GFIT result for T01190

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

eok:G2583_3389
(330 a.a.)
 
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K03087  SIG2  [tr:D3QPT8_ECOCB] rpoS; RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> eab:ECABU_c30160(330)330100.02100(1402)3-> K03087  SIG2 rpoS; sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ebd:ECBD_0983(330)330100.02100(1402)3-> K03087  SIG2  [tr:C6EJC6_ECOBD] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ebe:B21_02556(330)330100.02100(1402)2-> K03087  SIG2  [tr:C6EJC6_ECOBD] rpoS; RNA polymerase, sigma S (sigma 38) factor, subunit of RNA polymerase sigma 38; K03087 RNA polymerase nonessential primary-like sigma factor
> ebl:ECD_02591(330)330100.02100(1402)2-> K03087  SIG2  [tr:C6EJC6_ECOBD] rpoS; RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ebr:ECB_02591(330)330100.02100(1402)2-> K03087  SIG2  [tr:C6UC90_ECOBR] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecf:ECH74115_3992(330)330100.02100(1402)3<> K03087  SIG2  [tr:B5Z3A3_ECO5E] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eci:UTI89_C3111(342)330100.02100(1402)3-> K03087  SIG2  [tr:Q1R7V1_ECOUT] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eck:EC55989_3012(330)330100.02100(1402)3<> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecl:EcolC_0971(330)330100.02100(1402)3-> K03087  SIG2  [tr:B1IUT8_ECOLC] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecm:EcSMS35_2866(330)330100.02100(1402)3<> K03087  SIG2  [tr:B1LQ61_ECOSM] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecoa:APECO78_17295(330)330100.02100(1402)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecoh:ECRM13516_3458(330)330100.02100(1402)3<> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecoi:ECOPMV1_03001(330)330100.02100(1402)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor rpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecol:LY180_13925(330)330100.02100(1402)4<> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecoo:ECRM13514_3592(330)330100.02100(1402)3<> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecp:ECP_2722(330)330100.02100(1402)3-> K03087  SIG2  [tr:Q0TEB8_ECOL5] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecs:ECs3595(330)330100.02100(1402)3<> K03087  SIG2  [tr:Q7ABA5_ECO57] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecv:APECO1_3782(342)330100.02100(1402)3-> K03087  SIG2  [tr:A1AET5_ECOK1] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecw:EcE24377A_3042(330)330100.02100(1402)3<> K03087  SIG2  [tr:A7ZQI5_ECO24] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecx:EcHS_A2879(330)330100.02100(1402)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecy:ECSE_2993(330)330100.02100(1402)3<> K03087  SIG2  [tr:B6I6D1_ECOSE] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecz:ECS88_3010(330)330100.02100(1402)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ekf:KO11_09270(330)330100.02100(1402)4<> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eko:EKO11_1028(342)330100.02100(1402)4<> K03087  SIG2  [tr:E8Y866_ECOKO] RpoD subfamily RNA polymerase sigma-70 subunit; K03087 RNA polymerase nonessential primary-like sigma factor
> elc:i14_3034(342)330100.02100(1402)3-> K03087  SIG2 hypothetical protein; K03087 RNA polymerase nonessential primary-like sigma factor
> eld:i02_3034(342)330100.02100(1402)3-> K03087  SIG2 hypothetical protein; K03087 RNA polymerase nonessential primary-like sigma factor
> elf:LF82_1965(330)330100.02100(1407)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor rpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elh:ETEC_2932(330)330100.02100(1402)4-> K03087  SIG2  [tr:E3PHP8_ECOH1] RNA polymerase sigma factor (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> ell:WFL_14390(330)330100.02100(1402)4<> K03087  SIG2  [tr:E0J276_ECOLW] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eln:NRG857_13435(330)330100.02100(1402)3-> K03087  SIG2  [tr:E4P4L2_ECO8N] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elr:ECO55CA74_16135(330)330100.02100(1402)3<> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elu:UM146_02850(330)330100.02100(1402)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elw:ECW_m2947(330)330100.02100(1402)4<> K03087  SIG2  [tr:E0J276_ECOLW] rpoS; RNA polymerase, sigma S (sigma 38) factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ena:ECNA114_2779(330)330100.02100(1402)4-> K03087  SIG2 RpoS, RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> eoc:CE10_3166(330)330100.02100(1402)3<> K03087  SIG2 rpoS; RNA polymerase, sigma S (sigma 38) factor; K03087 RNA polymerase nonessential primary-like sigma factor
> eoh:ECO103_3283(330)330100.02100(1402)3<> K03087  SIG2  [tr:C8U9H3_ECO10] rpoS; RNA polymerase, sigma S factor; K03087 RNA polymerase nonessential primary-like sigma factor
> eoi:ECO111_3465(330)330100.02100(1402)4<> K03087  SIG2  [tr:C8UEU9_ECO1A] rpoS; RNA polymerase, sigma S factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ese:ECSF_2537(330)330100.02100(1402)3-> K03087  SIG2  [tr:D2NLQ3_ECOS5] RNA polymerase sigma factor S RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> esl:O3K_05825(330)330100.02100(1402)3<> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> esm:O3M_05870(330)330100.02100(1402)3<> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eso:O3O_19820(330)330100.02100(1402)3<> K03087  SIG2  [tr:K0BS95_ECO1E] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eum:ECUMN_3064(330)330100.02100(1402)4<> K03087  SIG2  [tr:B7N6X1_ECOLU] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eun:UMNK88_3415(330)330100.02100(1402)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sfv:SFV_2757(330)330100.02100(1402)3<> K03087  SIG2  [tr:Q0T1H2_SHIF8] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ssj:SSON53_16960(330)330100.02100(1402)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ssn:SSON_2889(330)330100.02100(1402)3-> K03087  SIG2  [tr:Q3YYC1_SHISS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> cro:ROD_30681(330)33099.72096(1402)3<> K03087  SIG2  [tr:D2TLB2_CITRI] rpoS; RNA polymerase sigma factor (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> ebw:BWG_2477(330)33099.72096(1398)3-> K03087  SIG2  [tr:C4ZZP5_ECOBW] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecd:ECDH10B_2909(330)33099.72096(1398)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eco:b2741(330)33099.72096(1398)3-> K03087  SIG2  [sp:RPOS_ECOLI] rpoS; RNA polymerase, sigma S (sigma 38) factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ecok:ECMDS42_2246(330)33099.72096(1398)2-> K03087  SIG2 rpoS; RNA polymerase, sigma S (sigma 38) factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ebf:D782_0955(330)33099.72095(1395)4<> K03087  SIG2  [tr:L0LZB7_ENTBF] RNA polymerase, sigma 38 subunit, RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sfe:SFxv_3031(342)33099.72095(1397)2<> K03087  SIG2  [tr:D2AII4_SHIF2] rpoS; RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> sfl:SF2764(342)33099.72095(1397)2<> K03087  SIG2  [sp:RPOS_SHIFL] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sfn:SFy_3933(330)33099.72095(1397)3<> K03087  SIG2  [tr:A0A077DNV2_SHIFL] RNA polymerase sigma factor rpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sfs:SFyv_4010(330)33099.72095(1397)3<> K03087  SIG2 RNA polymerase sigma factor rpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sft:NCTC1_03042(330)33099.72095(1397)3<> K03087  SIG2  [tr:A0A094R1V7_SHIFL] rpoS; RNA polymerase sigma factor,RNA polymerase sigma factor rpoS,RNA polymerase sigma factor RpoS,RNA polymerase sigma factor RpoS,Sigma-70 region 2; K03087 RNA polymerase nonessential primary-like sigma factor
> ecq:ECED1_3196(330)33099.72092(1394)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ect:ECIAI39_2929(330)33099.72092(1394)3<> K03087  SIG2  [tr:B7NT85_ECO7I] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elo:EC042_2935(330)33099.72092(1394)3<> K03087  SIG2  [tr:D3GRS3_ECO44] rpoS; RNA polymerase sigma factor (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> elp:P12B_c2844(342)33099.72092(1394)4-> K03087  SIG2  [tr:H9UVZ0_ECOLX] rpoS; RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> eoj:ECO26_3810(330)33099.72092(1394)4<> K03087  SIG2  [tr:C8TFY9_ECO26] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> edh:EcDH1_0947(330)33099.72091(1393)3-> K03087  SIG2  [sp:RPOS_ECOLI tr:C9R0E0_ECOD1] RpoD subfamily RNA polymerase sigma-70 subunit; K03087 RNA polymerase nonessential primary-like sigma factor
> elx:CDCO157_3355(330)33099.72091(1393)3<> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> etw:ECSP_3689(330)33099.72091(1393)3<> K03087  SIG2  [tr:C6US56_ECO5T] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sdy:SDY_2940(330)33099.72091(1397)3<> K03087  SIG2  [tr:Q32CI9_SHIDS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sdz:Asd1617_03946(342)33099.72091(1397)3<> K03087  SIG2 RNA polymerase sigma factor rpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> cfd:CFNIH1_00730(330)33099.42088(1394)4<> K03087  SIG2  [tr:A0A023V3V5_CITFR] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> cko:CKO_04101(330)33099.42088(1386)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sbg:SBG_2538(330)33099.42088(1388)3-> K03087  SIG2  [tr:F8VJ08_SALBC] rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> sbo:SBO_2779(331)33199.72088(1390)3-> K03087  SIG2  [tr:Q31XA3_SHIBS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sbz:A464_2942(330)33099.42088(1388)3-> K03087  SIG2  [tr:S5MTR8_SALBN] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seb:STM474_3064(330)33099.42088(1388)4-> K03087  SIG2  [tr:E8XL52_SALT4] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sec:SC2856(330)33099.42088(1388)3-> K03087  SIG2  [tr:Q57KK0_SALCH] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sed:SeD_A3233(330)33099.42088(1388)3-> K03087  SIG2  [tr:B5FTR9_SALDC] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> see:SNSL254_A3129(330)33099.42088(1388)3-> K03087  SIG2  [tr:B4T451_SALNS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seeb:SEEB0189_05535(330)33099.42088(1388)4-> K03087  SIG2  [tr:S5GM74_SALET] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seec:CFSAN002050_20935(330)33099.42088(1388)3-> K03087  SIG2  [tr:S5HYX6_SALET] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seep:I137_13920(330)33099.42088(1388)3-> K03087  SIG2  [tr:S5UE41_SALPU] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sef:UMN798_3172(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> seh:SeHA_C3113(330)33099.42088(1388)3-> K03087  SIG2  [tr:B4TFW1_SALHS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sei:SPC_2966(330)33099.42088(1388)3-> K03087  SIG2  [tr:C0PXA0_SALPC] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sej:STMUK_2913(330)33099.42088(1388)4-> K03087  SIG2  [sp:RPOS_SALTU] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sek:SSPA2592(330)33099.42088(1388)3-> K03087  SIG2  [tr:B5BEX8_SALPK] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sel:SPUL_2922(330)33099.42088(1388)3-> K03087  SIG2 rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> sem:STMDT12_C29730(330)33099.42088(1388)4-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sena:AU38_14035(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senb:BN855_29670(330)33099.42088(1388)3-> K03087  SIG2 SBOV29511; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> send:DT104_29221(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> sene:IA1_14010(330)33099.42088(1388)4-> K03087  SIG2  [tr:V5KKR4_SALTH] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senh:CFSAN002069_17650(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seni:CY43_15260(330)33099.42088(1388)4-> K03087  SIG2  [tr:S5ZIY8_SALTM] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senj:CFSAN001992_18920(330)33099.42088(1388)4-> K03087  SIG2  [tr:M4M0P4_SALET] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senl:IY59_14640(330)33099.42088(1388)3-> K03087  SIG2  [tr:H6U4I4_SALEN] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senn:SN31241_40170(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> seno:AU37_14045(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senq:AU40_15800(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sens:Q786_14090(330)33099.42088(1388)3-- K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senv:AU39_14045(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seo:STM14_3526(330)33099.42088(1388)4-> K03087  SIG2  [sp:RPOS_SALT1] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
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