GFIT result for T01780

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ccx:COCOR_00956
(852 a.a.)
 
--
 
    [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> sur:STAUR_6997(836)85266.03731(3470)8-- K01971  ligD  [tr:Q09E36_STIAD] ligD; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> age:AA314_02665(854)85859.03208(2727)5-- K01971  ligD  [tr:A0A0G2ZQM1_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)86941.41900(668)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)85239.21843
0-- K01971  ligD  [tr:A0A0U3LYM1_9BURK] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gem:GM21_0109(872)87338.11821(1716)1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)87937.91818
2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)85239.21816(1592)1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)85239.21816(1592)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhz:RHPLAN_34800(859)86137.61816(1230)0-- K01971  ligD  [tr:A0A127EUJ3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mamo:A6B35_04445(841)84838.81812(172)0-- K01971  ligD  [tr:G6Y5E4_9RHIZ] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)85936.71812
0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)88938.01801(1692)2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bop:AXW83_17900(850)84739.41797(316)0-- K01971  ligD  [tr:A0A126P200_9BRAD] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_22120(898)89836.31785(11)0-- K01971  ligD  [tr:A0A142X1L6_9PLAN] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)86939.11784(1684)7-- K01971  ligD  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> adt:APT56_19400(885)87439.41782(1430)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vpe:Varpa_0532(869)86438.31778(114)9-- K01971  ligD  [tr:E6V5E7_VARPE] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agc:BSY240_2160(862)86737.91772(1543)0-- K01971  ligD  [tr:A0A1B3NZS8_9RHIZ] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcm:AY601_3223(882)88336.81772(1503)0-- K01971  ligD  [tr:A0A127VFJ5_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)86837.41771(576)3-- K01971  ligD  [tr:C7PLF2_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axo:NH44784_059851(870)86438.01766(1407)23-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)85638.81765(1656)5-- K01971  ligD  [tr:D8NY76_RALSL] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)84838.11763(194)4-- K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axs:LH59_19425(868)85538.01762(1415)19-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI0169(856)86938.41756(1647)4-- K01971  ligD  [tr:A9H268_GLUDA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_2814(837)87336.71756(198)12-- K01971  ligD  [tr:W6RDU4_9RHIZ] ligD; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_02590(830)86038.71755(218)0-- K01971  ligD  [tr:A0A0X8IV37_RHIRD] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axn:AX27061_4222(874)86937.61753(1388)35-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axx:ERS451415_04244(874)86937.61753(1388)0-- K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)85237.01751(1523)1-- K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)87037.21750(158)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)84338.91749(1524)2-- K01971  ligD  [tr:A0A0K2BE58_9BURK] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_17065(904)90037.01748(22)5-- K01971  ligD  [tr:A0A0G3M4L8_9FLAO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll4606(829)86238.21747(148)11-- K01971  ligD  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)92235.51746(565)5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)85138.01743(1641)1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> por:APT59_10325(858)86938.21742(1551)0-- K01971  ligD  [tr:A0A0U4VN59_9PSED] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)84737.91735(105)6-- K01971  ligD  [tr:E8TFS2_MESCW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vaa:AX767_14310(838)85838.11734(1521)0-- K01971  ligD  [tr:A0A126ZG35_9BURK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_27290(850)85038.61733(196)0-- K01971  ligD  [tr:A0A1A9GBZ5_9RHIZ] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfc:PflA506_1430(853)86136.91731(150)2-- K01971  ligD  [tr:I2BUW1_PSEFL] ligD_2; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_CH0000692(835)85537.91731(241)6-- K01971  ligD  [tr:B3PPH4_RHIE6] probable ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsc:RCFBP_20893(870)87038.61731
15-- K01971  ligD  [tr:D8NP23_RALSL] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pol:Bpro_3003(882)86637.81727(1543)2-- K01971  ligD  [tr:Q128X5_POLSJ] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)88835.21726(1481)4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cnc:CNE_2c23180(913)87138.11724(144)13-- K01971  ligD  [tr:F8GTV0_CUPNN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dts:BI380_07525(892)84636.51720(208)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pep:AQ505_21600(916)90436.31720(1155)0-- K01971  ligD  [tr:A0A0P0NL85_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rmn:TK49_07020(873)86738.61720(1500)1-- K01971  ligD  [tr:A0A0D5AP76_9RALS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)87237.61718(1385)3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)84835.61718(1449)2-- K01971  ligD  [tr:Q6MA42_PARUW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpi:Rpic_0501(863)87438.61715(1614)2-- K01971  ligD  [tr:B2UGG9_RALPJ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)85939.21713(1425)6-- K01971  ligD  [tr:D7A5M0_STAND] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)85736.41712(1467)0-- K01971  ligD  [tr:A0A1A9I261_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_09757(830)84937.81711(159)3-- K01971  ligD  [tr:F0LE72_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)85837.41711
1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> reh:H16_B2352(910)86837.41709(1564)13-- K01971  ligD  [tr:Q0JYP0_CUPNH] h16_B2352; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsh:Rsph17029_1337(868)86237.01709(1427)6-- K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpf:Rpic12D_0488(867)87538.31708
0-- K01971  ligD  [tr:C6BCT3_RALP1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsp:RSP_2679(868)86336.81708(1428)8-- K01971  ligD  [tr:Q3J300_RHOS4] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> reu:Reut_B5079(901)85737.51705(97)3-- K01971  ligD  [tr:Q46R07_CUPPJ] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)84937.61703(1053)3-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_00895(896)88935.01703(594)4-- K01971  ligD  [tr:C6X4K9_FLAB3] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psc:A458_10100(854)87237.31702(1234)1-- K01971  ligD  [tr:I4CT52_PSEST] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)90335.11700(1466)0-- K01971  ligD  [tr:A0A142HPY3_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pstu:UIB01_11265(854)87237.21700(1247)2-- K01971  ligD  [tr:A0A023WTK2_PSEST] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)84836.21700
0-- K01971  ligD  [tr:F8KYR4_PARAV] putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oah:DR92_3927(834)85637.61699(1113)2-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oan:Oant_4315(834)85637.61699(1456)1-- K01971  ligD  [tr:A6X711_OCHA4] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psv:PVLB_14550(822)85438.31699
0-- K01971  ligD  [tr:U5VFX4_9PSED] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axy:AXYL_00438(842)85036.81698(23)3-- K01971  ligD  [tr:E3HUH3_ACHXA] ligD1; DNA ligase D 1; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vap:Vapar_1660(847)85536.81696(1194)9-- K01971  ligD  [tr:C5CTW0_VARPS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)89636.31695(1411)0-- K01971  ligD  [tr:A0A172TV90_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)84836.21692(1586)0-- K01971  ligD  [tr:A0A0X8HBT1_9GAMM] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)85738.01691(1376)1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)85236.91690
0-- K01971  ligD  [tr:W0EYS4_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_0365(902)89736.21689(1084)2-- K01971  ligD  [tr:C6VYF5_DYAFD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfv:Psefu_2816(852)85037.21689(1578)4-- K01971  ligD  [tr:F6AI24_PSEF1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vpd:VAPA_1c17500(851)85637.31689(1192)4-- K01971  ligD  [tr:T1X8H8_VARPD] putative DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> del:DelCs14_2489(875)85435.81688(1468)10-- K01971  ligD  [tr:F6B0K4_DELSC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmu:Nmul_A1177(853)86837.41688
0-- K01971  ligD  [tr:Q2Y9U1_NITMU] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)87636.21688(1475)1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dac:Daci_4339(871)85435.91687(1472)10-- K01971  ligD  [tr:A9BWY5_DELAS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> deq:XM25_14700(857)84836.41687(160)3-- K01971  ligD  [tr:A0A0K0TZ58_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psty:BFS30_24365(919)91035.51687(0)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cti:RALTA_B2120(916)87236.51685(23)19-- K01971  ligD  [tr:B3RCS2_CUPTR] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppv:NJ69_06730(825)85336.91685(1468)1-- K01971  ligD  [tr:A0A0A7JJE5_9PSED] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_01435(900)89736.51683(477)0-- K01971  ligD  [tr:A0A0S3FNK5_9FLAO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pput:L483_17380(833)85437.61683(93)1-- K01971  ligD  [tr:R9V746_PSEPU] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azo:azo1741(881)85238.31682(1426)7-- K01971  ligD  [tr:A1K6A3_AZOSB] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psa:PST_2130(851)87236.91681(1225)4-- K01971  ligD  [tr:A4VLE4_PSEU5] DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psz:PSTAB_2018(851)87236.81681(1231)2-- K01971  ligD  [tr:F8HAP9_PSEUT] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsk:RSKD131_0994(877)86336.71681(1397)10-- K01971  ligD  [tr:B9KRR2_RHOSK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pen:PSEEN2767(820)85538.61680
3-- K01971  ligD  [tr:Q1I9X2_PSEE4] putative DNA ligase, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)89934.71680(1446)1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppud:DW66_2974(830)85437.21679(1578)3-- K01971  ligD  [tr:A0A059V1W0_PSEPU] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsq:Rsph17025_1218(846)84937.01678(1408)5-- K01971  ligD  [tr:A4WRV5_RHOS5] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spmi:K663_11060(830)86936.81678(1378)0-- K01971  ligD  [tr:A0A126R958_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azc:AZC_1006(900)91237.51677(1373)8-- K01971  ligD  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eah:FA04_22855(823)86236.31677(119)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...