GFIT result for T00001

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

hin:HI1393
(300 a.a.)
 
--
 
K01155  E3.1.21.4  [sp:T2D3_HAEIN] hindIIIR; type II restriction endonuclease; K01155 type II restriction enzyme [EC:3.1.21.4]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> hiu:HIB_15650(258)25898.81628(1525)1<>     [tr:E1X7M9_HAEI1] hypothetical protein
> oac:Oscil6304_4535(304)29934.4476(373)2<-     [tr:K9TPF8_9CYAN] HindIII restriction endonuclease
> bbh:BN112_3111(329)28630.4434
2--     [tr:K4QNA3_BORBO] restriction endonuclease
> bbm:BN115_0292(327)28630.4434
3--     [tr:K0MQQ4_BORBM] restriction endonuclease
> bbr:BB0306(329)28630.4434
2--     [tr:Q7WQM4_BORBR] restriction endonuclease
> bpa:BPP0303(344)28630.4434
1--     [tr:Q7W1P8_BORPA] restriction endonuclease
> bpc:BPTD_0202(333)28630.4434
1--     [tr:F4L957_BORPC] putative restriction endonuclease
> bpe:BP0204(333)28630.4434
0--     [tr:Q7W0D9_BORPE] restriction endonuclease
> bper:BN118_0560(333)28630.4434
1--     [tr:J7RBX7_BORP1] restriction endonuclease
> bpar:BN117_0301(329)28630.1429
1--     [tr:K0MAN6_BORPB] restriction endonuclease
> gma:AciX8_0027(304)24932.5404(296)0<-     [tr:G8NXP2_GRAMM] Restriction endonuclease, type II, HindIII
> ptm:GSPATT00016196001(913)30122.3158(20)10112-- K11136  RTEL1  [tr:A0DE87_PARTE] hypothetical protein ; K11136 regulator of telomere elongation helicase 1 [EC:3.6.4.12]
> cal:CaO19.13714(696)29724.9155(0)2359-- K06679  MAD1  [tr:Q59PD6_CANAL] MAD1; coiled-coil protein; spindle-assembly checkpoint; K06679 mitotic spindle assembly checkpoint protein MAD1
> cmy:102935079(8806)27820.9152(39)3075--    SYNE1; spectrin repeat containing, nuclear envelope 1
> mcd:MCRO_0463(1784)29226.0152(33)150--     [tr:D5E5P6_MYCCM] hypothetical protein
> mmo:MMOB3130(958)30423.0152(31)179--     [tr:Q6KHX7_MYCMO] snf2; SWF/SNF family helicase
> tet:TTHERM_00494600(799)28122.8149(2)12823--    hypothetical protein
> apla:101804467(8787)28922.1148(27)2517--    SYNE1; spectrin repeat containing, nuclear envelope 1
> tva:TVAG_387410(4045)30021.3145(4)13563-- K02331  POL5  [tr:A2FSZ8_TRIVA] viral A-type inclusion protein; K02331 DNA polymerase phi [EC:2.7.7.7]
> bga:BG0224(405)30922.7144(23)65--     [tr:Q662E3_BORGA] fliG-1; flagellar motor switch protein
> phi:102109163(8779)32021.6144(20)2688--    SYNE1; spectrin repeat containing, nuclear envelope 1
> fjo:Fjoh_1860(637)33124.2143(28)82-- K06158  ABCF3  [tr:A5FIR9_FLAJ1] ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3
> psol:S284_02080(463)29923.4143(33)10-- K02027  ABC.MS.S  [tr:U6DYR3_9MOLU] malE; ABC-type maltose/maltodextrin-binding protein; K02027 multiple sugar transport system substrate-binding protein
> rfe:RF_0206(744)31724.6143(37)54--     [tr:Q4UN01_RICFE] hypothetical protein
> bcr:BCAH187_A2248(1671)32422.8141(39)185--     [tr:B7HP76_BACC7] putative prophage LambdaBa02, tape measure protein
> bgb:KK9_0224(405)30922.7141(16)73--     [tr:G8QDH2_BORGR] fliG-1; Flagellar motor switch protein
> bnc:BCN_2060(1671)32422.8141(39)180--     [tr:H0NG50_BACCE] prophage LambdaBa02, tape measure protein
> dpp:DICPUDRAFT_97813(551)25825.6141(11)2975--     [tr:F0ZJZ8_DICPU] hypothetical protein
> fpg:101914203(8686)32219.9140(25)2597--    SYNE1; spectrin repeat containing, nuclear envelope 1
> lba:Lebu_0976(402)29222.3140(15)474--     [tr:C7N9P7_LEPBD] hypothetical protein
> ppa:PAS_chr2-1_0743(1466)29323.2140(25)51--     [tr:C4R1L9_PICPG] Putative protein of unknown function
> sfr:Sfri_3981(520)29020.0140(36)68--     [tr:Q07W08_SHEFN] diguanylate cyclase
> aag:AaeL_AAEL002581(1107)32123.7139(15)1193--     [tr:Q17HS8_AEDAE] structural maintenance of chromosomes 6 smc6
> arc:ABLL_1937(393)29422.8139(11)287--     [tr:G2HXF9_9PROT] hypothetical protein
> fch:102049035(8671)32219.9139(24)2570--    SYNE1; spectrin repeat containing, nuclear envelope 1
> fps:FP1967(636)32424.7139(31)64-- K06158  ABCF3  [tr:A6H107_FLAPJ] Probably involved in regulation of translation initiation; K06158 ATP-binding cassette, subfamily F, member 3
> gga:421640(7237)29720.9139(29)2710--    SYNE1, C6orf98; spectrin repeat containing, nuclear envelope 1
> tmt:Tmath_1430(461)30121.6139
12--     [tr:D7APM6_THEM3] hypothetical protein
> bbg:BGIGA_167(472)17823.6138(31)6--     [tr:I3QG83_9FLAO] cca; tRNA nucleotidyltransferase
> hap:HAPS_2100(680)23424.4138(30)3--     [tr:B8F899_HAEPS] hypothetical protein
> lpp:lpp0160(1372)31524.8138(20)42--     [tr:Q5X8T6_LEGPA] hypothetical protein
> msy:MS53_0127(324)21723.5138(27)31--     [tr:Q4A6S3_MYCS5] hypothetical protein
> tgu:100219932(8749)27121.4138(15)2494--    SYNE1; spectrin repeat containing, nuclear envelope 1
> apal:BN85403110(1024)31623.7137(21)68-- K01153  hsdR hsdR; Type I site-specific restriction-modification system, R (restriction) subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
> bpip:BPP43_03970(671)30027.3137(19)191--     [tr:L0EX09_BRAPL] hypothetical protein
> cam:101490789(1178)27724.2137(14)1529--    putative nuclear matrix constituent protein 1-like protein-like
> sca:Sca_1077(1148)29522.4137(35)121--     [tr:B9DNY5_STACT] hypothetical protein
> ame:551356(7669)28925.6136(5)1942--    nesprin-1-like
> bah:BAMEG_0547(1445)32623.6136(27)176--     [tr:C3L6D0_BACAC] putative prophage LambdaBa02, tape measure protein
> bax:H9401_3892(1445)32623.6136(27)175--     [tr:I0D6P7_BACAN] Prophage LambdaBa02, tape measure protein
> bcd:BARCL_1034(367)26023.8136(19)24--    Bartonella effector protein (Bep); substrate of VirB T4SS
> nis:NIS_0665(472)24522.9136(27)34--     [tr:A6Q2S0_NITSB] outer membrane efflux protein
> ssdc:SSDC_00650(5166)22921.0136(35)102--     [tr:S5RPP0_9PROT] dipP; type I polyketide synthase, PedI-like protein
> eus:EUTSA_v10019870mg(2440)22123.1135(10)1180-- K10400  KIF15  [tr:V4LZS2_THESL] hypothetical protein; K10400 kinesin family member 15
> fma:FMG_0837(565)33625.9135(25)317-- K03631  recN  [tr:B0S1L5_FINM2] DNA repair and genetic recombination protein; K03631 DNA repair protein RecN (Recombination protein N)
> mpu:MYPU_3190(642)28920.8135(15)52--     [tr:Q98QP2_MYCPU] lipoprotein
> aqu:100640040(860)29122.7134(21)1125-- K14000  RRBP1  [tr:I1FLA1_AMPQE] uncharacterized LOC100640040; K14000 ribosome-binding protein 1
> bcw:Q7M_452(585)29822.1134(20)29-- K01876  DARS  [tr:I0FCM5_BORCA] Aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
> csr:Cspa_c09240(467)29225.0134(23)48--     [tr:M1LPD5_9CLOT] mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB (EC:2.-.-.-)
> has:Halsa_1210(965)31723.7134(4)221--     [tr:E4RK89_HALHG] hypothetical protein
> hcr:X271_00546(706)30023.7134(18)223--    hypothetical protein
> ial:IALB_2595(614)31523.8134(12)83--     [tr:I0AMU1_IGNAJ] hypothetical protein
> bgn:BgCN_0045(819)28823.6133(0)225-- K03529  smc  [tr:K0DII2_BORGR] P115 protein; K03529 chromosome segregation protein
> cad:Curi_c11940(520)27321.6133(29)282--     [tr:K0AZJ8_CLOA9] hypothetical protein
> cdu:CD36_11840(692)29323.5133(19)1255-- K06679  MAD1  [tr:B9W9Q4_CANDC] spindle assembly checpkoint protein, putative; K06679 mitotic spindle assembly checkpoint protein MAD1
> fnc:HMPREF0946_01972(1070)21325.4133(2)158--     [tr:C7XSV6_FUSNV] hypothetical protein
> hmg:101239448(441)26920.8133(6)298--    uncharacterized LOC101239448
> mar:MAE_56400(570)16926.6133(12)17--     [tr:B0JHQ0_MICAN] hypothetical protein
> pgu:PGUG_01136(917)21424.3133(20)28-- K13721  APE2  [tr:A5DCY1_PICGU] hypothetical protein; K13721 aminopeptidase 2 [EC:3.4.11.-]
> stai:STAIW_v1c07760(734)23122.9133(5)139-- K02809 K02810  PTS-Scr-EIIB PTS-Scr-EIIC  [tr:S5MCA9_9MOLU] scrA; PTS system sucrose-specific IIBC component; K02809 PTS system, sucrose-specific IIB component [EC:2.7.1.69]; K02810 PTS system, sucrose-specific IIC component
> bdu:BDU_445(585)29822.1132(16)23-- K01876  DARS  [sp:SYDND_BORDL] aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
> efa:EF2016(490)21126.5132(29)8--     [tr:Q833E4_ENTFA] portal protein
> fin:KQS_11310(638)34024.7132(20)68-- K06158  ABCF3  [tr:H8XPW6_FLAIG] Probably involved in regulation of translation initiation; K06158 ATP-binding cassette, subfamily F, member 3
> mal:MAGa6330(1066)31322.4132(21)119-- K01153  hsdR  [tr:D3VR92_MYCA6] restriction modification enzyme subunit HsdR; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
> pfa:PF11_0322(381)14027.1132(5)3005--     [tr:Q8II52_PLAF7] conserved Plasmodium protein
> pfh:PFHG_04818(381)14027.1132(5)2868--    conserved hypothetical protein
> rae:G148_0462(514)23826.1132(24)17-- K07636  phoR  [tr:L7TWN2_RIEAN] hypothetical protein; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
> ran:Riean_1145(514)23826.1132(23)17-- K07636  phoR  [tr:E4TAE6_RIEAD] integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
> rar:RIA_1081(502)23826.1132(23)14-- K07636  phoR  [tr:F0TN51_RIEAR] histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
> swd:Swoo_0597(773)31322.7132(23)7--     [tr:B1KR76_SHEWM] hypothetical protein
> bre:BRE_448(583)29821.8131(14)21-- K01876  DARS  [sp:SYDND_BORRA] aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
> cbi:CLJ_B2677(1193)27823.0131(17)727-- K03529  smc  [tr:C3L0F0_CLOB6] smc; chromosome segregation protein SMC; K03529 chromosome segregation protein
> clv:102090542(8729)27719.5131(14)2509--    SYNE1; spectrin repeat containing, nuclear envelope 1
> fab:101810658(8696)26921.9131(13)2674--    SYNE1; spectrin repeat containing, nuclear envelope 1
> hpys:HPSA20_1588(95)9430.9131(19)1--     [tr:T1UBP6_HELPX] hypothetical protein
> lcm:102359511(1881)28723.7131(18)3538--    CCDC88A; coiled-coil domain containing 88A
> nvi:100123200(7973)30926.2131(14)1859--    nesprin-1-like
> xla:446639(467)14025.7131(11)558-- K07608  NF66  [tr:Q6DDQ8_XENLA] ina-b, ina-a, inexa, nifa, xefiltin, xina; internexin neuronal intermediate filament protein, alpha; K07608 internexin neuronal intermediate filament protein, alpha
> bhr:BH0446(585)30022.0130(6)17-- K01876  DARS  [sp:SYDND_BORHD] aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
> lmi:LMXM_33_2540(869)28022.1130(28)510--     [tr:E9B545_LEIMU] hypothetical protein
> mbr:MONBRDRAFT_32484(505)17925.1130(16)355-- K04515  CAMK2  [tr:A9UZT1_MONBE] hypothetical protein ; K04515 calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17]
> pss:102448457(8770)27821.6130(6)3000--    SYNE1; spectrin repeat containing, nuclear envelope 1
> bmx:BMS_2255(899)31325.9129(18)262--     [tr:E1X485_BACMS] putative DNA-binding protein
> btu:BT0446(585)29922.1129(16)23-- K01876  DARS  [sp:SYDND_BORT9] aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
> cbr:CBG19030(375)30422.4129(15)835--    Hypothetical protein CBG19030
> csg:Cylst_5267(1109)24524.1129(24)20--     [tr:K9X5C2_9NOST] CRISPR-associated protein Csc3
> fbr:FBFL15_2575(636)32822.3129(6)71-- K06158  ABCF3  [tr:G2Z484_FLABF] putative translation initiation protein; K06158 ATP-binding cassette, subfamily F, member 3
> mtr:MTR_4g133120(907)20822.6129(18)88-- K10591  NEDD4  [tr:G7JKJ3_MEDTR] Ubiquitin; K10591 E3 ubiquitin-protein ligase NEDD4 [EC:6.3.2.19]
> ptq:P700755_001729(1217)24525.7129(12)233-- K03546  sbcC  [tr:K4IDD9_PSYTT] exonuclease complex subunit SbcC; K03546 exonuclease SbcC
> pub:SAR11_0443(802)12330.1129(23)33-- K01890  FARSB  [sp:SYFB_PELUB] pheT; phenylalanine-tRNA ligase (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
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