GFIT result for T01190

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

eok:G2583_3389
(330 a.a.)
 
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K03087  SIG2  [tr:D3QPT8_ECOCB] rpoS; RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> eab:ECABU_c30160(330)330100.02100(1402)4-> K03087  SIG2  [tr:E1P8U3_ECOAB] rpoS; sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ebd:ECBD_0983(330)330100.02100(1402)5-> K03087  SIG2  [tr:C6EJC6_ECOBD] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ebe:B21_02556(330)330100.02100(1402)4-> K03087  SIG2  [tr:C6EJC6_ECOBD] rpoS; RNA polymerase, sigma S (sigma 38) factor, subunit of RNA polymerase sigma 38; K03087 RNA polymerase nonessential primary-like sigma factor
> ebl:ECD_02591(330)330100.02100(1402)4-> K03087  SIG2  [tr:C6EJC6_ECOBD] rpoS; RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ebr:ECB_02591(330)330100.02100(1402)4-> K03087  SIG2  [tr:C6UC90_ECOBR] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecf:ECH74115_3992(330)330100.02100(1402)6<> K03087  SIG2  [tr:B5Z3A3_ECO5E] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eci:UTI89_C3111(342)330100.02100(1402)4-> K03087  SIG2  [tr:Q1R7V1_ECOUT] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eck:EC55989_3012(330)330100.02100(1402)4<> K03087  SIG2  [tr:B7LEF8_ECO55] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecl:EcolC_0971(330)330100.02100(1402)6-> K03087  SIG2  [tr:B1IUT8_ECOLC] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecm:EcSMS35_2866(330)330100.02100(1402)6<> K03087  SIG2  [tr:B1LQ61_ECOSM] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecoa:APECO78_17295(330)330100.02100(1402)4-> K03087  SIG2  [tr:M4JUA6_ECOLX] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecoi:ECOPMV1_03001(330)330100.02100(1402)4-> K03087  SIG2  [tr:T2MV50_ECOLX] rpoS; RNA polymerase sigma factor rpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecol:LY180_13925(330)330100.02100(1402)5<> K03087  SIG2  [tr:T2G5Y3_ECOLX] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecoo:ECRM13514_3592(330)330100.02100(1402)7<> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecp:ECP_2722(330)330100.02100(1402)4-> K03087  SIG2  [tr:Q0TEB8_ECOL5] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecs:ECs3595(330)330100.02100(1402)6<> K03087  SIG2  [tr:Q7ABA5_ECO57] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecv:APECO1_3782(342)330100.02100(1402)4-> K03087  SIG2  [tr:A1AET5_ECOK1] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecw:EcE24377A_3042(330)330100.02100(1402)5<> K03087  SIG2  [tr:A7ZQI5_ECO24] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecx:EcHS_A2879(330)330100.02100(1402)4-> K03087  SIG2  [tr:A8A3M0_ECOHS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecy:ECSE_2993(330)330100.02100(1402)4<> K03087  SIG2  [tr:B6I6D1_ECOSE] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecz:ECS88_3010(330)330100.02100(1402)4-> K03087  SIG2  [tr:B7MKL5_ECO45] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ekf:KO11_09270(330)330100.02100(1402)5<> K03087  SIG2  [tr:H9YFW2_ECOKO] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eko:EKO11_1028(342)330100.02100(1402)5<> K03087  SIG2  [tr:E8Y866_ECOKO] RpoD subfamily RNA polymerase sigma-70 subunit; K03087 RNA polymerase nonessential primary-like sigma factor
> elc:i14_3034(342)330100.02100(1402)4-> K03087  SIG2  [tr:G7RSP0_ECOC1] hypothetical protein; K03087 RNA polymerase nonessential primary-like sigma factor
> eld:i02_3034(342)330100.02100(1402)4-> K03087  SIG2  [tr:G7R5T2_ECOC2] hypothetical protein; K03087 RNA polymerase nonessential primary-like sigma factor
> elf:LF82_1965(330)330100.02100(1407)4-> K03087  SIG2  [tr:Q9S6Q0_ECOLX] rpoS; RNA polymerase sigma factor rpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elh:ETEC_2932(330)330100.02100(1402)6-> K03087  SIG2  [tr:E3PHP8_ECOH1] RNA polymerase sigma factor (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> ell:WFL_14390(330)330100.02100(1402)5<> K03087  SIG2  [tr:E0J276_ECOLW] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eln:NRG857_13435(330)330100.02100(1402)4-> K03087  SIG2  [tr:E4P4L2_ECO8N] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elr:ECO55CA74_16135(330)330100.02100(1402)6<> K03087  SIG2  [tr:H6MHM7_ECOLX] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elu:UM146_02850(330)330100.02100(1402)4-> K03087  SIG2  [tr:E1S165_ECOUM] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elw:ECW_m2947(330)330100.02100(1402)5<> K03087  SIG2  [tr:E0J276_ECOLW] rpoS; RNA polymerase, sigma S (sigma 38) factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ena:ECNA114_2779(330)330100.02100(1402)5-> K03087  SIG2  [tr:G0D9P1_ECOLX] RpoS, RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> eoc:CE10_3166(330)330100.02100(1402)5<> K03087  SIG2  [tr:G4PZB1_ECOLX] rpoS; RNA polymerase, sigma S (sigma 38) factor; K03087 RNA polymerase nonessential primary-like sigma factor
> eoh:ECO103_3283(330)330100.02100(1402)4<> K03087  SIG2  [tr:C8U9H3_ECO10] rpoS; RNA polymerase, sigma S factor; K03087 RNA polymerase nonessential primary-like sigma factor
> eoi:ECO111_3465(330)330100.02100(1402)6<> K03087  SIG2  [tr:C8UEU9_ECO1A] rpoS; RNA polymerase, sigma S factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ese:ECSF_2537(330)330100.02100(1402)4-> K03087  SIG2  [tr:D2NLQ3_ECOS5] RNA polymerase sigma factor S RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> esl:O3K_05825(330)330100.02100(1402)4<> K03087  SIG2  [tr:K0AKP9_ECO1C] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> esm:O3M_05870(330)330100.02100(1402)4<> K03087  SIG2  [tr:J9ZGQ6_ECO14] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eso:O3O_19820(330)330100.02100(1402)4<> K03087  SIG2  [tr:K0BS95_ECO1E] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eum:ECUMN_3064(330)330100.02100(1402)5<> K03087  SIG2  [tr:B7N6X1_ECOLU] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eun:UMNK88_3415(330)330100.02100(1402)5-> K03087  SIG2  [tr:F4MAC6_ECOLX] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sfv:SFV_2757(330)330100.02100(1402)5<> K03087  SIG2  [tr:Q0T1H2_SHIF8] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ssj:SSON53_16960(330)330100.02100(1402)5-> K03087  SIG2  [tr:E7K027_SHISO] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ssn:SSON_2889(330)330100.02100(1402)4-> K03087  SIG2  [tr:Q3YYC1_SHISS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> cro:ROD_30681(330)33099.72096(1402)5<> K03087  SIG2  [tr:D2TLB2_CITRI] rpoS; RNA polymerase sigma factor (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> ebw:BWG_2477(330)33099.72096(1398)4-> K03087  SIG2  [tr:C4ZZP5_ECOBW] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecd:ECDH10B_2909(330)33099.72096(1398)4-> K03087  SIG2  [tr:B1XCR7_ECODH] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> eco:b2741(330)33099.72096(1398)4-> K03087  SIG2  [sp:RPOS_ECOLI] rpoS; RNA polymerase, sigma S (sigma 38) factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ecok:ECMDS42_2246(330)33099.72096(1398)3-> K03087  SIG2  [tr:H0Q9E6_ECOLI] rpoS; RNA polymerase, sigma S (sigma 38) factor; K03087 RNA polymerase nonessential primary-like sigma factor
> ebf:D782_0955(330)33099.72095(1395)4<> K03087  SIG2  [tr:L0LZB7_ENTBF] RNA polymerase, sigma 38 subunit, RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sfe:SFxv_3031(342)33099.72095(1397)5<> K03087  SIG2  [tr:D2AII4_SHIF2] rpoS; RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> sfl:SF2764(342)33099.72095(1397)4<> K03087  SIG2  [sp:RPOS_SHIFL] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ecq:ECED1_3196(330)33099.72092(1394)5-> K03087  SIG2  [tr:B7MZ41_ECO81] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> ect:ECIAI39_2929(330)33099.72092(1394)5<> K03087  SIG2  [tr:B7NT85_ECO7I] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> elo:EC042_2935(330)33099.72092(1394)5<> K03087  SIG2  [tr:D3GRS3_ECO44] rpoS; RNA polymerase sigma factor (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> elp:P12B_c2844(342)33099.72092(1394)7-> K03087  SIG2  [tr:H9UVZ0_ECOLX] rpoS; RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> eoj:ECO26_3810(330)33099.72092(1394)4<> K03087  SIG2  [tr:C8TFY9_ECO26] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> edh:EcDH1_0947(330)33099.72091(1393)5-> K03087  SIG2  [tr:C9R0E0_ECOD1] RpoD subfamily RNA polymerase sigma-70 subunit; K03087 RNA polymerase nonessential primary-like sigma factor
> elx:CDCO157_3355(330)33099.72091(1393)5<> K03087  SIG2  [tr:I1ZZD8_ECOLX] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> etw:ECSP_3689(330)33099.72091(1393)6<> K03087  SIG2  [tr:C6US56_ECO5T] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sdy:SDY_2940(330)33099.72091(1397)4<> K03087  SIG2  [tr:Q32CI9_SHIDS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sdz:Asd1617_03946(342)33099.72091(1397)3<> K03087  SIG2 RNA polymerase sigma factor rpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> cfd:CFNIH1_00730(330)33099.42088(1394)5<> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> cko:CKO_04101(330)33099.42088(1386)4-> K03087  SIG2  [tr:A8ANV4_CITK8] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sbg:SBG_2538(330)33099.42088(1388)3-> K03087  SIG2  [tr:F8VJ08_SALBC] rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> sbo:SBO_2779(331)33199.72088(1390)3-> K03087  SIG2  [tr:Q31XA3_SHIBS] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sbz:A464_2942(330)33099.42088(1388)3-> K03087  SIG2  [tr:S5MTR8_SALBN] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seb:STM474_3064(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sec:SC2856(330)33099.42088(1388)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sed:SeD_A3233(330)33099.42088(1388)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> see:SNSL254_A3129(330)33099.42088(1388)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seeb:SEEB0189_05535(330)33099.42088(1388)5-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seec:CFSAN002050_20935(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seep:I137_13920(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sef:UMN798_3172(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> seh:SeHA_C3113(330)33099.42088(1388)5-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sei:SPC_2966(330)33099.42088(1388)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sej:STMUK_2913(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sek:SSPA2592(330)33099.42088(1388)4-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sel:SPUL_2922(330)33099.42088(1388)3-> K03087  SIG2 rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> sem:STMDT12_C29730(330)33099.42088(1388)4-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senb:BN855_29670(330)33099.42088(1388)3-> K03087  SIG2 SBOV29511; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> send:DT104_29221(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> sene:IA1_14010(330)33099.42088(1388)5-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senh:CFSAN002069_17650(330)33099.42088(1388)5-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senj:CFSAN001992_18920(330)33099.42088(1388)4-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> senn:SN31241_40170(330)33099.42088(1388)3-> K03087  SIG2 RNA polymerase sigma factor; K03087 RNA polymerase nonessential primary-like sigma factor
> sens:Q786_14090(330)33099.42088(1388)3-- K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> seo:STM14_3526(330)33099.42088(1388)5-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> set:SEN2763(330)33099.42088(1388)3-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> setc:CFSAN001921_02455(330)33099.42088(1388)4-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> setu:STU288_14775(330)33099.42088(1388)4-> K03087  SIG2 RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sev:STMMW_28871(330)33099.42088(1388)5-> K03087  SIG2 RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> sew:SeSA_A3074(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sey:SL1344_2903(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> spt:SPA2780(330)33099.42088(1388)4-> K03087  SIG2 rpoS; RNA polymerase sigma subunit RpoS (sigma-38); K03087 RNA polymerase nonessential primary-like sigma factor
> stm:STM2924(330)33099.42088(1388)4-> K03087  SIG2  [sp:RPOS_SALTY] rpoS; RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> sty:STY3049(330)33099.42088(1388)4-> K03087  SIG2  [sp:RPOS_SALTI] rpoS; RNA polymerase sigma subunit RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
> koe:A225_4656(330)33099.12087(1387)5-> K03087  SIG2  [tr:I6X7C4_KLEOX] RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
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