GFIT result for
T01001
|
GFIT result for
T01001
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| hsa:1277 (1464 a.a.) |
K06236 | COL1AS | [sp:CO1A1_HUMAN] COL1A1, OI4; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | margin | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|---|
| > ptr:455117(1464) | 1464 | 100.0 | 10904 | (3278) | 4001 | K06236 | COL1AS | [tr:H2QDE6_PANTR] COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > pps:100991060(1464) | 1464 | 99.9 | 10894 | (2956) | 3580 | K06236 | COL1AS | COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > ggo:101130610(1464) | 1464 | 99.8 | 10890 | (2949) | 4064 | K06236 | COL1AS | [tr:G3RBN8_GORGO] COL1A1; collagen alpha-1(I) chain isoform 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > pon:100438152(1468) | 1469 | 98.8 | 10766 | (3144) | 3920 | K06236 | COL1AS | COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > aml:100476237(1460) | 1464 | 97.7 | 10704 | (3099) | 3017 | K06236 | COL1AS | [tr:G1M012_AILME] uncharacterized LOC100476237; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > cfa:403651(1460) | 1464 | 97.5 | 10688 | (2742) | 3999 | K06236 | COL1AS | [sp:CO1A1_CANFA] COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > bta:282187(1463) | 1464 | 97.5 | 10687 | (2751) | 3991 | K06236 | COL1AS | [sp:CO1A1_BOVIN] COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > fca:101092216(1461) | 1464 | 97.4 | 10680 | (2737) | 3285 | K06236 | COL1AS | COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > mcc:574201(1432) | 1472 | 95.8 | 10366 | (2768) | 3768 | K06236 | COL1AS | COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > rno:29393(1453) | 1464 | 92.1 | 10158 | (2664) | 3073 | K06236 | COL1AS | [sp:CO1A1_RAT] Col1a1, COLIA1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > mmu:12842(1453) | 1464 | 91.7 | 10120 | (2619) | 3127 | K06236 | COL1AS | [sp:CO1A1_MOUSE] Col1a1, Col1a-1, Cola-1, Cola1, Mov-13, Mov13; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > shr:100924667(1454) | 1465 | 91.7 | 10077 | (2207) | 3095 | K06236 | COL1AS | COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > mdo:100019354(1455) | 1466 | 90.8 | 9965 | (3407) | 2981 | K06236 | COL1AS | [tr:F7CV32_MONDO] collagen alpha-1(I) chain-like; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > acs:100565711(1450) | 1465 | 87.2 | 9616 | (2920) | 1561 | K06236 | COL1AS | [tr:G1KDW3_ANOCA] col1a1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > xtr:496414(1449) | 1464 | 83.4 | 9197 | (1385) | 1443 | K06236 | COL1AS | [tr:Q640B2_XENTR] uncharacterized LOC496414; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > xla:380515(1449) | 1464 | 82.7 | 9125 | (1374) | 738 | K06236 | COL1AS | [tr:Q802B5_XENLA] col1a1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > ecb:100033877(1304) | 1464 | 85.9 | 9115 | (1513) | 2859 | K06236 | COL1AS | COL1A1; collagen, type I, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > ola:100144368(1446) | 1464 | 78.0 | 8510 | (352) | 2245 | K06236 | COL1AS | [tr:A8QX86_ORYLA] col1; collagen type I alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > dre:337158(1447) | 1464 | 77.0 | 8370 | (317) | 1899 | K06236 | COL1AS | [tr:Q6U1J5_DANRE] col1a1a, alpha1(I), cb21, col1a1, sb:cb21, sb:cb384, wu:fa99c12, wu:fb02c06; collagen, type I, alpha 1a; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > tru:101076114(1448) | 1465 | 76.2 | 8350 | (370) | 1933 | K06236 | COL1AS | collagen alpha-1(I) chain-like; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > gga:395069(1420) | 1394 | 72.5 | 7576 | (929) | 1917 | K06236 | COL1AS | [tr:Q90W37_CHICK] COL2A1; collagen, type II, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > ssc:100152001(1466) | 1488 | 61.9 | 6665 | (134) | 3823 | K06236 | COL1AS | [tr:F1RYI8_PIG] COL3A1; collagen, type III, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > tgu:100220437(1461) | 1442 | 62.4 | 6604 | (68) | 2102 | K06236 | COL1AS | COL3A1; collagen, type III, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > mgp:100543004(1458) | 1493 | 60.6 | 6564 | (159) | 954 | K06236 | COL1AS | COL3A1; collagen, type III, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > oaa:100080810(1416) | 1437 | 59.8 | 6133 | (1807) | 2689 | K06236 | COL1AS | COL3A1; collagen, type III, alpha 1; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > phu:Phum_PHUM411770(1569) | 1478 | 51.4 | 5022 | (905) | 511 | K06236 | COL1AS | [tr:E0VS48_PEDHC] collagen alpha-2 precursor, putative; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > tca:660112(1547) | 1467 | 50.3 | 4966 | (739) | 510 | K06236 | COL1AS | similar to Tubulin tyrosine ligase-like protein 2 (Testis-specific protein NYD-TSPG); K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > spu:373267(1414) | 1397 | 51.7 | 4957 | (1108) | 1920 | K06236 | COL1AS | [tr:Q26634_STRPU] COLP1alpha; alpha-1 collagen; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > bfo:BRAFLDRAFT_74779(1294) | 1242 | 56.0 | 4953 | (3164) | 2068 | K06236 | COL1AS | [tr:C3XSS7_BRAFL] hypothetical protein; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > ame:410038(1501) | 1387 | 51.4 | 4828 | (629) | 589 | K06236 | COL1AS | [tr:H9KG01_APIME] fibril-forming collagen alpha chain-like; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > api:100164192(1757) | 1380 | 49.5 | 4628 | (1505) | 1004 | K06236 | COL1AS | collagen alpha-2(I) chain-like; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > aga:AgaP_AGAP011620(1065) | 1083 | 54.1 | 4090 | (1894) | 1238 | K06236 | COL1AS | [tr:Q7PYX1_ANOGA] AGAP011620-PA; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > hmg:100211987(1475) | 1457 | 45.0 | 4078 | (169) | 144 | K06236 | COL1AS | collagen alpha-2(I) chain-like; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > aag:AaeL_AAEL005386(1746) | 1479 | 45.0 | 4064 | (1626) | 776 | K06236 | COL1AS | [tr:Q17A79_AEDAE] collagen alpha chain, anopheles; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > cqu:CpipJ_CPIJ001786(1839) | 1464 | 44.5 | 4056 | (1007) | 1079 | K06236 | COL1AS | [tr:B0W426_CULQU] collagen alpha chain; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > nve:NEMVE_v1g204742(1400) | 1454 | 44.4 | 3992 | (487) | 858 | K06236 | COL1AS | [tr:A7S046_NEMVE] hypothetical protein ; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > cin:100184583(1695) | 1429 | 44.2 | 3967 | (764) | 551 | collagen alpha-1(XI) chain-like | ||||
| > smm:Smp_164590(1524) | 1487 | 41.8 | 3772 | (351) | 342 | K06236 | COL1AS | Collagen alpha-1(V) chain precursor; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > aqu:100638776(1573) | 1390 | 43.5 | 3723 | (188) | 566 | K06236 | COL1AS | collagen alpha-1(I) chain-like; K06236 collagen, type I/II/III/V/XI/XXIV/XXVII, alpha | ||
| > ter:Tery_0397(1873) | 1181 | 49.1 | 3679 | (2959) | 38 | [tr:Q119G1_TRIEI] phage tail Collar | ||||
| > bmy:Bm1_16850(1761) | 1488 | 42.3 | 3504 | (497) | 261 | K06237 | COL4A | [tr:A8P5B1_BRUMA] collagen alpha 2(IV) chain precursor; K06237 collagen, type IV, alpha | ||
| > isc:IscW_ISCW022619(1711) | 1327 | 44.3 | 3394 | (630) | 1130 | K06237 | COL4A | [tr:B7Q9Z7_IXOSC] glycine rich secreted cement protein, putative (EC:3.4.21.68); K06237 collagen, type IV, alpha | ||
| > tsp:Tsp_04066(1632) | 1446 | 41.8 | 3392 | (310) | 215 | K06237 | COL4A | [tr:E5SHZ9_TRISP] collagen alpha-2(IV) chain; K06237 collagen, type IV, alpha | ||
| > cbr:CBG16372(1758) | 1375 | 41.7 | 3281 | (87) | 938 | K06237 | COL4A | Cbr-let-2; C. briggsae CBR-LET-2 protein; K06237 collagen, type IV, alpha | ||
| > cel:CELE_F01G12.5(1759) | 1377 | 41.7 | 3255 | (114) | 788 | K06237 | COL4A | [sp:CO4A2_CAEEL] let-2; Protein LET-2, isoform B; K06237 collagen, type IV, alpha | ||
| > dae:Dtox_3124(1580) | 1176 | 44.0 | 3251 | (1625) | 25 | [tr:C8W4I9_DESAS] collagen triple helix repeat-containing protein | ||||
| > btm:MC28_2872(1295) | 1141 | 45.2 | 3246 | (965) | 37 | [tr:K0FSE0_BACTU] hypothetical protein | ||||
| > nvi:100119830(1880) | 1467 | 40.1 | 3209 | (243) | 568 | K06237 | COL4A | Cg25c, NV11107; collagen type IV; K06237 collagen, type IV, alpha | ||
| > dmo:Dmoj_GI16977(1783) | 1309 | 43.2 | 3154 | (119) | 670 | K06237 | COL4A | [tr:B4KGC9_DROMO] GI16977 gene product from transcript GI16977-RA; K06237 collagen, type IV, alpha | ||
| > dme:Dmel_CG4145(1779) | 1240 | 43.0 | 3150 | (149) | 910 | K06237 | COL4A | [sp:CO4A1_DROME] Cg25C; Collagen type IV; K06237 collagen, type IV, alpha | ||
| > dvi:Dvir_GJ17223(1778) | 1234 | 43.0 | 3133 | (181) | 654 | K06237 | COL4A | [tr:B4LTV2_DROVI] GJ17223 gene product from transcript GJ17223-RA; K06237 collagen, type IV, alpha | ||
| > dse:Dsec_GM18517(1776) | 1415 | 39.4 | 3103 | (687) | 934 | K06237 | COL4A | [tr:B4I1B5_DROSE] GM18517 gene product from transcript GM18517-RA; K06237 collagen, type IV, alpha | ||
| > bcq:BCQ_4541(1330) | 1128 | 43.0 | 3100 | (75) | 34 | [tr:B9J1C9_BACCQ] bclA; collagen triple helix repeat domain protein | ||||
| > dwi:Dwil_GK24856(1784) | 1313 | 42.3 | 3098 | (218) | 788 | K06237 | COL4A | [tr:B4N109_DROWI] GK24856 gene product from transcript GK24856-RA; K06237 collagen, type IV, alpha | ||
| > dan:Dana_GF15711(1780) | 1199 | 44.0 | 3097 | (230) | 1082 | K06237 | COL4A | [tr:B3MP84_DROAN] GF15711 gene product from transcript GF15711-RA; K06237 collagen, type IV, alpha | ||
| > der:Dere_GG25042(1776) | 1403 | 39.3 | 3080 | (81) | 990 | K06237 | COL4A | [tr:B3N4E4_DROER] GG25042 gene product from transcript GG25042-RA; K06237 collagen, type IV, alpha | ||
| > btt:HD73_5035(1333) | 1126 | 43.0 | 3061 | (1755) | 43 | BclA | ||||
| > dgr:Dgri_GH11482(1771) | 1300 | 41.4 | 3053 | (333) | 619 | K06237 | COL4A | [tr:B4JAS0_DROGR] GH11482 gene product from transcript GH11482-RA; K06237 collagen, type IV, alpha | ||
| > bcb:BCB4264_A3811(1451) | 1128 | 41.9 | 3042 | (6) | 29 | [tr:B7HCI1_BACC4] collagen triple helix repeat protein | ||||
| > dya:Dyak_GE11300(1777) | 1236 | 42.2 | 3039 | (131) | 940 | K06237 | COL4A | [tr:B4P3U6_DROYA] GE11300 gene product from transcript GE11300-RA; K06237 collagen, type IV, alpha | ||
| > dpo:Dpse_GA17987(1783) | 1294 | 41.8 | 3036 | (177) | 1055 | K06237 | COL4A | [tr:Q29L08_DROPS] GA17987 gene product from transcript GA17987-RA; K06237 collagen, type IV, alpha | ||
| > dpe:Dper_GL26543(1864) | 1330 | 41.0 | 3023 | (169) | 926 | K06237 | COL4A | [tr:B4GSI5_DROPE] GL26543 gene product from transcript GL26543-RA; K06237 collagen, type IV, alpha | ||
| > bca:BCE_4868(1321) | 1127 | 43.3 | 3014 | (397) | 30 | [tr:Q72Z02_BACC1] collagen triple helix repeat domain protein | ||||
| > bce:BC4725(1309) | 1153 | 42.8 | 2999 | (991) | 35 | [tr:Q812N4_BACCR] hypothetical protein | ||||
| > bcer:BCK_11550(1279) | 1112 | 43.2 | 2986 | (206) | 29 | collagen triple helix repeat domain-containing protein | ||||
| > btht:H175_ch4826(1225) | 1082 | 42.9 | 2977 | (1707) | 47 | Phage tail fiber protein | ||||
| > bql:LL3_00772(2200) | 1151 | 40.4 | 2915 | (2254) | 34 | [tr:F4EL63_BACAM] Collagen triple helix repeat protein | ||||
| > tad:TRIADDRAFT_60245(1515) | 1265 | 39.7 | 2910 | (2119) | 95 | K06237 | COL4A | [tr:B3S7P5_TRIAD] hypothetical protein; K06237 collagen, type IV, alpha | ||
| > bao:BAMF_0720(2083) | 1145 | 41.0 | 2904 | (1941) | 32 | [tr:E1UNK4_BACAS] RBAM_007760; GXT repeat-containing collagen-like protein | ||||
| > mlo:mlr0587(3145) | 1140 | 40.7 | 2897 | (194) | 203 | [tr:Q98MG7_RHILO] hypothetical protein | ||||
| > bcr:BCAH187_A4862(1170) | 1081 | 42.4 | 2862 | (811) | 39 | [tr:B7HSR4_BACC7] collagen triple helix repeat domain-containing protein | ||||
| > bnc:BCN_4635(1170) | 1081 | 42.4 | 2862 | (864) | 38 | [tr:H0NGJ7_BACCE] hypothetical protein | ||||
| > puv:PUV_05930(1690) | 957 | 44.9 | 2854 | (1541) | 28 | [tr:F8KX76_PARAV] hypothetical protein | ||||
| > bld:BLi00800(1292) | 1021 | 43.9 | 2848 | (816) | 14 | [tr:Q65MH9_BACLD] hypothetical protein | ||||
| > bpu:BPUM_1804(1865) | 1102 | 41.7 | 2844 | (2303) | 13 | [tr:A8FE08_BACP2] triple helix repeat-containing collagen | ||||
| > bli:BL03072(1259) | 1018 | 43.8 | 2814 | (782) | 15 | [tr:Q62XX1_BACLD] hypothetical protein | ||||
| > mbr:MONBRDRAFT_11132(2847) | 1294 | 38.9 | 2804 | (536) | 646 | [tr:A9V8A7_MONBE] hypothetical protein | ||||
| > cbe:Cbei_2588(2411) | 1133 | 39.9 | 2798 | (1082) | 43 | [tr:A6LWL4_CLOB8] triple helix repeat-containing collagen | ||||
| > bcx:BCA_3802(1191) | 925 | 45.6 | 2786 | (845) | 30 | [tr:C1ENE5_BACC3] collagen triple helix repeat protein | ||||
| > bcu:BCAH820_4844(1219) | 1101 | 39.5 | 2698 | (1339) | 31 | [tr:B7JSZ0_BACC0] collagen triple helix repeat domain protein | ||||
| > btk:BT9727_3456(1168) | 916 | 45.4 | 2689 | (279) | 32 | [tr:Q6HF99_BACHK] triple helix repeat-containing collagen | ||||
| > bae:BATR1942_01385(1335) | 1068 | 40.2 | 2667 | (1504) | 25 | [tr:E3E3G3_BACA1] GXT repeat-containing collagen-like protein | ||||
| > fbc:FB2170_16636(1232) | 977 | 41.1 | 2643 | (17) | 22 | [tr:A4ATG0_MARSH] hypothetical protein | ||||
| > pjd:Pjdr2_2517(1321) | 1027 | 41.6 | 2623 | (1308) | 121 | [tr:C6CYL2_PAESJ] collagen | ||||
| > dmi:Desmer_2313(2166) | 1139 | 39.2 | 2596 | (1672) | 30 | [tr:J7IZV8_DESMD] collagen triple helix repeat protein | ||||
| > btn:BTF1_16595(983) | 858 | 43.6 | 2432 | (1252) | 35 | [tr:J3XG39_BACTU] collagen triple helix repeat protein | ||||
| > bcf:bcf_18400(1063) | 822 | 47.0 | 2417 | (471) | 30 | [tr:G8U8P9_BACCE] flagellar hook-length control protein FliK | ||||
| > cpy:Cphy_1694(1148) | 913 | 41.8 | 2397 | (1921) | 28 | [tr:A9KRJ2_CLOPH] triple helix repeat-containing collagen | ||||
| > scl:sce5460(889) | 825 | 47.2 | 2395 | (1560) | 1026 | [tr:A9FYI7_SORC5] collagen alpha 2(I) chain precursor | ||||
| > lsp:Bsph_0411(1142) | 976 | 40.0 | 2318 | (2153) | 24 | [tr:B1HVL9_LYSSC] hypothetical protein | ||||
| > bcg:BCG9842_B0398(951) | 892 | 42.3 | 2297 | (329) | 39 | [tr:B7IKZ3_BACC2] hypothetical protein | ||||
| > bwe:BcerKBAB4_4557(934) | 928 | 40.8 | 2286 | (426) | 37 | [tr:A9VL89_BACWK] triple helix repeat-containing collagen | ||||
| > bti:BTG_25220(930) | 824 | 43.9 | 2251 | (283) | 38 | [tr:J3ZWC6_BACTU] hypothetical protein | ||||
| > bbe:BBR47_03110(1003) | 895 | 41.6 | 2228 | (1986) | 30 | [tr:C0ZIS0_BREBN] collagen like protein | ||||
| > ppo:PPM_2154(875) | 796 | 42.0 | 2160 | (1272) | 14 | [tr:G0VUB0_PAEPO] bclA; collagen alpha-1(XXVII) chain Flags: Precursor | ||||
| > bcl:ABC0473(881) | 713 | 43.6 | 2132 | (1894) | 11 | [tr:Q5WKU1_BACSK] hypothetical protein | ||||
| > btc:CT43_CH4748(885) | 813 | 42.8 | 2123 | (1202) | 36 | [tr:F2HCB0_BACTU] hypothetical protein | ||||
| > mte:CCDC5079_3254(1489) | 1166 | 37.4 | 2044 | (118) | 216 | [tr:F7WDK7_MYCTC] PE PGRS family protein | ||||
| > mtv:RVBD_3514(1489) | 1148 | 37.4 | 2034 | (107) | 218 | [tr:I6X7I5_MYCTU] PE-PGRS family protein | ||||
| > mtl:CCDC5180_3207(1489) | 1167 | 37.4 | 2025 | (94) | 204 | [tr:F7WSP7_MYCTD] PE PGRS family protein | ||||