GFIT result for T04458

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

byl:A4V09_04265
(310 a.a.)
 
--
 
K01971  ligD  DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> erb:A4V01_12235(310)31053.91097
0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> csh:Closa_3638(308)31151.41077(20)1-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ofo:BRW83_1415(318)31046.8927
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1852(316)31337.4673
1->    DNA polymerase LigD, ligase domain protein
> mta:Moth_1488(320)31437.9666
1-> K10747  LIG1 ATP dependent DNA ligase, central; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pth:PTH_1243(324)31636.7665
1-> K01971  ligD CDC9; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afu:AF_1725(313)31438.9656(364)1-> K01971  ligD DNA ligase, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ave:Arcve_0209(324)31837.1656(345)1-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_2002(316)31735.0655
0-> K10747  LIG1 ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> dgi:Desgi_1818(322)31037.7651
1-> K01971  ligD DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afg:AFULGI_00019760(303)30837.7634(342)1-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1165(316)31035.8626
0->    DNA polymerase LigD, ligase domain protein
> ast:Asulf_01568(331)31836.2605(311)1-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tki:TKV_c19040(307)30535.1600
0-> K01971  ligD ligD; end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0983(318)30935.0599(486)0->    DNA polymerase LigD, ligase domain protein
> tbo:Thebr_0487(307)30534.8596
0-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tpd:Teth39_0475(307)30534.8596
0-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tex:Teth514_0952(307)30534.8595
0-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> thx:Thet_1965(307)30534.8595
0-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> twi:Thewi_2144(307)30535.1595
0-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tto:Thethe_00683(307)31234.6591
0-> K01971  ligD ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tit:Thit_1868(307)30535.1590
0-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmt:Tmath_1843(307)30535.1590
0-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tid:Thein_1426(302)28135.2589
0-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puf:UFO1_2618(326)31635.4587
0-> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gah:GAH_01512(327)31434.4582(288)1-> K01971  ligD DNA ligase D, ligase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsh:Tsac_1306(307)31133.8579
0-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> txy:Thexy_0579(307)30534.4579
0-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcj:MCON_3253(315)31334.8576(310)1-> K10747  LIG1 ligD; DNA polymerase LigD, putative; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> chu:CHU_2837(896)31434.1575(368)4-> K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_09765(682)32434.6557(27)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ttm:Tthe_0704(307)31233.3556
0-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfo:GFO_0300(802)31235.3554(363)0-> K01971  ligD ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chry:CEY12_12005(623)30734.9549
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grl:LPB144_07705(802)30833.1549
0-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tum:CBW65_10305(351)30433.9549(20)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmr:Tmar_1128(344)31133.4548
20->    DNA polymerase LigD, ligase domain protein
> muc:MuYL_0888(910)32533.2546(349)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbgw:UT28_C0001G0605(500)31031.9545
0-> K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)31434.4541
0-> K01971  ligD putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)31735.3539(351)0-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)30833.4537
1-> K01971  ligD ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)30831.8536(276)0-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0249(308)28132.4535
0-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salt:AO058_01020(819)31134.4531(306)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_00895(896)32233.9528(83)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_15345(891)32533.2527(66)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7782(351)31031.6524(124)3--    putative ATP-dependent DNA ligase
> fla:SY85_09220(907)31233.0524(297)0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psty:BFS30_24365(919)32834.8524(4)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_17065(904)32133.3522(14)5-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2515(320)31836.2522
0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)31534.3519
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbi:Tbis_2338(321)31132.2514(175)3-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpip:CJF12_16755(628)30932.4512(286)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)31034.8511(214)2-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_166(342)31533.0510(273)0--    ATP-dependent DNA ligase
> pgs:CPT03_07335(844)32230.7509(282)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)32732.4508(273)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)30931.4507(3)5-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)30932.0507(407)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psn:Pedsa_1057(822)30831.8506(290)1-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1509(312)26232.1506
0-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bly:A2T55_13945(852)31932.0504
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmr:Cycma_1183(808)30834.4502(302)1-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_0365(902)32734.3502(318)2-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)32633.1502
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tpz:Tph_c09930(320)31229.5500(398)0-- K01971  ligD ligD2; ATP dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cio:CEQ15_15855(625)30932.0499
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_3103(853)32231.1498(108)0-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sth:STH1797(312)28233.3498
4-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)31134.1497(112)78-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strc:AA958_07435(334)32131.8495(154)9-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> camu:CA2015_1090(810)31533.3494(256)1-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphn:BV902_20470(912)32631.9494(255)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)31032.6492
2-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svi:Svir_34920(477)31432.5492(137)2-- K01971  ligD DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_2087(804)30630.1491(255)0-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hoh:Hoch_3330(896)31134.1490(208)65-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_05332(602)32431.8489(19)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)32633.1489(313)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)31931.0488(163)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> roa:Pd630_LPD04033(313)29834.6488(126)8-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> taa:NMY3_00137(993)35030.3487(241)0-> K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pep:AQ505_21600(916)32732.4486(49)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tab:CIG75_09940(318)31231.4486
0-> K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ele:Elen_1951(822)30034.3485(385)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)31135.0485
1-> K01971  ligD ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_00676(320)31034.5483
0-> K01971  ligD ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1968(353)30632.0482(243)3--    predicted ATP-dependent DNA ligase
> asl:Aeqsu_3115(807)31231.1481(266)1-> K01971  ligD ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)31232.7481(44)3-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dti:Desti_0132(536)31132.8480
0--    DNA ligase D/DNA polymerase LigD
> hor:Hore_03420(285)29435.0480
0-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcm:AY601_3223(882)32131.2480(263)0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fgi:OP10G_3151(680)32333.1479(160)2-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppoy:RE92_10045(316)30533.4479(281)1-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgy:Sgly_0962(813)30134.6479
0-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_09810(315)31333.9477(24)6--    DNA ligase
> bju:BJ6T_19970(315)31333.9477(24)8--    hypothetical protein
... ... ...