GFIT result for T01100

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

gym:GYMC10_5317
(305 a.a.)
 
--
 
K01971  ligD  [tr:D3EG05_GEOS4] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pih:UB51_17835(294)29375.41558
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pod:PODO_04905(294)29377.81554
0-- K01971  ligD  [tr:A0A089MH67_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psab:PSAB_04965(294)29477.61550(1444)0<- K01971  ligD  [tr:X4ZW24_9BACL] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paej:H70737_05035(294)29376.81544
0-- K01971  ligD  [tr:A0A089IIA5_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paef:R50345_04765(294)29376.81539
0-- K01971  ligD  [tr:A0A089KMM5_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdu:PDUR_06230(294)29475.91530
0<- K01971  ligD  [tr:A0A089HI07_PAEDU] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeh:H70357_05705(294)29375.11529
0<- K01971  ligD  [tr:A0A089HVZ3_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pri:PRIO_1233(294)29375.41515
0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbd:PBOR_05790(295)29075.21513
0<- K01971  ligD  [tr:A0A089LBI8_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pste:PSTEL_06010(293)29074.51508
0<- K01971  ligD  [tr:A0A089LU17_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paen:P40081_06065(294)29374.41502
0<- K01971  ligD  [tr:A0A089IX66_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppm:PPSC2_c1241(300)29670.91497
0-- K01971  ligD  [tr:E3EIA8_PAEPS] DNA polymerase ligd, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppo:PPM_1132(300)29670.91497
0-- K01971  ligD ykoU; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppoy:RE92_05895(300)29670.91497
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppol:X809_06005(300)29670.91492
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppy:PPE_01161(300)29670.91492
0-- K01971  ligD  [tr:E0RM81_PAEP6] DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeq:R50912_05375(294)29374.11487
0<- K01971  ligD  [tr:A0A089JVK0_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppq:PPSQR21_012210(300)29669.91480
0-- K01971  ligD  [tr:W8TTL2_PAEPO] DNA polymerase ligd, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pgm:PGRAT_05830(294)29372.71478
0<- K01971  ligD  [tr:A0A089NDZ2_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paee:R70331_04850(294)29372.41476
0<- K01971  ligD  [tr:A0A089KP77_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paea:R70723_04810(294)29371.31470
0<- K01971  ligD  [tr:A0A089KAB2_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pta:HPL003_14050(300)29669.31449
0-- K01971  ligD  [tr:G7W0E0_PAETH] DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plv:ERIC2_c03270(301)29162.51292(1191)0<- K01971  ligD  [tr:V9W2K7_9BACL] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbj:VN24_04100(301)29064.51289
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tco:Theco_3020(299)29562.71250
2<- K01971  ligD  [tr:L0EHB3_THECK] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pms:KNP414_07351(306)29560.31242(118)1-- K01971  ligD  [tr:F8FPP1_PAEMK] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmq:PM3016_6911(306)29560.31239(687)2-- K01971  ligD  [tr:H6NQP0_9BACL] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmw:B2K_34865(306)29560.31239(111)1-- K01971  ligD  [tr:I0BTY1_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pjd:Pjdr2_4985(304)28860.41192
0<- K01971  ligD  [tr:C6D0J7_PAESJ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033620(298)28547.0948
0<- K01971  ligD  [tr:A0A075R759_BRELA] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbe:BBR47_36590(300)27349.1886
0-- K01971  ligD  [tr:C0ZFS7_BREBN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpf:BpOF4_18445(578)28843.1820
0-- K01971  ligD  [tr:D3FS95_BACPE] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> csd:Clst_1549(290)28044.3820
0<- K01971  ligD ligD1; LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmet:BMMGA3_09875(609)28843.8803
0-- K01971  ligD  [tr:I3E9F3_BACMT] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gst:HW35_02605(609)29042.1798(697)0-- K01971  ligD  [tr:A0A077J3M5_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bco:Bcell_3194(413)26443.2795
0<- K01971  ligD  [tr:E6U0J1_BACCJ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ble:BleG1_3934(601)26844.4795
0-- K01971  ligD  [tr:A0A060LZ04_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lfu:HR49_10880(605)26243.9790
0-- K01971  ligD  [tr:A0A081TIW4_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baco:OXB_3302(607)28341.3781
0-- K01971  ligD  [tr:A0A0A8JMU5_BACSX] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lsp:Bsph_3075(605)26243.5779
1-- K01971  ligD  [tr:B1HPE2_LYSSC] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bif:N288_15905(612)26741.9770(663)0-- K01971  ligD  [tr:U5LC79_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baci:B1NLA3E_13055(622)27841.4769
0-- K01971  ligD  [tr:N0AT41_9BACI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpu:BPUM_1666(621)26444.3760
0-- K01971  ligD  [tr:A8FDM8_BACP2] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drs:DEHRE_05390(294)27541.5759
0<- K01971  ligD  [tr:W0EKJ5_9FIRM] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dec:DCF50_p2127(305)27541.8757
0<- K01971  ligD  [tr:K4L3M4_9FIRM] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ded:DHBDCA_p2113(305)27541.8757
0<- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lgy:T479_10330(605)28440.1757
0-- K01971  ligD  [tr:X2GST2_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> siv:SSIL_2188(613)26541.5746
0-- K01971  ligD  [tr:F2F5S8_SOLSS] DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacw:QR42_08520(610)26443.2737
0-- K01971  ligD  [tr:A0A0B4S8F3_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpum:BW16_09190(621)28140.6730
0-- K01971  ligD  [tr:W8QWG2_BACPU] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bck:BCO26_1265(613)29238.7724
0-- K01971  ligD  [tr:F7Z7D1_BACC6] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bha:BH2209(611)29039.0721
0-- K01971  ligD  [tr:Q9KAS8_BACHD] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bld:BLi01494(616)29139.9721
1-- K01971  ligD  [tr:Q65KL9_BACLD] ykoU; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bli:BL03626(616)29139.9721
1-- K01971  ligD  [tr:Q65KL9_BACLD] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cce:Ccel_0366(304)27342.1720
0<- K01971  ligD  [tr:B8I5T4_CLOCE] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blh:BaLi_c15730(616)28640.2717
0-- K01971  ligD  [tr:R9TTG2_BACLI] ykoU; ATP-dependent DNA ligase subunit YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bag:Bcoa_3265(613)29238.4716
0-- K01971  ligD  [tr:G2TMD9_BACCO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsl:A7A1_1484(611)29037.9716
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamn:BASU_1275(611)28838.2713
0-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bso:BSNT_02251(565)29037.6713
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsn:BSn5_18735(611)29037.6712
0-- K01971  ligD  [tr:E8VIV9_BACST] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bst:GYO_1664(607)30335.6711
0-- K01971  ligD  [tr:G4NV71_BACPT] ykoU; spore germination DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsy:I653_06870(611)29037.6711
0-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacl:BS34A_14860(611)29037.6710
1-- K01971  ligD ligD; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacy:QF06_05715(611)29037.6710
0-- K01971  ligD  [tr:A0A0C5CX88_9BACI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bami:KSO_012785(611)28837.8710
0-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baq:BACAU_1295(607)28837.8710
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsh:BSU6051_13400(611)29037.6710
1-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsp:U712_07000(565)29037.6710
0-- K01971  ligD putative ATP-dependent DNA ligase ykoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsq:B657_13400(611)29037.6710
1-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bss:BSUW23_06875(611)30336.0710
0-- K01971  ligD  [tr:E0U2K3_BACPZ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsu:BSU13400(611)29037.6710
1-- K01971  ligD  [sp:LIGD_BACSU] ligD; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsul:BSUA_01458(611)29037.6710
1-- K01971  ligD ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsus:Q433_07660(611)29037.6710
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsut:BSUB_01458(611)29037.6710
1-- K01971  ligD ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bama:RBAU_1296(611)28837.8709
1-- K01971  ligD  [tr:S6FJH1_BACAM] ykoU; ATP-dependent DNA ligase subunit (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamb:BAPNAU_2446(607)28837.8709
1-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamc:U471_13370(611)28837.8709
0-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baml:BAM5036_1253(611)28837.8709
0-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamp:B938_06845(611)28837.8709(602)0-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamt:AJ82_07560(611)28837.8709(600)0-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamy:V529_12680(611)28837.8709
1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bay:RBAM_013180(611)28837.8709
0-- K01971  ligD  [tr:A7Z3V5_BACA2] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjs:MY9_1468(612)28937.7709
0-- K01971  ligD  [tr:I0F3E9_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmp:NG74_01370(611)28837.8709
0-- K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacp:SB24_03120(611)28837.8708(598)0-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamf:U722_07040(611)28837.8708
0-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bao:BAMF_1421(611)28838.2708
1-- K01971  ligD  [tr:E1USF9_BACAS] ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baz:BAMTA208_10445(611)28838.2708
1-- K01971  ligD ykoU; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcoa:BF29_289(613)29238.4708
0-- K01971  ligD  [tr:A0A0B5X848_BACCO] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bql:LL3_01440(611)28838.2708
1-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxh:BAXH7_02135(611)28838.2708
1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacb:OY17_09685(611)28837.5706
0-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bqy:MUS_1417(611)28837.5706
1-- K01971  ligD  [tr:I2C456_BACAM] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bya:BANAU_1254(607)28837.5706
1-- K01971  ligD  [tr:H8XJU1_BACAM] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsr:I33_1508(607)29037.2705
0-- K01971  ligD ykoU; spore germination DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> clb:Clo1100_0394(303)28240.1705
0<- K01971  ligD  [tr:H2JI29_9CLOT] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsx:C663_1379(611)29037.6704
0-- K01971  ligD  [tr:M4KUB0_BACIU] ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bae:BATR1942_04430(607)28835.8689
0-- K01971  ligD  [tr:E3DXQ0_BACA1] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> batr:TD68_03940(607)28835.8689
0-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...