GFIT result for T00528

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

bbt:BBta_7782
(351 a.a.)
 
--
 
    putative ATP-dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> lok:Loa_02405(334)32551.41193(466)1<-    DNA polymerase LigD, ligase domain protein
> tee:Tel_12770(335)32054.71183
0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amyc:CU254_25885(314)31054.81170(654)0<-    ATP-dependent DNA ligase
> amd:AMED_5204(314)31155.31140(693)6<-    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)31155.31140(693)6<-    lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)31155.31140(693)6<-    ATP-dependent DNA ligase
> amz:B737_5142(314)31155.31140(693)6<-    lig; ATP-dependent DNA ligase
> rci:RCIX1968(353)33949.91124(854)3<-    predicted ATP-dependent DNA ligase
> mav:MAV_3148(332)32651.51118(523)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(332)32651.51118(522)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)32651.51118(522)2--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)32651.51118(522)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)33350.81114(519)0--    hypothetical protein
> mao:MAP4_2518(332)32651.21113(518)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)32651.21113(518)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)32651.21113(518)3--    ATP-dependent DNA ligase
> sen:SACE_5682(333)32751.41104(607)7--    DNA ligase, ATP-dependent
> ngv:CDO52_22145(317)31451.61075(778)0<-    ATP-dependent DNA ligase
> mmal:CKJ54_13680(332)32649.71071(480)0<-    ATP-dependent DNA ligase
> myo:OEM_29110(332)32649.71068(454)3<-    DNA polymerase LigD ligase subunit
> mia:OCU_29800(332)32649.71065(451)3<-    DNA polymerase LigD ligase subunit
> mchi:AN480_15575(332)32649.41060(446)0<-    ATP-dependent DNA ligase
> mie:LG41_14150(332)32649.71060(446)4<-    ATP-dependent DNA ligase
> mir:OCQ_30550(332)32649.71060(446)3<-    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)32649.71060(446)3<-    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)32649.71060(446)3<-    DNA polymerase LigD ligase subunit
> mpd:MCP_2126(334)32547.41056(781)1<-    putative ATP-dependent DNA ligase
> pmad:BAY61_01235(306)30551.81051(398)0<-    ATP-dependent DNA ligase
> svl:Strvi_5345(337)30652.61045(668)8--    DNA polymerase LigD, ligase domain protein
> spun:BFF78_39610(336)32750.51043(613)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hbe:BEI_0347(334)32149.51026
0<- K01971  ligD ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sct:SCAT_5457(313)31348.6987(670)3--    ligD; DNA polymerase LigD, ligase domain
> scy:SCATT_54560(327)31348.6987(670)4--    DNA polymerase LigD ligase subunit
> sals:SLNWT_5554(334)32848.5975(635)5-- K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_166(342)31344.1933(634)0<-    ATP-dependent DNA ligase
> blin:BLSMQ_1369(316)31047.7922(328)0<-    ATP-dependent DNA ligase
> hco:LOKO_00656(851)35341.9860()0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)32242.5845()0-- K01971  ligD putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)32344.0834(456)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)31444.3820(125)5-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)32643.9811(459)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)31941.4808()0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)33842.6808(486)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfu:CFU_1974(830)32141.4805(632)1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)31742.3798(583)7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_01115(881)32340.9788(128)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pol:Bpro_3003(882)33040.6786(623)2-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_09606(855)34940.7783(173)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rta:Rta_07780(819)32540.6777(434)29-- K01971  ligD ATP-dependent DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aaa:Acav_2693(936)33940.7775(489)28-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)32040.9775(510)1-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)32040.9775(510)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)33740.4774(440)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)32940.4774()0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)31041.0773(403)0-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)32342.1773(450)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nlc:EBAPG3_007500(847)35640.2770()0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfw:PF1751_v1c25520(819)32640.5770(511)1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)32140.5769(86)5-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ajs:Ajs_2523(837)33442.2765(474)10-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmc:LMI_2571(822)31238.1765()0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pff:PFLUOLIPICF724270(819)32640.2763(502)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> moc:BB934_16235(861)34039.7760(8)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_0282(237)23250.9758(124)5--    lig; DNA ligase, ATP-dependent
> aex:Astex_1372(847)32742.2756(452)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)31640.8756(392)2-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jsv:CNX70_19225(829)31639.6755(466)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)33041.2754(472)85-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpy:BA022_07305(837)31742.3753(461)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcai:K788_0007984(961)32639.6752(249)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sva:SVA_1768(815)35039.7752(430)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aza:AZKH_2968(851)32142.4751()0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> adt:APT56_19400(885)31843.7750(432)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmu:Nmul_A1177(853)32139.9750()0-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmk:MDS_2413(842)34239.8750(422)2-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mass:CR152_22400(858)33239.2749(447)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_02363(284)31241.0747(10)0<- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pter:C2L65_08420(952)32639.3747(107)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mnr:ACZ75_08315(832)31639.9743(452)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ote:Oter_4309(603)36239.2743(362)5<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)33039.1742(459)2-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jaz:YQ44_08770(835)34038.2742(438)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfb:VO64_0156(832)34338.5741(491)1-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhy:RD110_14845(830)33241.6741(430)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)33840.8740(427)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vaa:AX767_14310(838)34838.2740(422)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aau:AAur_0283(851)34140.8739(372)6-- K01971  ligD ATP-dependent DNA ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfs:PFLU_2911(838)32439.8739(449)3-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)33738.9739()0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmy:Pmen_3217(837)31541.6739(403)4-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arr:ARUE_c02810(852)34141.9738(385)7-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)31740.4738()1-- K01971  ligD unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> apn:Asphe3_04250(842)32040.9737(382)11-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD ligase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phs:C2L64_08955(958)32639.0737(147)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> poi:BOP93_13240(841)33338.7736(475)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daf:Desaf_0308(931)33639.9735()3-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vap:Vapar_1660(847)32640.2734(407)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbm:CL52_09565(845)33339.0733(450)4-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfc:PflA506_2574(837)33039.4732(18)4-- K01971  ligD ligD_1; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axs:LH59_19425(868)31741.6731(384)19-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...