GFIT result for T01100

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

gym:GYMC10_5317
(305 a.a.)
 
--
 
K01971  ligD  DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pib:BBD41_19405(305)30588.91858(1757)0<> K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pih:UB51_17835(294)29375.41558
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pod:PODO_04905(294)29377.81554
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psab:PSAB_04965(294)29477.61550(1444)0<- K01971  ligD DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paej:H70737_05035(294)29376.81544
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paef:R50345_04765(294)29376.81539
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdu:PDUR_06230(294)29475.91530
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeh:H70357_05705(294)29375.11529
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pri:PRIO_1233(294)29375.41515
0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbd:PBOR_05790(295)29075.21513
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pste:PSTEL_06010(293)29074.51508
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paen:P40081_06065(294)29374.41502
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppm:PPSC2_05990(300)29670.91497
0-- K01971  ligD ykoU; DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppo:PPM_1132(300)29670.91497
0-- K01971  ligD ykoU; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppoy:RE92_05895(300)29670.91497
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppol:X809_06005(300)29670.91492
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppy:PPE_01161(300)29670.91492
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdh:B9T62_38390(294)29373.71488
0<- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeq:R50912_05375(294)29374.11487
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppeo:ABE82_06100(300)29471.11487
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pkb:B4V02_19120(300)29669.91483
0-- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppq:PPSQR21_012210(300)29669.91480
0-- K01971  ligD DNA polymerase ligd, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pgm:PGRAT_05830(294)29372.71478
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paee:R70331_04850(294)29372.41476
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paea:R70723_04810(294)29371.31470
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paih:ASL14_05675(296)29669.91465
0-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pta:HPL003_14050(300)29669.31449
0-- K01971  ligD eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pxl:BS614_10435(296)29669.61449
0<- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pyg:AWM70_01385(296)29667.61397
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnp:IJ22_50340(302)29463.61306
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plv:ERIC2_c03270(301)29162.51292(1191)0<- K01971  ligD DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbj:VN24_04100(301)29064.51289
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pow:IJ21_43260(298)29363.11250
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tco:Theco_3020(299)29562.71250
2<- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pswu:SY83_12925(296)29360.81248
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pms:KNP414_07351(306)29560.31242(118)1-- K01971  ligD DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmq:PM3016_6911(306)29560.31239(687)2-- K01971  ligD DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmw:B2K_34865(306)29560.31239(111)1-- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pjd:Pjdr2_4985(304)28860.41192
0<- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033620(298)28547.0948
0<- K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ntr:B0W44_14280(299)26949.4930
0-- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbe:BBR47_36590(300)27349.1886
0-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bfm:BP422_13605(300)27348.7884
0-- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lfb:C1X05_08340(296)26946.8857
0<- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bhk:B4U37_07665(616)29044.1839
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tab:CIG75_09945(309)30943.4827
0<- K01971  ligD DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpf:BpOF4_18445(578)28843.1820
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> csd:Clst_1549(290)28044.3820
0<- K01971  ligD ligD1; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lys:LBYS11_12515(605)28542.8806
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmet:BMMGA3_09875(609)28843.8803
0-- K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gst:HW35_02605(609)29042.1798(697)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bco:Bcell_3194(413)26443.2795
0<- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ble:BleG1_3934(601)26844.4795
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lfu:HR49_10880(605)26243.9790
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bon:A361_18415(612)29043.1787
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sob:CSE16_07755(609)26542.6787
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baco:OXB_3302(607)28341.3781
0-- K01971  ligD DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lsp:Bsph_3075(605)26243.5779
1-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bif:N288_15905(612)26741.9770(663)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baci:B1NLA3E_13055(622)27841.4769
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lyb:C3943_15830(608)28741.1762
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpu:BPUM_1666(621)26444.3760
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drs:DEHRE_05390(294)27541.5759
0<- K01971  ligD DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dec:DCF50_p2127(305)27541.8757
0<- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ded:DHBDCA_p2113(305)27541.8757
0<- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lgy:T479_10330(605)28440.1757
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> balt:CFN77_09130(621)28140.6746
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> siv:SSIL_2188(613)26541.5746
0-- K01971  ligD predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssil:SOLI23_07720(611)28938.8744
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxi:BK049_18310(621)27642.0741
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpus:UP12_08580(621)26443.2740
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacw:QR42_08520(610)26443.2737
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpum:BW16_09190(621)28140.6730
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rst:ATY39_07945(606)26643.6725
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bck:BCO26_1265(613)29238.7724
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bha:BH2209(611)29039.0721
0-- K01971  ligD BH2209; unknown conserved protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bld:BLi01494(616)29139.9721
1-- K01971  ligD ykoU; ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bli:BL03626(616)29139.9721
1-- K01971  ligD ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cce:Ccel_0366(304)27342.1720
0<- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blh:BaLi_c15730(616)28640.2717
0-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bag:Bcoa_3265(613)29238.4716
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsl:A7A1_1484(611)29037.9716
0-- K01971  ligD Hypothetical protein YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacs:AUL54_03950(611)28837.8714
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamn:BASU_1275(611)28838.2713
0-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bso:BSNT_07827(611)29037.6713
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> balm:BsLM_1418(607)29037.6712
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsn:BSn5_18735(611)29037.6712
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bst:GYO_1664(607)30335.6711
0-- K01971  ligD ykoU; spore germination DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsy:I653_06870(611)29037.6711
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacl:BS34A_14860(611)29037.6710
1-- K01971  ligD ligD; ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacy:QF06_05715(611)29037.6710
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bami:KSO_012785(611)28837.8710
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baq:BACAU_1295(607)28837.8710
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bgi:BGM20_01030(611)29037.6710
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsh:BSU6051_13400(611)29037.6710
1-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsp:U712_07000(565)29037.6710
0-- K01971  ligD putative ATP-dependent DNA ligase ykoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsq:B657_13400(611)29037.6710
1-- K01971  ligD ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bss:BSUW23_06875(611)30336.0710
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsu:BSU13400(611)29037.6710
1-- K01971  ligD  [sp:LIGD_BACSU] ligD; ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsul:BSUA_01458(611)29037.6710
1-- K01971  ligD ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...