GFIT result for T01221

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

cse:Cseg_3113
(883 a.a.)
 
--
 
K01971  ligD  [tr:D5VM30_CAUST] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> cak:Caul_1769(918)92363.43826(3563)4-- K01971  ligD  [tr:B0T3L2_CAUSK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpe:RPE_3724(907)90961.83723(3486)4-- K01971  ligD  [tr:Q07K81_RHOP5] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpc:RPC_3685(920)90662.73722(3461)7-- K01971  ligD  [tr:Q210G6_RHOPB] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:bll6773(892)90061.43695(2979)11-- K01971  ligD  [tr:Q89FC8_BRADU] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brad:BF49_4877(903)89661.93695(2579)0-- K01971  ligD  [tr:A0A160UCT5_BRASZ] ATPdependent DNA ligase EC 6511 clustered with Ku protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bic:LMTR13_06580(890)89561.03693(3055)0-- K01971  ligD  [tr:A0A1B1URC7_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpa:RPA3650(914)91862.03687(3418)9-- K01971  ligD  [tr:Q6N3P3_RHOPA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpx:Rpdx1_1701(914)91862.03687(3395)14-- K01971  ligD  [tr:E6VKS9_RHOPX] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)89361.13673(2135)4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)89460.93669(2934)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)89260.43665(2910)6-- K01971  ligD  [tr:U4QIX7_9RHIZ] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5638(882)88761.33662(44)6-- K01971  ligD  [tr:C6B958_RHILS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvv:BHK69_13460(879)88760.43659(2931)0-- K01971  ligD  [tr:A0A1D7U1T7_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_04490(883)89260.43657(1269)0-- K01971  ligD  [tr:A0A109VSJ1_RHIRD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brs:S23_15390(889)89761.53657(3348)3-- K01971  ligD  [tr:I0G1W9_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)89260.23654(2893)8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpd:RPD_3490(930)92860.23653(2979)11-- K01971  ligD  [tr:Q133M6_RHOPS] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpt:Rpal_4171(914)91961.83652(2978)14-- K01971  ligD  [tr:B3QGJ0_RHOPT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu5055(884)89260.03647(1399)6-- K01971  ligD  [tr:Q7D410_AGRFC] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_12895(888)89561.53645(2955)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_26450(888)89561.53645(2955)10-- K01971  ligD  [tr:G7DBZ5_BRAJP] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bop:AXW83_24315(891)88960.43645(1405)0-- K01971  ligD  [tr:A0A126P1J3_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bro:BRAD285_1482(907)90760.53645(2865)0-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)89460.43642(2900)7-- K01971  ligD  [tr:B6A397_RHILW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpb:RPB_1876(914)91761.33638(3396)12-- K01971  ligD  [tr:Q2IYX6_RHOP2] ATP dependent DNA ligase, central; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_09220(895)90261.63637(2519)0-- K01971  ligD  [tr:A0A0X8CFL2_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bra:BRADO5823(904)90460.53634(3333)3-- K01971  ligD  [tr:A4Z011_BRASO] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aol:S58_17960(909)90959.73622(3300)4-- K01971  ligD  [tr:M4Z390_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll9625(883)89260.53619(1345)13-- K01971  ligD  [tr:Q98P39_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_14508(887)88860.83616(1251)4-- K01971  ligD  [tr:F0LFT4_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)89260.03610(1928)6-- K01971  ligD  [tr:Q2K0P3_RHIEC] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)89160.43609(2837)6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)89260.03609(1923)8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_6329(895)90260.53607(2997)6-- K01971  ligD  [tr:A5EQ03_BRASB] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhn:AMJ98_PD00262(882)89259.93604(1923)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhx:AMK02_PE00262(882)89259.93604(1931)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)89259.53603(2922)5-- K01971  ligD  [tr:Q1M4N0_RHIL3] putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)89060.33602(2829)5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_31130(878)89259.63593(1192)0-- K01971  ligD  [tr:A0A1A9GDH8_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pzu:PHZ_c3259(887)90660.43592(2410)18-- K01971  ligD  [tr:B4RAS0_PHEZH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)89259.53591(2887)10-- K01971  ligD  [tr:W8I8X7_ENSAD] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eah:FA04_28305(880)89159.33588(1665)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000197(882)89259.93587(1262)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msl:Msil_1736(888)90059.63580(2903)4-- K01971  ligD  [tr:B8EKE2_METSB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)89759.03580(3302)5-- K01971  ligD  [tr:A7INJ2_XANP2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oca:OCAR_6912(889)90459.83579(3347)1-- K01971  ligD  [tr:B6JFK1_OLICO] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ocg:OCA5_c11710(889)90459.83579(3347)1-- K01971  ligD  [tr:B6JFK1_OLICO] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oco:OCA4_c11710(889)90459.83579(3347)1-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> same:SAMCFNEI73_pB0496(946)88759.83578(1197)0-- K01971  ligD  [tr:A0A1L3LUE4_9RHIZ] ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpha:AMC79_PB00200(881)89259.53574(1246)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)89359.03573(2770)7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sino:SS05631_b52860(878)89059.33569(1201)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_03940(878)89059.13569(1235)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)89059.13567(1238)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ops:A8A54_22075(882)89359.43560(3271)0-- K01971  ligD  [tr:A0A1A9FVN3_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19515(878)89058.93554(1220)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> six:BSY16_4675(879)89458.73550(2868)0-- K01971  ligD  [tr:A0A1B3MJD8_9RHIZ] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)89058.93550(1216)15-- K01971  ligD  [tr:F7XBX2_SINMM] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_pLPU83d1032(879)89159.33540(1249)13-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nha:Nham_3907(900)90558.33516(104)9-- K01971  ligD  [tr:Q1QGQ0_NITHX] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nwi:Nwi_0353(913)91659.03516(3256)3-- K01971  ligD  [tr:Q3SVS1_NITWN] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bne:DA69_02155(844)88551.12970(1515)0-- K01971  ligD  [tr:A0A172Y3D5_9CAUL] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brl:BZG35_02475(864)89451.92946(2624)0-- K01971  ligD  [tr:A0A1S6ERG9_9CAUL] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsb:Bresu_0521(859)89552.12925(2607)7-- K01971  ligD  [tr:D9QKL0_BRESC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brd:JL11_05515(851)89150.82918(2607)0-- K01971  ligD  [tr:A0A0P0CNQ1_9CAUL] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brg:A4249_10585(853)88851.12917(2588)0-- K01971  ligD  [tr:A0A160HYG7_9CAUL] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvc:CEP68_04590(853)88950.52895(2570)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nao:Y958_30480(852)88746.32403(891)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pye:A6J80_22380(845)87245.82400(2124)0-- K01971  ligD  [tr:A0A1V0GYX4_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> meso:BSQ44_02815(861)89044.92388(2073)0-- K01971  ligD  [tr:A0A1L3SLZ4_9RHIZ] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)88245.02376(2272)7-- K01971  ligD  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)94143.92376(2094)10-- K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azc:AZC_1006(900)90644.72369(2115)8-- K01971  ligD  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_b04710(850)89044.72357(49)7-- K01971  ligD  [tr:Q6W1H3_SINFN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)88944.82354(2070)6-- K01971  ligD  [tr:D7A5M0_STAND] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c16580(850)87644.62349(53)8-- K01971  ligD  [tr:I3X2Z1_RHIFR] ykoU2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)88444.62348(1640)3-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI0169(856)88244.62347(2243)4-- K01971  ligD  [tr:A9H268_GLUDA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)88345.02339(400)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)88045.02334(329)9-- K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)88045.02334(329)9-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)88045.02334(409)7-- K01971  ligD  [tr:A0A0E0UFQ3_SINMB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)88045.02333(407)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aak:AA2016_6337(865)89444.52331(430)0-- K01971  ligD  [tr:A0A142MFW3_AMIAI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphj:BSL82_05400(829)88144.62324(2023)0-- K01971  ligD  [tr:A0A1L3ZT89_9SPHN] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rht:NT26_2902(846)89343.72323(1617)0-- K01971  ligD  [tr:L0NII4_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)89443.62315(2085)1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> esj:SJ05684_c27600(864)89844.02314(410)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agc:BSY240_2160(862)88044.02307(2049)0-- K01971  ligD  [tr:A0A1B3NZS8_9RHIZ] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)88544.02304(433)6-- K01971  ligD  [tr:E8TFS2_MESCW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)87044.92303(382)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphm:G432_04400(849)87445.42297(2030)6-- K01971  ligD  [tr:M4SD88_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mesw:A9K65_004035(837)88743.62294(437)0-- K01971  ligD  [tr:A0A1W6X1F3_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mln:A9174_03965(829)87044.62286(413)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mamo:A6B35_04445(841)88643.92283(366)0-- K01971  ligD  [tr:G6Y5E4_9RHIZ] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)89243.32279
0-- K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ghi:107941224(850)89043.92269(2019)0--     [tr:A0A1U8MTV7_GOSHI] multifunctional non-homologous end joining protein LigD-like
> mes:Meso_1150(845)88943.62268(1543)3-- K01971  ligD  [tr:Q11J79_CHESB] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)88543.62260(387)4-- K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)89043.52257(367)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...