GFIT result for
hho
|
GFIT result for
hho
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| hho:HydHO_0636 (146 a.a.) |
-- |
DNA ligase D, 3'-phosphoesterase domain protein | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > hys:HydSN_0651(146) | 146 | 100.0 | 1013 | 0 | <> | DNA ligase D-like 3'-phosphoesterase domain-containing protein | |||
| > hya:HY04AAS1_0647(146) | 146 | 95.2 | 987 | 0 | <> | DNA ligase D, 3'-phosphoesterase domain protein | |||
| > mfz:AOB57_002160(151) | 147 | 63.9 | 630 | 0 | -- | 3'-phosphoesterase | |||
| > mls:MSLAZ_1794(151) | 147 | 63.3 | 624 | 0 | -- | ATP-dependent DNA ligase | |||
| > mbar:MSBR2_2357(151) | 147 | 61.9 | 609 | 0 | -- | ATP-dependent DNA ligase | |||
| > mef:MSWH1_1559(152) | 148 | 62.8 | 609 | 0 | -- | ATP-dependent DNA ligase | |||
| > meq:MSWHS_1751(152) | 148 | 62.8 | 609 | 0 | -- | ATP-dependent DNA ligase | |||
| > mby:MSBRM_2391(151) | 147 | 61.9 | 608 | 0 | -- | ATP-dependent DNA ligase | |||
| > mek:MSKOL_2512(151) | 147 | 62.6 | 607 | 0 | -- | ATP-dependent DNA ligase | |||
| > mev:Metev_0789(152) | 147 | 63.3 | 607 | 0 | -- | DNA ligase D, 3'-phosphoesterase domain protein | |||
| > mvc:MSVAZ_2500(151) | 147 | 62.6 | 606 | 0 | -- | ATP-dependent DNA ligase | |||
| > msj:MSSAC_2457(156) | 151 | 60.3 | 601 | 0 | -- | ATP-dependent DNA ligase | |||
| > msw:MSSIT_2088(156) | 151 | 60.3 | 601 | 0 | -- | ATP-dependent DNA ligase | |||
| > msz:MSSIH_2048(156) | 151 | 60.3 | 601 | 0 | -- | ATP-dependent DNA ligase | |||
| > metm:MSMTP_1128(152) | 148 | 61.5 | 598 | 0 | -- | ATP-dependent DNA ligase clustered with Ku protein, LigD | |||
| > mhaz:BHR79_09895(152) | 146 | 58.9 | 598 | 0 | -- | 3'-phosphoesterase | |||
| > mma:MM_0209(152) | 147 | 60.5 | 596 | 0 | -- | hypothetical protein | |||
| > mba:Mbar_A2115(151) | 147 | 59.9 | 594 | 1 | -- | conserved hypothetical protein | |||
| > mbak:MSBR3_2416(151) | 148 | 61.5 | 594 | 0 | -- | ATP-dependent DNA ligase | |||
| > mbw:MSBRW_2627(151) | 147 | 59.9 | 594 | 1 | -- | ATP-dependent DNA ligase | |||
| > mac:MA_3428(156) | 151 | 58.9 | 591 | 0 | -- | conserved hypothetical protein | |||
| > mpot:BKM01_09630(?) | 146 | 57.5 | 589 | 0 | -- | - | |||
| > mmh:Mmah_0746(152) | 146 | 56.8 | 585 | 0 | -- | DNA ligase D, 3'-phosphoesterase domain protein | |||
| > bbgw:UT28_C0001G0605(500) | 150 | 54.7 | 574 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lcj:NCTC11976_00657(835) | 150 | 53.3 | 552 | 0 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lly:J2N86_14740(835) | 152 | 51.3 | 548 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > geo:Geob_0336(829) | 161 | 52.2 | 542 | 1 | -- | K01971 | ligD | ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lsh:CAB17_19860(836) | 152 | 50.7 | 542 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > barc:AOA65_0304(127) | 126 | 62.7 | 539 | 0 | -- | ATP-dependent DNA ligase | |||
| > cbae:COR50_04330(206) | 154 | 50.6 | 537 | 0 | -- | K01971 | ligD | 3'-phosphoesterase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bbw:BDW_07900(797) | 155 | 55.5 | 536 | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fen:J0383_00790(862) | 159 | 52.8 | 534 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > xyg:R9X41_04155(?) | 152 | 53.3 | 534 | 0 | -- | - | |||
| > mem:Memar_2179(197) | 158 | 51.3 | 533 | 0 | -- | conserved hypothetical protein | |||
| > msum:OH143_05180(197) | 158 | 51.3 | 533 | 0 | -- | DNA ligase | |||
| > ljr:NCTC11533_02075(831) | 150 | 50.0 | 531 | 2 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chf:KTO58_22580(858) | 157 | 50.3 | 530 | 2 | -- | ligD; DNA ligase D | |||
| > tid:Thein_0269(122) | 118 | 63.6 | 530 | 0 | -- | DNA ligase D, 3'-phosphoesterase domain protein | |||
| > brey:MNR06_10285(830) | 156 | 55.1 | 529 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbc:CbuK_0042(815) | 151 | 53.6 | 528 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbg:CbuG_0044(815) | 151 | 53.6 | 528 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fak:FUA48_13215(848) | 160 | 50.0 | 528 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mgin:FRZ54_06270(833) | 160 | 51.2 | 528 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fjg:BB050_02761(853) | 159 | 52.2 | 527 | 2 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bdk:HW988_04250(801) | 154 | 52.6 | 525 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbs:COXBURSA331_A2135(815) | 151 | 53.6 | 525 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbu:CBU_1934(815) | 151 | 53.6 | 525 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ffl:HYN86_19795(853) | 157 | 51.6 | 525 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fpb:NLJ00_16410(849) | 157 | 52.2 | 525 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > llg:44548918_01913(827) | 152 | 48.7 | 525 | 0 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmac:MSMAC_2453(121) | 117 | 65.0 | 525 | 0 | -- | ATP-dependent DNA ligase | |||
| > acta:C1701_04550(477) | 149 | 49.7 | 524 | 9 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fhu:M0M44_22495(856) | 159 | 51.6 | 524 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccas:EIB73_02615(852) | 160 | 50.0 | 523 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dfq:NFI81_06305(920) | 159 | 49.1 | 523 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dyc:NFI80_06055(914) | 159 | 49.1 | 523 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bdz:DOM22_04265(811) | 151 | 53.0 | 522 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mlg:CWB41_08380(858) | 154 | 50.6 | 522 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmab:HQ865_21950(842) | 157 | 51.0 | 522 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cpi:Cpin_0998(861) | 159 | 49.1 | 521 | 3 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dpf:ON006_07675(?) | 156 | 51.3 | 521 | 0 | -- | - | |||
| > csal:NBC122_02418(197) | 160 | 51.2 | 520 | 0 | -- | ligD_1; Multifunctional non-homologous end joining protein LigD | |||
| > ger:KP004_20250(900) | 159 | 51.6 | 520 | 14 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbot:ATE48_11890(826) | 153 | 47.7 | 519 | 2 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ndv:NDEV_1296(148) | 143 | 53.1 | 519 | 0 | -- | Putative ATP-dependent DNA ligase | |||
| > srad:LLW23_12915(826) | 155 | 47.7 | 519 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ave:Arcve_0194(121) | 118 | 61.9 | 518 | 0 | -- | DNA ligase D, 3'-phosphoesterase domain protein | |||
| > cfil:MYF79_04960(846) | 159 | 49.1 | 518 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mchk:MchiMG62_24930(198) | 160 | 50.6 | 518 | 1 | -- | hypothetical protein | |||
| > nck:QVH35_11930(?) | 144 | 52.8 | 517 | 0 | -- | - | |||
| > plh:VT85_02045(484) | 160 | 48.1 | 516 | 3 | -- | K01971 | ligD | ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pye:A6J80_22380(845) | 154 | 48.7 | 516 | 10 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fln:FLA_6428(914) | 159 | 49.1 | 515 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > niu:DSQ19_07500(145) | 144 | 52.1 | 515 | 0 | -- | 3'-phosphoesterase | |||
| > bsto:C0V70_01990(218) | 156 | 51.3 | 514 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pep:AQ505_21600(916) | 160 | 48.1 | 514 | 3 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhoz:GXP67_08250(235) | 159 | 49.7 | 514 | 1 | -- | K01971 | ligD | 3'-phosphoesterase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rva:Rvan_0633(970) | 156 | 50.0 | 514 | 10 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chih:GWR21_20550(855) | 159 | 48.4 | 513 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gsub:KP001_16080(856) | 159 | 50.9 | 513 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmet:MCMEM_1297(133) | 119 | 62.2 | 513 | 0 | -- | ATP-dependent DNA ligase clustered with Ku protein, LigD | |||
| > rlac:QMO75_05810(?) | 156 | 50.6 | 513 | 0 | -- | - | |||
| > chra:F7R58_04555(897) | 159 | 49.1 | 512 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cora:N0B40_18280(200) | 158 | 50.0 | 512 | 0 | -- | 3'-phosphoesterase | |||
| > fcr:HYN56_16840(855) | 157 | 50.3 | 512 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fjo:Fjoh_3303(855) | 157 | 50.3 | 512 | 1 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gbn:GEOBRER4_01130(866) | 159 | 51.6 | 512 | 2 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pgj:QG516_19505(916) | 160 | 48.1 | 512 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > scu:SCE1572_09695(786) | 160 | 49.4 | 512 | 28 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > star:G3545_03265(855) | 151 | 48.3 | 512 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chrc:QGN23_02655(?) | 160 | 50.6 | 511 | 0 | -- | - | |||
| > fei:K9M53_05880(910) | 160 | 48.1 | 511 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcu:PC_RS08790(828) | 164 | 51.8 | 511 | 2 | -- | K01971 | ligD | unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cgn:OK18_17065(904) | 160 | 48.7 | 510 | 5 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chor:MKQ68_05310(952) | 161 | 50.3 | 510 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > melm:C7H73_09480(840) | 151 | 50.3 | 510 | 12 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mzh:Mzhil_1092(195) | 158 | 50.0 | 510 | 0 | -- | DNA ligase D, 3'-phosphoesterase domain protein | |||
| > rci:RRC496(199) | 160 | 52.5 | 510 | 0 | -- | conserved hypothetical protein | |||
| > cbau:H1R16_11785(895) | 159 | 49.7 | 509 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chrj:CHRYMOREF3P_2386(201) | 159 | 49.1 | 509 | 0 | -- | 3'-phosphoesterase | |||