GFIT result for T00287

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

chy:CHY_0025
(293 a.a.)
 
--
 
K01971  ligD  conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> mta:Moth_2082(306)28651.41023(67)1-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)28650.7980
0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tjr:TherJR_1553(301)28749.5960
0-> K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)28548.8952
0-> K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1861(304)28848.3917
0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfg:B0537_09850(302)28746.7900
0-- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dau:Daud_0598(314)28746.3898
0-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pth:PTH_1244(323)28646.2881
0-> K01971  ligD predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_1986(303)28845.1863
0-- K01971  ligD DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1522(302)28744.3855
0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0250(297)27246.0844
0-> K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1510(300)28342.8811
0-> K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_01115(881)29141.9779(99)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cio:CEQ15_15855(625)28841.7776
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hor:Hore_03410(313)28439.1772
0-> K01971  ligD DNA polymerase LigD polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chry:CEY12_12005(623)29540.7768
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpip:CJF12_16755(628)28840.3768
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_01168(622)28839.6766(77)2-- K01971  ligD ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_05350(623)28841.0763(116)3-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1124(303)28739.4756
0-> K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_13465(629)28840.3755(81)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dmt:DESME_11390(293)28440.5754
0-> K01971  ligD DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)28640.6750
1-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)28540.0748
4-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjg:BB050_02761(853)28640.6738(637)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sth:STH1795(307)28739.7737
1-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_3085(299)28639.2722(50)1-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)26741.9721(188)15-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_02362(289)27738.6718(119)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)27040.4717
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbgw:UT28_C0001G0604(308)28740.1716
0-> K01971  ligD ATP-dependent DNA ligase, DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)28636.0716(34)3-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)27040.4716
1-- K01971  ligD ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tab:CIG75_09945(309)29137.8716
0-> K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)27041.5714
0-- K01971  ligD putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mbd:MEBOL_004870(838)27239.0710
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)27140.6708
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)28139.9707
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sall:SAZ_38070(331)28638.5707(198)5--    ATP-dependent DNA ligase
> salu:DC74_7354(337)28638.5707(198)5--    hypothetical protein
> svt:SVTN_31290(342)28737.3706(92)5--    ATP-dependent DNA ligase
> tmr:Tmar_1127(316)28538.6706
4-> K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sdv:BN159_1715(338)28736.6704(186)3->    DNA polymerase LigD, polymerase domain-containing protein
> sur:STAUR_6997(836)27241.2703(585)8-- K01971  ligD ligD; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)29337.5702
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scn:Solca_1673(810)28538.9702
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_6395(343)28636.4701(181)4--    ATP-dependent DNA ligase
> cmr:Cycma_1183(808)26440.9699
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snr:SNOUR_05270(331)28638.5699(193)0--    DNA ligase D, polymerase domain
> fsi:Flexsi_0431(291)28238.3698
0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)27239.3698
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)28139.5698
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psty:BFS30_22300(919)26940.1698(49)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sclf:BB341_03015(338)28635.7698(213)0->    ATP-dependent DNA ligase
> stre:GZL_01248(337)28638.5698(195)4--    ATP-dependent DNA ligase
> pnl:PNK_2195(623)28641.3696
0-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)27039.6695
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slau:SLA_6344(331)28637.1695(210)0--    ATP-dependent DNA ligase
> rhu:A3Q40_00154(316)28636.4694(119)0--    hypothetical protein
> sus:Acid_7844(630)27038.1693(5)5-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_30230(337)28637.1692(175)0--    ATP-dependent DNA ligase
> zpr:ZPR_3654(811)28536.8690
1-- K01971  ligD ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgv:B1H19_37050(336)28637.8689(116)0--    ATP-dependent DNA ligase
> blr:BRLA_c033620(298)29037.6688
0-> K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbal:M667_13175(808)29135.4688
1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfus:CYFUS_001959(865)27139.1686
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lfb:C1X05_08340(296)28737.3686
0-> K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rha:RHA1_ro05237(323)28637.1686(82)4--    possible DNA ligase (ATP), C-terminal
> afw:Anae109_0939(847)26639.1685(35)78-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2516(323)29436.7685
0-> K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salb:XNR_0333(339)28637.1685(135)4->    DNA polymerase LigD, polymerase domain-containing protein
> sct:SCAT_5514(335)28836.1684(242)8->    conserved protein of unknown function
> scy:SCATT_55170(335)28836.1684(242)8->    hypothetical protein
> lsh:CAB17_09265(293)28733.8683
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> roa:Pd630_LPD01759(323)28636.7683(76)3--    putative ATP-dependent DNA ligase ykoU
> spun:BFF78_06685(335)28736.9683(195)0--    ATP-dependent DNA ligase
> fln:FLA_6428(914)26938.7682
0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slc:SL103_20370(337)28637.8682(154)0--    ATP-dependent DNA ligase
> sci:B446_30625(347)28736.6681(180)4->    hypothetical protein
> sld:T261_0462(331)28637.4681(78)6--    hypothetical protein
> marm:YQ22_16380(805)29134.7680
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rop:ROP_52850(323)28636.7680(79)4--    hypothetical protein
> strc:AA958_31990(336)28637.1680(104)1--    ATP-dependent DNA ligase
> gfo:GFO_0300(802)28436.3679
0-- K01971  ligD ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_1067(337)28835.8679(122)0->    DNA polymerase LigD polymerase subunit
> pgs:CPT03_07335(844)28037.5678
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> camu:CA2015_1090(810)28538.2677
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plh:VT85_02045(484)26741.6677
0-- K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slx:SLAV_07660(339)28636.0677(191)0->    ykoU1; putative ATP-dependent DNA ligase YkoU
> sti:Sthe_0314(301)27234.9677
1-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0962(313)27740.1675(114)5-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grl:LPB144_07705(802)27436.9675
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6709(341)28736.9675(170)2--    SC4C6.19; hypothetical protein
> slv:SLIV_04965(341)28736.9675(149)2--    hypothetical protein
> age:AA314_02665(854)27237.9674(52)5-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)28540.0674(559)2-- K01971  ligD ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rti:DC20_13500(303)26839.2674
0-- K01971  ligD DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asl:Aeqsu_3115(807)27438.3673(567)1-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_28045(336)28736.9673(153)2--    hypothetical protein
> strm:M444_27905(332)28636.4673(195)3->    ATP-dependent DNA ligase
... ... ...