GFIT result for T00287

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

chy:CHY_0025
(293 a.a.)
 
--
 
K01971  ligD  [tr:Q3AG37_CARHZ] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> mta:Moth_2082(306)28651.41023(67)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)28650.7980
0-- K01971  ligD  [tr:F6CIP8_DESK7] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tjr:TherJR_1553(301)28749.5960
0-> K01971  ligD  [tr:D5XFI5_THEPJ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)28548.8952
0-> K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1861(304)28848.3917
0-- K01971  ligD  [tr:F6DU47_DESRL] DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dau:Daud_0598(314)28746.3898
0-- K01971  ligD  [tr:B1I253_DESAP] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pth:PTH_1244(323)28646.2881
0-> K01971  ligD  [tr:A5D2W2_PELTS] DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_1986(303)28845.1863
0-- K01971  ligD  [tr:A4J601_DESRM] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1522(302)28744.3855
0-- K01971  ligD  [tr:F6B6K3_DESCC] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0250(297)27246.0844
0-> K01971  ligD  [tr:D9S0A8_THEOJ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1510(300)28342.8811
0-> K01971  ligD  [tr:D7CNI8_SYNLT] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hor:Hore_03410(313)28439.1772
0-> K01971  ligD  [tr:B8D1M5_HALOH] DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_01168(622)28839.6766(77)2-- K01971  ligD  [tr:C6X5D0_FLAB3] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1124(303)28739.4756
0-> K01971  ligD  [tr:Q0AXX0_SYNWW] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dmt:DESME_11390(293)28440.5754
0-> K01971  ligD  [tr:W0EEN1_9FIRM] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)28640.6750
1-- K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)28540.0748
4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sth:STH1795(307)28739.7737
1-- K01971  ligD  [tr:Q67NG3_SYMTH] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_3085(299)28639.2722(50)1-- K01971  ligD  [tr:C6W6G0_DYAFD] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)26741.9721(188)15-- K01971  ligD  [tr:W0RSS2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)27040.4717
1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)28636.0716(34)3-- K01971  ligD  [tr:C7PLF2_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)27040.4716
1-- K01971  ligD  [tr:B9LYX5_GEODF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)27041.5714
0-- K01971  ligD  [tr:F8KYR4_PARAV] DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salu:DC74_7354(337)28638.5707(198)5--     [tr:A0A059WIZ0_STRA9] hypothetical protein
> svt:SVTN_31290(342)28737.3706(92)5--     [tr:A0A0B5IIG3_9ACTO] ATP-dependent DNA ligase
> tmr:Tmar_1127(316)28538.6706
4-> K01971  ligD  [tr:E6SKN2_THEM7] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sdv:BN159_1715(338)28736.6704(186)3->     [tr:K4R0C7_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> sur:STAUR_6997(836)27241.2703(585)8-- K01971  ligD  [tr:Q09E36_STIAD] ligD; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scn:Solca_1673(810)28538.9702
1-- K01971  ligD  [tr:H8KQK1_SOLCM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_6395(343)28636.4701(181)4--     [tr:F2REZ6_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1)
> cmr:Cycma_1183(808)26440.9699
1-- K01971  ligD  [tr:G0IY51_CYCMS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fsi:Flexsi_0431(291)28238.3698
0-- K01971  ligD  [tr:F8E8Z5_FLESM] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)27239.3698
0-- K01971  ligD  [tr:W0EYS4_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)28139.5698
1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stre:GZL_01248(337)28638.5698(195)4--     [tr:A0A0A8ECA4_9ACTO] ATP-dependent DNA ligase
> sus:Acid_7844(630)27038.1693(5)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)28536.8690
1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033620(298)29037.6688
0-> K01971  ligD  [tr:A0A075R759_BRELA] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbal:M667_13175(808)29135.4688
1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rha:RHA1_ro05237(323)28637.1686(82)4--     [tr:Q0S618_RHOJR] DNA ligase (ATP), C-terminal
> afw:Anae109_0939(847)26639.1685(35)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salb:XNR_0333(339)28637.1685(135)4->     [tr:D6AZX1_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> sct:SCAT_5514(335)28836.1684(242)8->     [tr:F8JRK1_STREN] hypothetical protein
> scy:SCATT_55170(335)28836.1684(242)8->     [tr:F8JRK1_STREN] hypothetical protein
> roa:Pd630_LPD01759(323)28636.7683(76)3--     [tr:W8H7D8_RHOOP] putative ATP-dependent DNA ligase ykoU
> sci:B446_30625(347)28736.6681(180)4->     [tr:S5VCP0_STRCU] hypothetical protein
> sld:T261_0462(331)28637.4681(78)6--    hypothetical protein
> rop:ROP_52850(323)28636.7680(79)4--     [tr:C1AV42_RHOOB] hypothetical protein
> gfo:GFO_0300(802)28436.3679
0-- K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sti:Sthe_0314(301)27234.9677
1-- K01971  ligD  [tr:D1C6Z2_SPHTD] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0962(313)27740.1675(114)5-- K01971  ligD  [tr:Q2IPK4_ANADE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6709(341)28736.9675(170)2--     [tr:Q9XAM1_STRCO] SC4C6.19; hypothetical protein
> slv:SLIV_04965(341)28736.9675(149)2--     [tr:D6EFA3_STRLI] hypothetical protein
> gbm:Gbem_0128(871)28540.0674(559)2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asl:Aeqsu_3115(807)27438.3673(567)1-- K01971  ligD  [tr:I3YZY2_AEQSU] ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_28045(336)28736.9673(153)2--     [tr:A0A089Z6Y7_STRGA] hypothetical protein
> src:M271_07565(334)28835.8671(135)10->    ATP-dependent DNA ligase
> gem:GM21_0109(872)28539.6670(539)1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llo:LLO_1004(293)28734.8670
0-- K01971  ligD  [tr:D3HR29_LEGLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_1023(313)27740.1668(73)5-- K01971  ligD  [tr:B4UFZ0_ANASK] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_1020(313)27639.9667(88)3-- K01971  ligD  [tr:B8JF14_ANAD2] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)28637.4666
2-- K01971  ligD  [tr:Q6MA42_PARUW] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_7372(335)28735.9666(129)4->    hypothetical protein
> shy:SHJG_7611(335)28735.9666(129)4->     [tr:H2JQM4_STRHJ] hypothetical protein
> ase:ACPL_7020(319)28635.7665(80)3--     [tr:G8SFA9_ACTS5] DNA ligase (ATP) (EC:6.5.1.1)
> sma:SAV_1696(338)28736.2665(153)1->     [tr:Q82MG4_STRAW] hypothetical protein
> geb:GM18_0111(892)27240.4664
2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fgi:OP10G_3151(680)27038.5663(175)2-- K01971  ligD  [tr:A0A068NXY8_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aoi:AORI_4365(306)28636.0661(51)7--     [tr:R4SWR1_AMYOR] lig; DNA ligase (ATP)
> scw:TU94_28790(341)28735.2659(108)4--     [tr:A0A0C5G4B6_9ACTO] ATP-dependent DNA ligase
> sht:KO02_10895(829)28534.4659
1-- K01971  ligD  [tr:A0A088EYC0_9SPHI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcv:Bcav_0664(334)28636.7658(81)4--     [tr:C5BY32_BEUC1] DNA polymerase LigD, polymerase domain-containing protein
> ace:Acel_1378(339)28636.7657(27)2--     [tr:A0LUP0_ACIC1] hypothetical protein
> ssx:SACTE_5877(337)29435.7657(128)2->     [tr:G2NGC1_STREK] DNA polymerase LigD, polymerase domain-containing protein
> cbc:CbuK_0042(815)28238.3656
0-- K01971  ligD  [tr:B6J952_COXB1] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbg:CbuG_0044(815)28238.3656
0-- K01971  ligD  [tr:B6J2C9_COXB2] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbu:CBU_1934(815)28238.3656
0-- K01971  ligD  [tr:Q83AG5_COXBU] DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> opr:Ocepr_0487(299)28037.9655
1-- K01971  ligD  [tr:E4U673_OCEP5] DNA polymerase ligd, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sbh:SBI_08909(334)28835.4654(160)1->     [tr:D7BZY7_STRBB] hypothetical protein
> sgr:SGR_1023(345)28735.2654(146)1--     [tr:B1VU08_STRGG] hypothetical protein
> svl:Strvi_3580(334)28835.1654(101)9--     [tr:G2PEB7_STRVO] DNA polymerase LigD, polymerase domain-containing protein
> amd:AMED_4189(525)27837.4653(13)10-- K01971  ligD  [tr:D8HR62_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_4139(525)27837.4653(13)10-- K01971  ligD  [tr:G0FQB4_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_21335(525)27837.4653(13)10-- K01971  ligD  [tr:G0FQB4_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_4139(525)27837.4653(13)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psn:Pedsa_1057(822)28736.2653
1-- K01971  ligD  [tr:F0SBI2_PEDSD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> alu:BB31_07720(316)28635.3652(64)6--     [tr:A0A093B8E4_9PSEU] ATP-dependent DNA ligase
> sesp:BN6_43600(362)28635.7652(22)6--     [tr:K0K258_SACES] hypothetical protein
> aja:AJAP_17045(312)28635.7651(50)5--     [tr:A0A075UQ29_9PSEU] Hypothetical protein
> ams:AMIS_67600(313)28634.6650(33)3--     [tr:I0HG43_ACTM4] hypothetical protein
> sfi:SFUL_6474(345)28835.1650(119)3->     [tr:N0CZ27_9ACTO] eukaryotic-type DNA primase (EC:6.5.1.1)
> rhb:NY08_4613(317)28637.1649(55)2--    ATP-dependent DNA ligase
> ccx:COCOR_00956(852)27738.3648
7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> cfi:Celf_0509(356)30335.6648(103)4--     [tr:F4H892_CELFA] DNA polymerase LigD, polymerase domain-containing protein
> cga:Celgi_0324(365)30335.0646(195)3--     [tr:F8A4N0_CELGA] DNA polymerase LigD, polymerase domain protein
> pft:JBW_01941(309)28536.5646
0-- K01971  ligD  [tr:I9NVF3_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbs:COXBURSA331_A2135(815)28237.9645
0-- K01971  ligD  [tr:A9NBB8_COXBR] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nth:Nther_0139(306)27736.1645
0-> K01971  ligD  [tr:B2A484_NATTJ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfa:Sfla_0696(336)29435.0645(145)4--     [tr:E8WAH3_STRFA] DNA polymerase LigD, polymerase domain-containing protein
... ... ...