GFIT result for T02278

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ded:DHBDCA_p2113
(305 a.a.)
 
--
 
K01971  ligD  ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> dec:DCF50_p2127(305)305100.02065
0<> K01971  ligD  [tr:K4L3M4_9FIRM] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drs:DEHRE_05390(294)29793.61877
0<> K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> csd:Clst_1549(290)26557.71061
0<- K01971  ligD ligD1; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ntr:B0W44_14280(299)29748.5989
0-- K01971  ligD  [tr:A0A1U9K9P7_9BACL] DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> clb:Clo1100_0394(303)30347.5970
0<- K01971  ligD  [tr:H2JI29_9CLOT] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033620(298)29549.8965
0<- K01971  ligD  [tr:A0A075R759_BRELA] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cce:Ccel_0366(304)28250.0964
0<- K01971  ligD  [tr:B8I5T4_CLOCE] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbe:BBR47_36590(300)27548.0884
0-- K01971  ligD  [tr:C0ZFS7_BREBN] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bfm:BP422_13605(300)27348.0882
0-- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbj:VN24_04100(301)27247.8874
0<- K01971  ligD  [tr:A0A0D5NG40_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pow:IJ21_43260(298)28445.1837
0<- K01971  ligD  [tr:A0A0U2UTX0_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plv:ERIC2_c03270(301)27947.7834
0<- K01971  ligD  [tr:V9W2K7_9BACL] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pjd:Pjdr2_4985(304)29944.5822
0<- K01971  ligD  [tr:C6D0J7_PAESJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tco:Theco_3020(299)27547.3818
2<- K01971  ligD  [tr:L0EHB3_THECK] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmet:BMMGA3_09875(609)29045.2814
0-- K01971  ligD  [tr:I3E9F3_BACMT] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1510(300)29041.0802
0<- K01971  ligD  [tr:D7CNI8_SYNLT] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paef:R50345_04765(294)26948.0801
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdu:PDUR_06230(294)27645.3795
0<- K01971  ligD  [tr:A0A089HI07_PAEDU] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paej:H70737_05035(294)26947.2793
0-- K01971  ligD  [tr:A0A089IIA5_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pih:UB51_17835(294)27646.4792
0-- K01971  ligD  [tr:A0A0D3VE87_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pswu:SY83_12925(296)26844.8792
0<- K01971  ligD  [tr:A0A172TJ02_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmq:PM3016_6911(306)27146.5785(393)2<- K01971  ligD  [tr:H6NQP0_9BACL] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pms:KNP414_07351(306)27146.5785(43)1<- K01971  ligD  [tr:F8FPP1_PAEMK] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmw:B2K_34865(306)27146.5785(45)1<- K01971  ligD  [tr:I0BTY1_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pgm:PGRAT_05830(294)27446.0782
0<- K01971  ligD  [tr:A0A089NDZ2_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnp:IJ22_50340(302)27745.5782
0<- K01971  ligD  [tr:A0A0U2M9R5_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tab:CIG75_09945(309)28840.6780
0<- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pste:PSTEL_06010(293)27645.7777
0<- K01971  ligD  [tr:A0A089LU17_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbd:PBOR_05790(295)27046.3775
0<- K01971  ligD  [tr:A0A089LBI8_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdh:B9T62_38390(294)27644.9775
0<- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pod:PODO_04905(294)27246.0775
0-- K01971  ligD  [tr:A0A1R0WTA3_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pri:PRIO_1233(294)27446.0775
0-- K01971  ligD  [tr:A0A0E4H8L6_9BACL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bck:BCO26_1265(613)27642.4772
0-- K01971  ligD  [tr:F7Z7D1_BACC6] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pyg:AWM70_01385(296)27344.3772
0<- K01971  ligD  [tr:A0A1B1MW40_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0250(297)28940.5772
0<- K01971  ligD  [tr:D9S0A8_THEOJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paea:R70723_04810(294)27944.8767
0<- K01971  ligD  [tr:A0A089KAB2_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pib:BBD41_19405(305)27543.6767
0<- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psab:PSAB_04965(294)27644.2767
0<- K01971  ligD  [tr:X4ZW24_9BACL] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baci:B1NLA3E_13055(622)28741.8766
0-- K01971  ligD  [tr:N0AT41_9BACI] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bag:Bcoa_3265(613)27642.0766
0-- K01971  ligD  [tr:G2TMD9_BACCO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bon:A361_18415(612)28843.4766
0-- K01971  ligD  [tr:A0A160MEP7_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)28442.3766
0-- K01971  ligD  [tr:F6CIP8_DESK7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baco:OXB_3302(607)29540.0765
0-- K01971  ligD  [tr:A0A0A8JMU5_BACSX] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeq:R50912_05375(294)27744.8765
0<- K01971  ligD  [tr:A0A089JVK0_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeh:H70357_05705(294)26747.2764
0<- K01971  ligD  [tr:A0A089HVZ3_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcoa:BF29_289(613)27642.0763
0-- K01971  ligD  [tr:A0A0B5X848_BACCO] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paen:P40081_06065(294)26945.7762
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_2082(306)28239.7758(46)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gym:GYMC10_5317(305)27541.8757
0<- K01971  ligD  [tr:D3EG05_GEOS4] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paee:R70331_04850(294)28243.6756
0<- K01971  ligD  [tr:A0A089KP77_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tjr:TherJR_1553(301)28639.5756
0<- K01971  ligD  [tr:D5XFI5_THEPJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxi:BK049_18310(621)27544.0752(646)0-- K01971  ligD  [tr:K2NY87_9BACI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gst:HW35_02605(609)28941.2752
0-- K01971  ligD  [tr:A0A077J3M5_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pxl:BS614_10435(296)27144.3751
0<- K01971  ligD  [tr:A0A1L5LLX1_9BACL] DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpu:BPUM_1666(621)29642.9750
0-- K01971  ligD  [tr:A8FDM8_BACP2] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)28839.6748
0<- K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpf:BpOF4_18445(578)26843.3746
0-- K01971  ligD  [tr:D3FS95_BACPE] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bif:N288_15905(612)29639.5743
0-- K01971  ligD  [tr:U5LC79_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> apak:AP3564_11545(599)26643.2742
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bco:Bcell_3194(413)27642.0741
0<- K01971  ligD  [tr:E6U0J1_BACCJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacw:QR42_08520(610)26744.9739
0-- K01971  ligD  [tr:A0A0B4S8F3_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bhk:B4U37_07665(616)28241.5739
0-- K01971  ligD  [tr:A0A1Y0CLG3_9BACI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vir:X953_17615(598)30039.3738
1-- K01971  ligD  [tr:A0A075JXD0_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pta:HPL003_14050(300)27342.9736
0-- K01971  ligD  [tr:G7W0E0_PAETH] eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lao:AOX59_15425(602)26542.6734
0-- K01971  ligD  [tr:A0A0U4FH55_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpus:UP12_08580(621)29641.9733
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppq:PPSQR21_012210(300)27143.9733
0-- K01971  ligD DNA polymerase ligd, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmr:Cycma_1183(808)28740.8731
1-- K01971  ligD  [tr:G0IY51_CYCMS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1522(302)29740.4731
0-- K01971  ligD  [tr:F6B6K3_DESCC] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_2087(804)28639.2731(139)0-- K01971  ligD  [tr:A0A1L7I5D3_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_05350(623)29840.6729(77)3-- K01971  ligD  [tr:A0A0G3LZV4_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppm:PPSC2_05990(300)27143.5729
0-- K01971  ligD  [tr:E3EIA8_PAEPS] ykoU; DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppo:PPM_1132(300)27143.5729
0-- K01971  ligD ykoU; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppoy:RE92_05895(300)27143.5729
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpum:BW16_09190(621)29642.2727
0-- K01971  ligD  [tr:W8QWG2_BACPU] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpip:CJF12_16755(628)29839.9725
0-- K01971  ligD  [tr:A0A086BLV6_9FLAO] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ble:BleG1_3934(601)28341.0722
0-- K01971  ligD  [tr:A0A060LZ04_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfo:GFO_0300(802)29237.7722
0-- K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppeo:ABE82_06100(300)27143.2722
0-- K01971  ligD  [tr:A0A0K2F5F5_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppol:X809_06005(300)27143.2722
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppy:PPE_01161(300)27143.2722
0-- K01971  ligD  [tr:E0RM81_PAEP6] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_13465(629)29139.2717(42)0-- K01971  ligD  [tr:A0A0S3FXQ3_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cio:CEQ15_15855(625)29838.6717
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vhl:BME96_17105(598)30039.0717
0-- K01971  ligD  [tr:A0A1J0H5R2_VIRHA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> camu:CA2015_1090(810)28639.2716
1-- K01971  ligD  [tr:A0A0H4PQK2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lfu:HR49_10880(605)29339.2716
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1124(303)28838.5714
0<- K01971  ligD  [tr:Q0AXX0_SYNWW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bha:BH2209(611)28038.9713
0-- K01971  ligD  [tr:Q9KAS8_BACHD] BH2209; unknown conserved protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_15345(891)27837.4713(114)0-- K01971  ligD  [tr:A0A0P0UCE5_FLAPS] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grl:LPB144_07705(802)29837.2713
0-- K01971  ligD  [tr:A0A1L3J570_9FLAO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbgw:UT28_C0001G0604(308)29440.5710
0<- K01971  ligD  [tr:A0A0G4B481_9BACT] ATP-dependent DNA ligase, DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lsp:Bsph_3075(605)29338.9705
1-- K01971  ligD  [tr:B1HPE2_LYSSC] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> siv:SSIL_2188(613)26841.0705
0-- K01971  ligD  [tr:F2F5S8_SOLSS] predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_1986(303)28640.6703
0-- K01971  ligD  [tr:A4J601_DESRM] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salt:AO058_01020(819)30037.0703
0-- K01971  ligD  [tr:A0A1L6QZ30_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hmn:HM131_02765(590)29238.4701
0-- K01971  ligD  [tr:A0A1W5ZR97_9BACI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssil:SOLI23_07720(611)28439.4699
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vil:CFK37_12580(607)27239.0699
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)28537.9698
4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sob:CSE16_07755(609)28237.9698
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...