GFIT result for T03938

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

dew:DGWBC_0734
(337 a.a.)
 
--
 
K01971  ligD  [tr:A0A0F7GDW9_9CHLR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> dfo:Dform_00676(320)31161.41333
0-> K01971  ligD  [tr:A0A1P8F6C5_9CHLR] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aza:AZKH_2968(851)32244.1835(708)0-> K01971  ligD  [tr:H0PVB9_9RHOO] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)32042.5824
2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gem:GM21_0109(872)32042.8814
1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)31643.0810
1-> K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)32343.3806
2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> beba:BWI17_11510(914)32140.2781
0-- K01971  ligD  [tr:A0A1P8FJH2_9PROT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpy:BA022_07305(837)31941.4781(569)0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psd:DSC_15030(830)31842.8780
7-> K01971  ligD  [tr:G7UVI9_PSEUP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ajs:Ajs_2523(837)31941.4778(562)10-> K01971  ligD  [tr:A1W8V8_ACISJ] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psj:PSJM300_09695(840)33142.0776(608)1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)31740.7773(90)5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)34039.7773
0-> K01971  ligD  [tr:F8KYR4_PARAV] putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gur:Gura_3452(534)31043.5771
0-- K01971  ligD  [tr:A5G740_GEOUR] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)33038.5770(560)1-> K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)32241.3766(463)0-> K01971  ligD  [tr:A0A172TV90_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fgi:OP10G_1634(868)31439.5764(65)3->     [tr:A0A068NNM3_9BACT] DNA ligase D
> pnl:PNK_2195(623)31041.9763(492)0-- K01971  ligD  [tr:A0A0U5JG24_9BACT] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmos:O165_009385(864)33340.5760(551)2-- K01971  ligD  [tr:A0A088NN47_9PSED] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)32142.4755(112)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)33040.3753(419)4-- K01971  ligD  [tr:Q1ITL6_KORVE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)31041.9752
0-- K01971  ligD  [tr:W0EYS4_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjg:BB050_02761(853)31543.5751(505)0-> K01971  ligD  [tr:A0A1B2U2C3_FLAJO] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)33640.5750
0-- K01971  ligD  [tr:A0A0X8HBT1_9GAMM] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfc:PflA506_1430(853)33040.6750(37)2-- K01971  ligD ligD_2; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lab:LA76x_2742(850)33340.8749(338)0-> K01971  ligD  [tr:A0A0S2FBC9_9GAMM] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> laq:GLA29479_1890(551)33340.8749(340)0-> K01971  ligD ligD; DNA ligase D, 3'-phosphoesterase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psh:Psest_2179(854)32340.6749
2-- K01971  ligD  [tr:L0GIZ3_PSEST] ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmc:LMI_2571(822)32740.1749
0-- K01971  ligD  [tr:A0A098GIL1_TATMI] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psz:PSTAB_2018(851)33540.6747
2-- K01971  ligD  [tr:F8HAP9_PSEST] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aaa:Acav_2693(936)33741.2746(529)28-> K01971  ligD  [tr:F0Q2F4_ACIAP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_2087(804)33337.5746(455)0-> K01971  ligD  [tr:A0A1L7I5D3_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)31842.1740
0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)31941.7739(471)0-> K01971  ligD  [tr:A0A1A9I261_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)35238.6738
0-> K01971  ligD  [tr:A0A0U3LYM1_9BURK] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2126(334)31541.9738(348)1--     [tr:D1Z0H6_METPS] putative ATP-dependent DNA ligase
> psa:PST_2130(851)32440.7738
4-- K01971  ligD  [tr:A4VLE4_PSEU5] DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbro:BAU06_06860(884)32040.9735(543)0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_08150(315)31441.1735(114)0--     [tr:A0A109QA74_9BRAD] DNA ligase
> pcq:PcP3B5_27230(850)32140.8735
0-- K01971  ligD  [tr:A0A127MSE9_9PSED] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pkr:AYO71_18905(877)33939.5734(523)0-- K01971  ligD  [tr:A0A142NDM3_9PSED] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)33740.9732(520)85-> K01971  ligD  [tr:A1TQ54_ACIAC] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)31043.9732(503)1-> K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)33939.5732
1-> K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)31540.3732(456)2-- K01971  ligD  [tr:Q6MA42_PARUW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xve:BJD12_13160(705)31943.9732(193)0-> K01971  ligD  [tr:F0BKV2_9XANT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)32539.4731
1-> K01971  ligD  [tr:A9HXI5_BORPD] unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psc:A458_10100(854)32739.8731(607)1-- K01971  ligD  [tr:I4CT52_PSEST] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)35237.8730(501)1-> K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)35237.8730(501)0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vpe:Varpa_0532(869)31739.7730(173)9-- K01971  ligD  [tr:E6V5E7_VARPE] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_0365(902)33040.0729(473)2-- K01971  ligD  [tr:C6VYF5_DYAFD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfk:PFAS1_00235(863)32740.4729(512)0-- K01971  ligD  [tr:A0A1P8ENN1_9PSED] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pol:Bpro_3003(882)32339.0729(544)2-> K01971  ligD  [tr:Q128X5_POLSJ] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pstu:UIB01_11265(854)32540.3729
2-- K01971  ligD  [tr:A0A023WTK2_PSEST] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_09810(315)31441.1728(12)6--    DNA ligase
> bju:BJ6T_19970(315)31441.1728(12)8--     [tr:G7D608_BRAJP] hypothetical protein
> pfo:Pfl01_2097(848)32340.9728(519)2-- K01971  ligD  [tr:Q3KEG6_PSEPF] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psyr:N018_16280(863)31840.6727(548)4-> K01971  ligD  [tr:W0MWS7_PSESX] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> adt:APT56_19400(885)31940.4726(414)0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcp:JM49_15955(841)32139.6726
1-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)32039.7726(368)47-- K01971  ligD  [tr:S4Y1N2_SORCE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbc:CbuK_0042(815)33740.7724
0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbg:CbuG_0044(815)33740.7724
0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbs:COXBURSA331_A2135(815)33640.2724
0-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbu:CBU_1934(815)33640.2724
0-> K01971  ligD  [tr:Q83AG5_COXBU] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfo:GFO_0300(802)32339.6724(509)0-> K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14150(332)33141.4724(141)4--     [tr:X8CFR3_MYCIT] ATP-dependent DNA ligase
> mir:OCQ_30550(332)33141.4724(141)3--     [tr:A0A1X2L0J8_9MYCO] DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)33141.4724(141)3--    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)33141.4724(141)3--     [tr:I2AF57_9MYCO] DNA polymerase LigD ligase subunit
> scl:sce3523(762)31940.1724(363)82-- K01971  ligD  [tr:A9GRV1_SORC5] unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vaa:AX767_14310(838)31840.3724(478)0-- K01971  ligD  [tr:A0A126ZG35_9BURK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xga:BI317_00950(924)32542.2724(427)0-> K01971  ligD  [tr:A0A1L5XXK6_9XANT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pst:PSPTO_3464(851)31640.2723(556)3-> K01971  ligD  [tr:Q87ZG5_PSESM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhn:AMJ98_PA00076(359)31241.0723(61)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> boh:AKI39_06670(873)32940.1722
0-> K01971  ligD  [tr:A0A1B2R0Y2_9BORD] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)31937.9722(479)4-> K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psp:PSPPH_3165(866)31640.2722(552)3-> K01971  ligD  [tr:Q48H05_PSE14] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pstt:CH92_11295(852)32339.0722(611)1-- K01971  ligD  [tr:W8R7U3_PSEST] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_0625(345)31339.0722(2)11-- K01971  ligD  [tr:W6R4Q1_9RHIZ] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:blr8031(316)31340.6721(137)8--     [tr:Q89BW7_BRADU] DNA ligase
> chry:CEY12_12005(623)30441.8721
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dac:Daci_4339(871)31140.2720(502)10-> K01971  ligD  [tr:A9BWY5_DELAS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> del:DelCs14_2489(875)31139.9720(497)10-> K01971  ligD  [tr:F6B0K4_DELSC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmk:MDS_2413(842)32241.3720(517)2-> K01971  ligD  [tr:F4DU16_PSEMN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppsy:AOC04_12150(1142)34140.2720
0-- K01971  ligD  [tr:A0A0M4QRY1_9PSED] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcg:AXG94_02520(865)32639.6719(191)0-- K01971  ligD  [tr:A0A1B3C6M5_9PSED] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_13465(629)30241.1718(35)0-- K01971  ligD  [tr:A0A0S3FXQ3_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pch:EY04_14070(844)32139.3718
1-> K01971  ligD  [tr:A0A0E1EA19_9PSED] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)31941.1718(84)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfu:CFU_1974(830)31739.1717(540)1-> K01971  ligD  [tr:G0A8U2_COLFT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cio:CEQ15_15855(625)30840.6717(443)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axn:AX27061_4222(874)32141.1716(395)35-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axx:ERS451415_04244(874)32141.1716(395)0-> K01971  ligD  [tr:A0A0D6I839_ALCXX] Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grl:LPB144_07705(802)31338.7716(516)0-> K01971  ligD  [tr:A0A1L3J570_9FLAO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xcb:XC_0109(1001)31843.1716(198)30-> K01971  ligD  [tr:A0A0H2X2G3_XANC8] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xcc:XCC0105(1001)31843.1716(198)31-> K01971  ligD  [tr:Q8PE76_XANCP] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psn:Pedsa_1057(822)31039.0715(412)1-> K01971  ligD  [tr:F0SBI2_PSESL] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daf:Desaf_0308(931)32738.8714
3-> K01971  ligD  [tr:F3YU59_DESAF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...