GFIT result for T01001

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

hsa:1277
(1464 a.a.)
 

 
K06236  COL1A  [sp:CO1A1_HUMAN] COL1A1, EDSC, OI1, OI2, OI3, OI4; collagen type I alpha 1; K06236 collagen, type I, alpha
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> ptr:104001053(1464)1464100.010904(3278)2582
K06236  COL1A  [tr:H2QDE6_PANTR] COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> pps:100991060(1464)146499.910894(2956)2050
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> ggo:101130610(1464)146499.810890(2949)2376
K06236  COL1A  [tr:G3RBN8_GORGO] COL1A1; collagen alpha-1(I) chain isoform 1; K06236 collagen, type I, alpha
> mcf:102128759(1464)146499.610874(2967)2412
K06236  COL1A COL1A1; collagen type I alpha 1; K06236 collagen, type I, alpha
> csab:103242943(1464)146499.410849(2957)0
   COL1A1; collagen, type I, alpha 1
> rro:104680270(1464)146499.410844(2942)2146
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> sbq:101051510(1464)146498.910817(2891)0
   COL1A1; collagen alpha-1(I) chain isoform X1
> mcc:574201(1498)149897.310796(2883)2256
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> pon:100438152(1471)147298.610759(3137)2394
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> cjc:100386176(1465)146598.110729(2943)2341
K06236  COL1A collagen alpha-1(I) chain-like; K06236 collagen, type I, alpha
> aml:100476237(1460)146497.710704(2785)1609
K06236  COL1A  [tr:G1M012_AILME] COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> cfa:403651(1460)146497.510688(2742)2946
K06236  COL1A  [sp:CO1A1_CANLF] COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> bta:282187(1463)146497.510687(2751)2656
K06236  COL1A  [sp:CO1A1_BOVIN] COL1A1; collagen type I alpha 1; K06236 collagen, type I, alpha
> fca:101092216(1461)146497.410680(2737)2037
K06236  COL1A  [tr:M3W2F5_FELCA] COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> phd:102328226(1463)146497.110649(2737)1778
K06236  COL1A collagen alpha-1(I) chain-like; K06236 collagen, type I, alpha
> bom:102265105(1472)147396.710625(2693)1831
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> pale:102886463(1459)146496.110542(2631)1748
K06236  COL1A  [tr:L5JRU9_PTEAL] COL1A1; collagen type I alpha 1; K06236 collagen, type I, alpha
> lav:100671297(1455)146496.110532(2626)0
   COL1A1; collagen, type I, alpha 1
> lve:103071971(1463)146495.810516(2634)2226
K06236  COL1A collagen alpha-1(I) chain-like; K06236 collagen, type I, alpha
> chx:100860828(1466)147095.910481(2636)1429
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> oas:443483(1476)147795.310430(2525)2067
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> tup:102469999(1470)147394.610396(2517)1871
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> myb:102259707(1459)146694.710385(2786)1513
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> ngi:103738382(1463)146593.910355(2467)1855
K06236  COL1A Col1a1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> bacu:103019929(1463)146494.410343(2768)1879
K06236  COL1A collagen alpha-1(I) chain-like; K06236 collagen, type I, alpha
> cfr:102510097(1440)147394.410255(2321)1384
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> nle:100604090(1403)146495.410230(2306)1992
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> rno:29393(1453)146492.110158(2664)1799
K06236  COL1A  [sp:CO1A1_RAT] Col1a1, COLIA1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> cge:100759814(1453)146491.910125(2330)1370
K06236  COL1A Col1a1; collagen type I alpha 1; K06236 collagen, type I, alpha
> hgl:101703193(1460)146491.810124(2275)2229
K06236  COL1A Col1a1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> mmu:12842(1453)146491.710120(2335)1780
K06236  COL1A  [sp:CO1A1_MOUSE] Col1a1, Col1a-1, Cola-1, Cola1, Mov-13, Mov13; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> shr:100924667(1454)146591.710077(2207)1526
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> myd:102772822(1442)146492.310048(2205)1581
K06236  COL1A COL1A1; collagen type I alpha 1; K06236 collagen, type I, alpha
> mdo:100019354(1455)146690.89965(3407)1924
K06236  COL1A  [tr:F7CV32_MONDO] COL1A1; collagen type I alpha 1; K06236 collagen, type I, alpha
> fch:102046312(1453)146490.09958(3247)726
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> fpg:101924780(1453)146490.09948(3331)805
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> phi:102104738(1453)146489.79925(2012)1984
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> cjo:107325218(1454)146589.59911(1987)0
K06236  COL1A COL1A1; collagen type I alpha 1; K06236 collagen, type I, alpha
> amj:102565404(1455)146588.29738(2245)1109
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> asn:102376361(1455)146588.19734(1885)919
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> umr:103660945(1399)146490.89644(1815)1420
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> cmy:102934260(1455)146587.09632(2446)741
K06236  COL1A collagen alpha-1(I) chain-like; K06236 collagen, type I, alpha
> pbi:103055359(1455)146686.79631(1712)804
K06236  COL1A COL1A1; collagen type I alpha 1; K06236 collagen, type I, alpha
> acs:100565711(1450)146587.29616(1710)1169
K06236  COL1A col1a1; collagen type I alpha 1; K06236 collagen, type I, alpha
> gja:107112523(1432)146586.19459(1650)0
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> xtr:496414(1449)146483.49197(1385)704
K06236  COL1A  [tr:Q640B2_XENTR] col1a1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> ecb:100033877(1317)146486.49191(1589)1839
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> gga:395532(1383)146484.49141(1565)9
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> xla:380515(1449)146482.79125(1374)350
K06236  COL1A  [tr:Q802B5_XENLA] col1a1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> lcm:102349893(1455)146881.28946(908)520
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> pss:102445411(1411)147879.88676(2181)743
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> mze:101476419(1447)146577.78513(445)974
K06236  COL1A col1a1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> ola:100144368(1446)146478.08510(352)964
K06236  COL1A  [tr:A8QX86_ORYLA] col1; collagen type I alpha 1; K06236 collagen, type I, alpha
> sasa:100286406(1449)146577.38450(33)0
   collagen alpha-1(I) chain
> dre:337158(1447)146477.08370(317)792
K06236  COL1A  [tr:Q6U1J5_DANRE] col1a1a, alpha1(I), cb21, col1a1, sb:cb21, sb:cb384, wu:fa99c12, wu:fb02c06; collagen, type I, alpha 1a; K06236 collagen, type I, alpha
> tru:101076114(1448)146576.28350(344)856
K06236  COL1A collagen alpha-1(I) chain-like; K06236 collagen, type I, alpha
> ptg:102967512(1231)135885.38319(387)1612
K06236  COL1A COL1A1; collagen type I alpha 1; K06236 collagen, type I, alpha
> ocu:100347598(1172)119293.08239(337)2699
K06236  COL1A COL1A1; collagen, type I, alpha 1; K06236 collagen, type I, alpha
> cmk:103190072(1462)146974.18152(985)710
K06236  COL1A collagen alpha-1(I) chain-like; K06236 collagen, type I, alpha
> xma:102229978(1453)146672.98044(457)956
K06236  COL1A collagen alpha-1(I) chain-like; K06236 collagen, type I, alpha
> ssc:100152001(1466)148861.96665(134)2621
K19720  COL3A  [tr:F1RYI8_PIG] COL3A1; collagen, type III, alpha 1; K19720 collagen, type III, alpha
> aam:106499174(1462)148061.26632(83)0
K19720  COL3A COL3A1; collagen, type III, alpha 1; K19720 collagen, type III, alpha
> mgp:100543004(1460)148461.36628(122)794
K19720  COL3A COL3A1; collagen, type III, alpha 1; K19720 collagen, type III, alpha
> clv:102087546(1457)148361.66613(62)821
K19720  COL3A COL3A1; collagen, type III, alpha 1; K19720 collagen, type III, alpha
> tgu:100220437(1461)144262.46604(68)1283
K19720  COL3A COL3A1; collagen, type III, alpha 1; K19720 collagen, type III, alpha
> gfr:102038309(1459)144262.56595(72)780
K19720  COL3A COL3A1; collagen, type III, alpha 1; K19720 collagen, type III, alpha
> ccw:104693726(1456)144462.56589(51)681
K19720  COL3A COL3A1; collagen, type III, alpha 1; K19720 collagen, type III, alpha
> apla:101794718(1364)136963.86556(35)495
K06236  COL1A COL1A2; collagen, type I, alpha 2; K06236 collagen, type I, alpha
> fab:101814652(1364)136664.06526(33)1540
K06236  COL1A COL1A2; collagen type I alpha 2; K06236 collagen, type I, alpha
> oaa:100080810(1411)143759.86125(396)2081
K19720  COL3A COL3A1; collagen type III alpha 1; K19720 collagen, type III, alpha
> tng:GSTEN00032966G001(1403)139860.16078(313)0
   unnamed protein product
> phu:Phum_PHUM411770(1569)147851.45022(905)191
K19719  COL2A  [tr:E0VS48_PEDHC] collagen alpha-2 precursor, putative; K19719 collagen, type II, alpha
> tca:660112(1545)146550.44980(753)230
K19719  COL2A  [tr:D6WN28_TRICA] fibril-forming collagen alpha chain; K19719 collagen, type II, alpha
> spu:373267(1414)139751.74957(1106)944
K19719  COL2A  [tr:Q26634_STRPU] COLP1alpha; alpha-1 collagen; K19719 collagen, type II, alpha
> bfo:BRAFLDRAFT_74779(1294)124256.04953(3164)1021
K19719  COL2A  [tr:C3XSS7_BRAFL] hypothetical protein; K19719 collagen, type II, alpha
> mde:101889347(1541)146849.94877(1097)405
K19719  COL2A collagen alpha-1(I) chain-like; K19719 collagen, type II, alpha
> soc:105208111(1494)140150.94838(718)261
K19719  COL2A collagen alpha-1(I) chain-like; K19719 collagen, type II, alpha
> ame:410038(1501)138751.44828(629)221
K19719  COL2A  [tr:A0A087ZYL7_APIME] GB15988; collagen alpha-1(I) chain-like; K19719 collagen, type II, alpha
> bim:100743696(1508)139051.44821(653)0
   fibril-forming collagen alpha chain-like
> hst:105190388(1509)139250.74773(720)225
K19719  COL2A fibril-forming collagen alpha chain-like; K19719 collagen, type II, alpha
> cfo:105250620(1507)138850.84772(1576)209
K19719  COL2A collagen alpha-1(I) chain-like; K19719 collagen, type II, alpha
> bmor:101746136(1490)145848.34701(696)292
K19719  COL2A fibril-forming collagen alpha chain-like; K19719 collagen, type II, alpha
> pxy:105386025(1489)146248.24669(730)343
K19719  COL2A fibril-forming collagen alpha chain-like; K19719 collagen, type II, alpha
> api:100164192(1757)138049.54628(1505)252
K19719  COL2A  [tr:J9JXT7_ACYPI] collagen alpha-1(I) chain; K19719 collagen, type II, alpha
> aec:105154648(1472)138150.04590(669)194
K19719  COL2A fibril-forming collagen alpha chain-like; K19719 collagen, type II, alpha
> sko:100303513(1173)121254.04571(704)0
K19719  COL2A fibrillar collagen; K19719 collagen, type II, alpha
> crg:105325218(1439)143945.74334(237)524
K19719  COL2A fibril-forming collagen alpha chain-like; K19719 collagen, type II, alpha
> hro:HELRODRAFT_168029(1384)138747.44252(464)215
K06236  COL1A  [tr:T1F028_HELRO] hypothetical protein; K06236 collagen, type I, alpha
> aga:AgaP_AGAP011620(1065)108354.14090(1894)466
K19719  COL2A  [tr:Q7PYX1_ANOGA] AGAP011620-PA; K19719 collagen, type II, alpha
> hmg:100211987(1476)148244.34074(150)84
K19719  COL2A  [tr:A1XVT1_HYDVU] col2; collagen alpha-1(I) chain-like; K19719 collagen, type II, alpha
> dpx:DAPPUDRAFT_307295(1289)132347.14070(1439)0
   hypothetical protein
> aag:AaeL_AAEL005386(1746)147945.04064(1626)256
K19721  COL5AS  [tr:Q17A79_AEDAE] AAEL005386-PA; K19721 collagen, type V/XI/XXIV/XXVII, alpha
> cqu:CpipJ_CPIJ001786(1839)146444.54056(1007)330
K19721  COL5AS  [tr:B0W426_CULQU] collagen alpha chain; K19721 collagen, type V/XI/XXIV/XXVII, alpha
> nve:NEMVE_v1g204742(1400)145444.43992(487)450
K19720  COL3A  [tr:A7S046_NEMVE] hypothetical protein ; K19720 collagen, type III, alpha
> cin:100184583(1695)142844.23960(757)250
K19721  COL5AS collagen alpha-1(V) chain-like; K19721 collagen, type V/XI/XXIV/XXVII, alpha
> obi:106868320(1241)130646.63952(634)0
K19719  COL2A collagen alpha-1(I) chain-like; K19719 collagen, type II, alpha
> lgi:LOTGIDRAFT_194221(1197)121847.93875(983)271
K19719  COL2A  [tr:V4A370_LOTGI] hypothetical protein; K19719 collagen, type II, alpha
> aqu:100638776(1606)139043.43812(265)361
K19721  COL5AS COL5a; collagen alpha-1(I) chain-like; K19721 collagen, type V/XI/XXIV/XXVII, alpha
> smm:Smp_164590(1524)148741.83772(351)115
K19720  COL3A Collagen alpha-1(V) chain precursor; K19720 collagen, type III, alpha
> ter:Tery_0397(1873)118149.13679(2959)15
    [tr:Q119G1_TRIEI] phage Tail Collar
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