GFIT result for T03992

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

bbgw:UT28_C0001G0604
(308 a.a.)
 
--
 
K01971  ligD  [tr:A0A0G4B481_9BACT] ATP-dependent DNA ligase, DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> chu:CHU_2837(896)29551.51016()4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)30048.31006()1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)30247.01000()2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)30845.5998()0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)30647.7989(100)5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_3085(299)29446.9984(39)1-- K01971  ligD  [tr:C6W6G0_DYAFD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gem:GM21_0109(872)30345.9982()1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psty:BFS30_17235(871)31748.9979(8)0-- K01971  ligD  [tr:A0A1D7QJB2_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chry:CEY12_12005(623)30647.4973
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_00895(896)30747.6966(32)4-- K01971  ligD  [tr:C6X4K9_FLAB3] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)31147.6964()1-- K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rti:DC20_13500(303)29946.5963
0-- K01971  ligD  [tr:A0A0P0CYM1_9BACT] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)30247.0961()2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_01435(900)30746.9960(2)0-- K01971  ligD  [tr:A0A0S3FNK5_9FLAO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)28949.5960()2-- K01971  ligD  [tr:Q6MA42_PARUW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_6404(646)30845.8954(24)3-- K01971  ligD  [tr:C7PJP8_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjg:BB050_02761(853)31646.8950()0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_05350(623)29648.0949(5)3-- K01971  ligD  [tr:A0A0G3LZV4_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphn:BV902_20470(912)30346.9949()0-- K01971  ligD  [tr:A0A1P8E974_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)29847.7949()1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_01115(881)29547.1948(84)0-- K01971  ligD  [tr:A0A0P0U5U7_FLAPS] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)30445.4948()0-- K01971  ligD  [tr:A0A142HPY3_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpip:CJF12_16755(628)29547.1945
0-- K01971  ligD  [tr:A0A086BLV6_9FLAO] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfo:GFO_0300(802)30945.3943()0-- K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> muc:MuYL_0888(910)30444.7940()0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)30446.1938()0-- K01971  ligD  [tr:A0A172TV90_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)29345.4929()1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)30844.2925()0-- K01971  ligD  [tr:A0A0U5JG24_9BACT] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cio:CEQ15_15855(625)30245.0923
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcm:AY601_3223(882)30944.7923()0-- K01971  ligD  [tr:A0A127VFJ5_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> flu:CHH17_05575(862)30445.4920()0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)29446.3919()0-- K01971  ligD  [tr:F8KYR4_PARAV] putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)30443.8918()1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_2087(804)30143.2915(210)0-- K01971  ligD  [tr:A0A1L7I5D3_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asl:Aeqsu_3115(807)30845.1909()1-- K01971  ligD  [tr:I3YZY2_AEQSU] ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grl:LPB144_07705(802)29844.6901()0-- K01971  ligD  [tr:A0A1L3J570_9FLAO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pep:AQ505_21600(916)30545.6898()0-- K01971  ligD  [tr:A0A0P0NL85_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)29448.0896()0-- K01971  ligD  [tr:W0EYS4_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scn:Solca_1673(810)29046.6892()1-- K01971  ligD  [tr:H8KQK1_SOLCM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fgi:OP10G_3151(680)30642.2889(352)2-- K01971  ligD  [tr:A0A068NXY8_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbal:M667_13175(808)30244.0879()1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> marm:YQ22_16380(805)30244.0878()0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pgs:CPT03_07335(844)29244.5873()0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salt:AO058_01020(819)29741.8865()0-- K01971  ligD  [tr:A0A1L6QZ30_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> camu:CA2015_1090(810)30942.1863()1-- K01971  ligD  [tr:A0A0H4PQK2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)30943.4863(758)0-- K01971  ligD  [tr:A0A1A9I261_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)29241.1859(125)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmr:Cycma_1183(808)29844.0853()1-- K01971  ligD  [tr:G0IY51_CYCMS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)28843.8836
0-- K01971  ligD  [tr:F6CIP8_DESK7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psn:Pedsa_1057(822)30844.2834()1-- K01971  ligD  [tr:F0SBI2_PSESL] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1510(300)28640.9818
0-> K01971  ligD  [tr:D7CNI8_SYNLT] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sht:KO02_10895(829)30442.1808()1-- K01971  ligD  [tr:A0A088EYC0_9SPHI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1124(303)29339.9805
0-> K01971  ligD  [tr:Q0AXX0_SYNWW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0250(297)28638.5801
0-> K01971  ligD  [tr:D9S0A8_THEOJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hor:Hore_03410(313)28540.7795
0-> K01971  ligD  [tr:B8D1M5_HALOH] DNA polymerase LigD polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_2082(306)30940.5791(71)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)29440.8785
0-> K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tjr:TherJR_1553(301)28640.2782
0-> K01971  ligD  [tr:D5XFI5_THEPJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)29340.3772(231)15-- K01971  ligD  [tr:W0RSS2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1522(302)28140.9769
0-- K01971  ligD  [tr:F6B6K3_DESCC] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)29338.9759(157)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_1986(303)29740.1748
0-- K01971  ligD  [tr:A4J601_DESRM] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfg:B0537_09850(302)28241.1746
0-- K01971  ligD  [tr:A0A1S6IX65_9FIRM] DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pth:PTH_1244(323)28536.1723
0-> K01971  ligD  [tr:A5D2W2_PELTS] predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chy:CHY_0025(293)28740.1716(158)1-> K01971  ligD  [tr:Q3AG37_CARHZ] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dec:DCF50_p2127(305)29440.5710
0-> K01971  ligD  [tr:K4L3M4_9FIRM] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ded:DHBDCA_p2113(305)29440.5710
0-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sth:STH1795(307)29137.1705
1-- K01971  ligD  [tr:Q67NG3_SYMTH] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dau:Daud_0598(314)29038.3701
0-- K01971  ligD  [tr:B1I253_DESAP] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sur:STAUR_6997(836)27836.7692()8-- K01971  ligD  [tr:Q09E36_STIAD] ligD; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drs:DEHRE_05390(294)30138.9686
0-> K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nth:Nther_0139(306)30036.0681(563)0-> K01971  ligD  [tr:B2A484_NATTJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> opr:Ocepr_0487(299)28235.5678
1-- K01971  ligD  [tr:E4U673_OCEP5] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> taa:NMY3_00137(993)33937.2678()0-- K01971  ligD  [tr:A0A0N9Y8S8_9ARCH] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)28036.4677
0-> K01971  ligD  [tr:A0A0S2TFP3_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1861(304)28337.1674
0-- K01971  ligD  [tr:F6DU47_DESRL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_00960(763)29136.1672(106)8-- K01971  ligD  [tr:A0A0K1PLM9_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aau:AAur_2008(414)28738.0671(145)3-- K01971  ligD  [tr:A1R691_PAEAT] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arr:ARUE_c21610(414)28738.0671(195)5-- K01971  ligD  [tr:J7LNU1_9MICC] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psul:AU252_22475(414)28737.6671(132)0--     [tr:A0A0U3QA04_9MICC] DNA polymerase
> samy:DB32_001215(465)29036.9670(189)11--     [tr:A0A0F6YHI1_9DELT] ATP-dependent DNA ligase
> src:M271_07565(334)29435.0668(126)10->     [tr:A0A0A0NAI2_9ACTN] ATP-dependent DNA ligase
> ccro:CMC5_008840(566)28536.5666
12-- K01971  ligD  [tr:A0A0K1E862_CHOCO] ligC; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccx:COCOR_00956(852)27534.9665()7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> msd:MYSTI_01057(341)27234.6663
36-- K01971  ligD  [tr:L7U0S6_MYXSD] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plh:VT85_02045(484)27836.0663
0-- K01971  ligD  [tr:A0A142YAI4_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)27535.3661(122)1-- K01971  ligD  [tr:A5ETW7_BRASB] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> clb:Clo1100_0394(303)29535.6661
0-> K01971  ligD  [tr:H2JI29_9CLOT] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> art:Arth_3426(414)28737.3659(141)5--     [tr:A0K0I1_ARTS2] conserved hypothetical protein
> ank:AnaeK_0932(737)29235.3658(62)245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2516(323)28537.5657
0-> K01971  ligD  [tr:A0A0K2SMK4_9FIRM] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033620(298)28238.7656(550)0-> K01971  ligD  [tr:A0A075R759_BRELA] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agy:ATC03_05305(411)29436.7655(97)0--     [tr:A0A191WDC4_9MICO] DNA polymerase
> arq:BWQ92_13890(414)28736.9655(161)0--     [tr:A0A1P8M3G6_9MICC] DNA polymerase domain-containing protein
> svl:Strvi_3580(334)29434.0655(101)9--     [tr:G2PEB7_STRVO] DNA polymerase LigD, polymerase domain protein
> tmr:Tmar_1127(316)27534.5655
4-> K01971  ligD  [tr:E6SKN2_THEM7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afs:AFR_34555(319)28937.7654(42)4--     [tr:U5W830_9ACTN] DNA polymerase LigD, polymerase domain-containing protein
> dmt:DESME_11390(293)29334.1654
0-> K01971  ligD  [tr:W0EEN1_9FIRM] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hoh:Hoch_6628(358)29536.3651(34)2--     [tr:D0LRV2_HALO1] DNA primase small subunit
> noa:BKM31_02930(400)27737.5651(53)0--     [tr:A0A1U9ZRM6_9ACTN] DNA polymerase domain-containing protein
... ... ...