_27550(755)33243.7823(441)8-- K10747  LIG1 ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> salj:SMD11_5752(317)32045.0823(414)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ntp:CRH09_20900(308)31844.3820(194)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1796(327)31945.5820(432)7-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmi:CMM_2074(832)32743.7819(718)10-- K01971  ligD conserved hypothetical protein/ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO7345(326)32547.4819(395)15-- K01971  ligD SC4G10.24c; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_02570(326)32547.4819(395)16-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strp:F750_2702(324)33045.8818(436)14-- K01971  ligD ligD; ATP-dependent DNA ligase clustered with Ku protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfa:Sfla_4021(324)33045.8817(427)14-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> art:Arth_0294(845)31943.3816(425)5-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD ligase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_0862(326)32547.1816(394)22-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arm:ART_3548(869)32743.4814(712)1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhw:BFN03_13610(767)33644.3814(437)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mkm:Mkms_4438(758)33244.3813(163)11-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD ligase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmc:Mmcs_4352(758)33244.3813(163)9-- K01971  ligD ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pseh:XF36_28235(313)31246.5813(140)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ach:Achl_0520(828)31843.7812(393)6-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...