GFIT result for T04939

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

bfm:BP422_13605
(300 a.a.)
 
--
 
K01971  ligD  DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> bbe:BBR47_36590(300)30095.71926
0<> K01971  ligD  [tr:C0ZFS7_BREBN] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033620(298)29763.01270
0-> K01971  ligD  [tr:A0A075R759_BRELA] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ntr:B0W44_14280(299)29552.21051
0-- K01971  ligD  [tr:A0A1U9K9P7_9BACL] DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plv:ERIC2_c03270(301)28753.01007
0-- K01971  ligD  [tr:V9W2K7_9BACL] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tab:CIG75_09945(309)29948.8943
0-- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnp:IJ22_50340(302)29248.3939
0-- K01971  ligD  [tr:A0A0U2M9R5_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paef:R50345_04765(294)28049.6930
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baco:OXB_3302(607)28747.4925
0-- K01971  ligD  [tr:A0A0A8JMU5_BACSX] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bon:A361_18415(612)30845.5922
0-- K01971  ligD  [tr:A0A160MEP7_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paej:H70737_05035(294)28748.8920
0-- K01971  ligD  [tr:A0A089IIA5_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pri:PRIO_1233(294)28049.3920
0-- K01971  ligD  [tr:A0A0E4H8L6_9BACL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpf:BpOF4_18445(578)28547.7916
0-- K01971  ligD  [tr:D3FS95_BACPE] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pod:PODO_04905(294)28049.6913
0-- K01971  ligD  [tr:A0A1R0WTA3_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bhk:B4U37_07665(616)28645.5912
0-- K01971  ligD  [tr:A0A1Y0CLG3_9BACI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pib:BBD41_19405(305)27349.8911
0-- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bag:Bcoa_3265(613)28348.1910
0-- K01971  ligD  [tr:G2TMD9_BACCO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paee:R70331_04850(294)28049.3907
0-- K01971  ligD  [tr:A0A089KP77_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbd:PBOR_05790(295)28249.6906
0-- K01971  ligD  [tr:A0A089LBI8_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeh:H70357_05705(294)28048.9904(801)0-- K01971  ligD  [tr:A0A089HVZ3_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paen:P40081_06065(294)28050.4904
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pih:UB51_17835(294)27348.7904
0-- K01971  ligD  [tr:A0A0D3VE87_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeq:R50912_05375(294)28649.7903
0-- K01971  ligD  [tr:A0A089JVK0_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmet:BMMGA3_09875(609)28547.0902
0-- K01971  ligD  [tr:I3E9F3_BACMT] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdu:PDUR_06230(294)28048.6901
0-- K01971  ligD  [tr:A0A089HI07_PAEDU] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdh:B9T62_38390(294)28047.9900
0-- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bif:N288_15905(612)28745.3899
0-- K01971  ligD  [tr:U5LC79_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bck:BCO26_1265(613)28347.0895
0-- K01971  ligD  [tr:F7Z7D1_BACC6] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pgm:PGRAT_05830(294)28047.9891
0-- K01971  ligD  [tr:A0A089NDZ2_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pjd:Pjdr2_4985(304)30244.4891
0-- K01971  ligD  [tr:C6D0J7_PAESJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paea:R70723_04810(294)28047.9888
0-- K01971  ligD  [tr:A0A089KAB2_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drs:DEHRE_05390(294)29146.4884
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gym:GYMC10_5317(305)27348.7884
0-- K01971  ligD  [tr:D3EG05_GEOS4] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psab:PSAB_04965(294)27648.2883
0-- K01971  ligD  [tr:X4ZW24_9BACL] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dec:DCF50_p2127(305)27348.0882
0-- K01971  ligD  [tr:K4L3M4_9FIRM] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ded:DHBDCA_p2113(305)27348.0882
0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baci:B1NLA3E_13055(622)28746.3877
0-- K01971  ligD  [tr:N0AT41_9BACI] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bco:Bcell_3194(413)26647.0873
0-- K01971  ligD  [tr:E6U0J1_BACCJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pms:KNP414_07351(306)29246.6873(107)1-- K01971  ligD  [tr:F8FPP1_PAEMK] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmq:PM3016_6911(306)29246.2870(476)2-- K01971  ligD  [tr:H6NQP0_9BACL] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmw:B2K_34865(306)29246.2870(106)1-- K01971  ligD  [tr:I0BTY1_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppm:PPSC2_05990(300)27348.4870
0-- K01971  ligD  [tr:E3EIA8_PAEPS] ykoU; DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppo:PPM_1132(300)27348.4870
0-- K01971  ligD ykoU; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppoy:RE92_05895(300)27348.4870
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tco:Theco_3020(299)28847.2869
2-- K01971  ligD  [tr:L0EHB3_THECK] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcoa:BF29_289(613)28345.9866
0-- K01971  ligD  [tr:A0A0B5X848_BACCO] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpum:BW16_09190(621)28646.5862
0-- K01971  ligD  [tr:W8QWG2_BACPU] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsm:BSM4216_2198(607)27247.4862
0-- K01971  ligD  [tr:A0A0H4P4S4_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppq:PPSQR21_012210(300)27347.6862
0-- K01971  ligD DNA polymerase ligd, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pow:IJ21_43260(298)29546.1861
0-- K01971  ligD  [tr:A0A0U2UTX0_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pxl:BS614_10435(296)27347.3860
0-- K01971  ligD  [tr:A0A1L5LLX1_9BACL] DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pswu:SY83_12925(296)27945.9859
0-- K01971  ligD  [tr:A0A172TJ02_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pste:PSTEL_06010(293)28047.9858
0-- K01971  ligD  [tr:A0A089LU17_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gst:HW35_02605(609)26746.1855
0-- K01971  ligD  [tr:A0A077J3M5_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pta:HPL003_14050(300)27347.3851
0-- K01971  ligD  [tr:G7W0E0_PAETH] eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppeo:ABE82_06100(300)27347.6850
0-- K01971  ligD  [tr:A0A0K2F5F5_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppol:X809_06005(300)27347.6850
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppy:PPE_01161(300)27347.6850
0-- K01971  ligD  [tr:E0RM81_PAEP6] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbj:VN24_04100(301)29145.7847
0-- K01971  ligD  [tr:A0A0D5NG40_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ble:BleG1_3934(601)28946.7846
0-- K01971  ligD  [tr:A0A060LZ04_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> siv:SSIL_2188(613)28444.7846
0-- K01971  ligD  [tr:F2F5S8_SOLSS] predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacw:QR42_08520(610)26648.1842
0-- K01971  ligD  [tr:A0A0B4S8F3_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssil:SOLI23_07720(611)28444.4840
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lsp:Bsph_3075(605)28245.4839
1-- K01971  ligD  [tr:B1HPE2_LYSSC] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sob:CSE16_07755(609)28542.1839
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lfu:HR49_10880(605)28246.1836
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> apak:AP3564_11545(599)24049.6833
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pyg:AWM70_01385(296)29944.8832
0-- K01971  ligD  [tr:A0A1B1MW40_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bgy:BGLY_1426(615)28645.8830
0-- K01971  ligD  [tr:A0A1C3SC29_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxi:BK049_18310(621)28643.7829
0-- K01971  ligD  [tr:K2NY87_9BACI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lgy:T479_10330(605)28841.7824
0-- K01971  ligD  [tr:X2GST2_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpu:BPUM_1666(621)26647.0822
0-- K01971  ligD  [tr:A8FDM8_BACP2] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blh:BaLi_c15730(616)28645.8813
0-- K01971  ligD  [tr:R9TTG2_9BACI] ykoU; ATP-dependent DNA ligase subunit YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bha:BH2209(611)28344.2809
0-- K01971  ligD  [tr:Q9KAS8_BACHD] BH2209; unknown conserved protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bld:BLi01494(616)28545.6809(699)1-- K01971  ligD ykoU; ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bli:BL03626(616)28545.6809(699)1-- K01971  ligD  [tr:Q65KL9_BACLD] ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpus:UP12_08580(621)26645.9803
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> csd:Clst_1549(290)28640.9795
0-- K01971  ligD ligD1; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bkw:BkAM31D_15790(549)22450.0791
0-- K01971  ligD  [tr:A0A1X9MCN1_9BACI] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hhd:HBHAL_4934(589)29041.7789
0-- K01971  ligD  [tr:I0JSZ9_HALH3] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lao:AOX59_15425(602)30041.7785
0-- K01971  ligD  [tr:A0A0U4FH55_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cce:Ccel_0366(304)28042.5783
0-- K01971  ligD  [tr:B8I5T4_CLOCE] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vir:X953_17615(598)29540.0782
1-- K01971  ligD  [tr:A0A075JXD0_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsj:UP17_14025(614)29142.6780
0-- K01971  ligD  [tr:A0A127D8K9_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> clb:Clo1100_0394(303)29641.2777
0-- K01971  ligD  [tr:H2JI29_9CLOT] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamn:BASU_1275(611)28143.1776
0-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vhl:BME96_17105(598)29540.0775
0-- K01971  ligD  [tr:A0A1J0H5R2_VIRHA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamy:V529_12680(611)28142.7774
1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamf:U722_07040(611)28142.7773
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bami:KSO_012785(611)28142.7773
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baq:BACAU_1295(607)28142.7773
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bama:RBAU_1296(611)28142.7772
1-- K01971  ligD  [tr:S6FJH1_9BACI] ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamb:BAPNAU_2446(607)28142.7772
1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamc:U471_13370(611)28142.7772
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baml:BAM5036_1253(611)28142.7772
0-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamp:B938_06845(611)28142.7772
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamt:AJ82_07560(611)28142.7772
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bay:RBAM_013180(611)28142.7772
0-- K01971  ligD  [tr:A7Z3V5_BACVZ] ykoU; YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmp:NG74_01370(611)28142.7772
0-- K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvm:B9C48_06745(611)28142.7772
0-- K01971  ligD  [tr:A0A1W6HHD3_BACVA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bwh:A9C19_12900(610)26043.8772
0-- K01971  ligD  [tr:A0A1L3MTB8_9BACI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...