GFIT result for
T01001
|
GFIT result for
T01001
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| hsa:6326 (2005 a.a.) |
K04834 | SCN2A | [sp:SCN2A_HUMAN] SCN2A, BFIC3, BFIS3, BFNIS, EIEE11, HBA, HBSCI, HBSCII, NAC2, Na(v)1.2, Nav1.2, SCN2A1, SCN2A2; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | margin | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|---|
| > pps:100977262(2005) | 2005 | 99.9 | 13190 | (1609) | 403 | K04834 | SCN2A | SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > ptr:459700(2005) | 2005 | 99.9 | 13188 | (1649) | 402 | K04834 | SCN2A | [tr:H2R6F6_PANTR] SCN2A, SCN2A2; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > mcc:703298(2017) | 2017 | 99.3 | 13156 | (1703) | 409 | K04834 | SCN2A | SCN2A, SCN2A2; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > ggo:101147064(2014) | 2014 | 98.9 | 13067 | (1961) | 391 | K04834 | SCN2A | SCN2A; sodium channel protein type 2 subunit alpha; K04834 voltage-gated sodium channel type II alpha | ||
| > bta:539718(2006) | 2006 | 98.8 | 13052 | (1452) | 454 | K04834 | SCN2A | [tr:E1BMH1_BOVIN] SCN2A, SCN2A1; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > cfa:478773(2006) | 2006 | 98.7 | 13045 | (1439) | 424 | K04834 | SCN2A | [tr:E2R036_CANFA] SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > fca:101080472(2006) | 2006 | 98.6 | 13043 | (1457) | 424 | K04834 | SCN2A | SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > ssc:100515171(2006) | 2006 | 98.6 | 13043 | (3085) | 387 | K04834 | SCN2A | sodium channel protein type 2 subunit alpha-like; K04834 voltage-gated sodium channel type II alpha | ||
| > ecb:100051816(2006) | 2006 | 98.7 | 13041 | (1517) | 402 | K04834 | SCN2A | SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > aml:100484218(2006) | 2006 | 98.5 | 13024 | (1420) | 436 | K04834 | SCN2A | [tr:G1L6X7_AILME] SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > mmu:110876(2006) | 2006 | 98.0 | 12958 | (1383) | 490 | K04834 | SCN2A | [tr:B1AWN6_MOUSE] Scn2a1, 6430408L10, A230052E19Rik, Nav1.2, Scn2a; sodium channel, voltage-gated, type II, alpha 1; K04834 voltage-gated sodium channel type II alpha | ||
| > rno:24766(2005) | 2006 | 97.7 | 12910 | (1396) | 510 | K04834 | SCN2A | [sp:SCN2A_RAT] Scn2a1, NachII, Nav1.2, RII/RIIA, RNSCPIIR, SCN, SCN2A, Scn2a2, ScpII; sodium channel, voltage-gated, type II, alpha 1; K04834 voltage-gated sodium channel type II alpha | ||
| > oaa:100077291(2008) | 2008 | 95.1 | 12676 | (1463) | 319 | K04834 | SCN2A | SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > mdo:100016409(2007) | 2007 | 95.0 | 12649 | (1004) | 436 | K04834 | SCN2A | SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > shr:100917320(2007) | 2007 | 95.0 | 12641 | (1042) | 481 | K04834 | SCN2A | SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > tgu:100217927(2007) | 2007 | 92.3 | 12353 | (450) | 407 | K04834 | SCN2A | SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > gga:395945(2006) | 2006 | 92.2 | 12348 | (354) | 450 | K04834 | SCN2A | SCN2A; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > acs:100559081(2009) | 2009 | 90.8 | 12173 | (718) | 400 | K04834 | SCN2A | scn2a, Nav1.2; sodium channel, voltage-gated, type II, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > mgp:100546506(2002) | 2002 | 89.0 | 11732 | (3126) | 309 | K04834 | SCN2A | sodium channel protein type 2 subunit alpha-like; K04834 voltage-gated sodium channel type II alpha | ||
| > pon:100448260(2009) | 2016 | 87.2 | 11520 | (80) | 534 | K04833 | SCN1A | [tr:H2P7Q0_PONAB] SCN1A; sodium channel, voltage-gated, type I, alpha subunit; K04833 voltage-gated sodium channel type I alpha | ||
| > xtr:100488621(1953) | 2013 | 81.0 | 10671 | (416) | 414 | K04834 | SCN2A | sodium channel protein type 2 subunit alpha-like; K04834 voltage-gated sodium channel type II alpha | ||
| > dre:559447(1996) | 2019 | 79.7 | 10574 | (876) | 542 | K04834 | SCN2A | [tr:Q20JQ8_DANRE] scn1lab; sodium channel, voltage-gated, type I like, alpha b; K04834 voltage-gated sodium channel type II alpha | ||
| > ola:101169841(2009) | 2027 | 79.3 | 10514 | (874) | 536 | K04834 | SCN2A | sodium channel protein type 2 subunit alpha-like; K04834 voltage-gated sodium channel type II alpha | ||
| > tru:446050(2026) | 2040 | 78.0 | 10365 | (732) | 311 | K04834 | SCN2A | sodium channel alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > cin:100180733(2329) | 2178 | 50.1 | 6325 | (2948) | 450 | K04834 | SCN2A | scn1a, scn3a; sodium channel, voltage-gated, type I, alpha subunit; K04834 voltage-gated sodium channel type II alpha | ||
| > ame:409018(2044) | 2027 | 47.1 | 5694 | (1238) | 120 | K05388 | SCNAN | [tr:C9D7C5_APIME] Para; sodium channel protein paralytic; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > nvi:100101930(2084) | 2071 | 46.4 | 5679 | (3418) | 240 | K05388 | SCNAN | Para, NV14617; voltage-gated sodium channel alpha subunit; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > tca:656391(2045) | 2035 | 46.4 | 5651 | (24) | 85 | K05388 | SCNAN | [tr:C9D7C7_TRICA] Para; paralytic A; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > aga:AgaP_AGAP004707(2092) | 2008 | 47.6 | 5647 | (2358) | 552 | K05388 | SCNAN | [tr:A7UUW1_ANOGA tr:Q5TPQ2_ANOGA tr:Q7PJH0_ANOGA] AGAP004707-PA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > der:Dere_GG19319(2130) | 2097 | 46.3 | 5546 | (2282) | 348 | K05388 | SCNAN | [tr:B3NX33_DROER] GG19319 gene product from transcript GG19319-RA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > dme:Dmel_CG9907(2131) | 2097 | 46.3 | 5543 | (2078) | 365 | K05388 | SCNAN | [sp:SCNA_DROME tr:B7Z0Z2_DROME] para; paralytic; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > dan:Dana_GF19518(2136) | 2042 | 47.1 | 5534 | (2208) | 811 | K05388 | SCNAN | [tr:B3MXU0_DROAN] GF19518 gene product from transcript GF19518-RA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > bfo:BRAFLDRAFT_143759(1889) | 1958 | 48.8 | 5517 | (365) | 185 | K05388 | SCNAN | [tr:C3ZY94_BRAFL] hypothetical protein; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > isc:IscW_ISCW002612(2026) | 2033 | 47.2 | 5517 | (3767) | 82 | K05388 | SCNAN | [tr:B7PAQ5_IXOSC] skeletal muscle sodium channel alpha subunit, putative; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > dmo:Dmoj_GI21488(2168) | 2073 | 46.3 | 5454 | (2376) | 555 | K05388 | SCNAN | [tr:B4L5N3_DROMO] GI21488 gene product from transcript GI21488-RA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > dwi:Dwil_GK25247(2201) | 2087 | 46.0 | 5427 | (1574) | 710 | K05388 | SCNAN | [tr:B4NEN8_DROWI] GK25247 gene product from transcript GK25247-RA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > dgr:Dgri_GH24791(2171) | 2116 | 45.1 | 5421 | (1978) | 593 | K05388 | SCNAN | [tr:B4JNC5_DROGR] GH24791 gene product from transcript GH24791-RA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > dvi:Dvir_GJ19029(2171) | 2120 | 45.1 | 5419 | (3367) | 324 | K05388 | SCNAN | [tr:B4M338_DROVI] Dvir_para; paralytic; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > dya:Dyak_GE15966(1885) | 1920 | 46.1 | 4961 | (1689) | 146 | K05388 | SCNAN | [tr:B4PXT9_DROYA] GE15966 gene product from transcript GE15966-RA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > dpo:Dpse_GA22114(2053) | 2097 | 43.3 | 4955 | (1509) | 622 | K05388 | SCNAN | [tr:Q29HM6_DROPS] GA22114 gene product from transcript GA22114-RA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > aag:AaeL_AAEL006019(1900) | 1821 | 45.6 | 4885 | (1615) | 303 | K05388 | SCNAN | [tr:Q177V1_AEDAE tr:Q177V2_AEDAE tr:Q177V3_AEDAE tr:Q177V4_AEDAE] voltage-gated sodium channel; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > phu:Phum_PHUM178020(2203) | 2056 | 39.6 | 4499 | (170) | 1171 | [tr:E0VGC3_PEDHC] sodium channel protein type 2 subunit alpha, putative | ||||
| > dsi:Dsim_GD11909(1809) | 1927 | 40.5 | 4435 | (2959) | 414 | [tr:B4QCM1_DROSI] GD11909 gene product from transcript GD11909-RA | ||||
| > dse:Dsec_GM13396(1674) | 1703 | 45.5 | 4308 | (620) | 109 | K05388 | SCNAN | [tr:B4IF86_DROSE] GM13396 gene product from transcript GM13396-RA; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > spu:588616(2665) | 2124 | 37.2 | 4202 | (2658) | 873 | K05388 | SCNAN | sodium channel protein para-like; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > nve:NEMVE_v1g122010(1534) | 1858 | 38.3 | 3716 | (671) | 136 | [tr:A7SKR1_NEMVE] hypothetical protein | ||||
| > api:100164966(1896) | 1725 | 37.9 | 3398 | (611) | 503 | sodium channel protein 60E-like | ||||
| > hmg:100210184(1877) | 1850 | 33.5 | 3258 | (1643) | 180 | sodium channel protein 1 brain-like | ||||
| > tad:TRIADDRAFT_23340(1557) | 1861 | 34.1 | 3097 | (894) | 84 | [tr:B3RSS4_TRIAD] hypothetical protein | ||||
| > cqu:CpipJ_CPIJ017894(1005) | 1061 | 45.0 | 2881 | (462) | 323 | K05388 | SCNAN | [tr:B0XG20_CULQU] voltage-gated sodium channel; K05388 voltage-gated sodium channel alpha, invertebrate | ||
| > mbr:MONBRDRAFT_22969(1498) | 1841 | 30.5 | 2513 | (2118) | 57 | [tr:A9USM1_MONBE] hypothetical protein | ||||
| > dpe:Dper_GL11199(1219) | 1489 | 31.6 | 1863 | (332) | 48 | [tr:B4GD21_DROPE] GL11199 gene product from transcript GL11199-RA | ||||
| > ptm:GSPATT00024320001(1534) | 1895 | 26.4 | 1860 | (9) | 4245 | [tr:A0E8H4_PARTE] hypothetical protein | ||||
| > cel:CELE_C54D2.5(1844) | 1824 | 26.8 | 1850 | (348) | 210 | K05315 | CACNA1N | [tr:G5EBS2_CAEEL tr:Q7JPB4_CAEEL tr:Q7YZR6_CAEEL tr:Q7Z002_CAEEL tr:Q7Z003_CAEEL] cca-1; Protein CCA-1, isoform E; K05315 voltage-dependent calcium channel alpha 1, invertebrate | ||
| > cbr:CBG16834(1670) | 1779 | 26.5 | 1775 | (284) | 179 | K05315 | CACNA1N | Cbr-cca-1; C. briggsae CBR-CCA-1 protein; K05315 voltage-dependent calcium channel alpha 1, invertebrate | ||
| > bmy:Bm1_05510(1703) | 1751 | 26.6 | 1767 | (219) | 53 | K05315 | CACNA1N | [tr:A8NME3_BRUMA] Voltage-gated calcium channel, T-type, alpha subunit. C. elegans cca-1 ortholog; K05315 voltage-dependent calcium channel alpha 1, invertebrate | ||
| > olu:OSTLU_32140(1701) | 1923 | 25.8 | 1740 | (621) | 83 | [tr:A4RYT5_OSTLU] VIC family transporter: calcium ion channel | ||||
| > pif:PITG_08764(1681) | 1274 | 29.8 | 1706 | (265) | 51 | [tr:D0ND58_PHYIT] Voltage-gated Ion Channel (VIC) Superfamily | ||||
| > ota:Ot06g02260(1665) | 1844 | 25.5 | 1623 | (526) | 45 | [tr:Q017C6_OSTTA] calcium channel alpha-1 chain homolog-Fugu rubripes (ISS) | ||||
| > smm:Smp_020170(2199) | 1949 | 24.8 | 1532 | (35) | 1186 | high voltage-activated calcium channel Cav2A | ||||
| > cre:CHLREDRAFT_194451(2027) | 2244 | 24.6 | 1516 | (4) | 2970 | K04852 | CACNA1E | [tr:A8JF90_CHLRE] CAV2; voltage-gated Ca2+ channel, alpha subunit; K04852 voltage-dependent calcium channel R type alpha-1E | ||
| > vcn:VOLCADRAFT_100594(1729) | 1937 | 25.3 | 1511 | (125) | 2913 | [tr:D8UKK5_VOLCA] hypothetical protein | ||||
| > tps:THAPSDRAFT_22071(1491) | 1142 | 28.6 | 1440 | (1141) | 23 | [tr:B8C0W0_THAPS] hypothetical protein | ||||
| > tsp:Tsp_06495(1540) | 1520 | 26.6 | 1439 | (453) | 72 | K05315 | CACNA1N | [tr:E5SG96_TRISP] transporter, cation channel family; K05315 voltage-dependent calcium channel alpha 1, invertebrate | ||
| > tet:TTHERM_00785850(3024) | 1114 | 27.6 | 1297 | (10) | 13375 | [tr:Q23ZH9_TETTS] cation channel family protein | ||||
| > tcr:504105.130(2725) | 2366 | 21.4 | 999 | (864) | 1366 | [tr:Q4DZ99_TRYCC] calcium channel protein | ||||
| > tbr:Tb10.70.4750(2693) | 2315 | 21.3 | 954 | (796) | 180 | [tr:Q38BV7_TRYB2] calcium channel protein | ||||
| > cnb:CNBD3030(2028) | 1271 | 22.5 | 951 | (811) | 268 | [tr:F5H942_CRYNB] hypothetical protein | ||||
| > cne:CND03320(2028) | 1271 | 22.5 | 951 | (813) | 251 | [tr:Q5KID8_CRYNJ] hypothetical protein | ||||
| > cci:CC1G_12231(1966) | 1139 | 24.6 | 942 | (776) | 447 | [tr:A8P1V4_COPC7] high-affinity cell membrane calcium channel | ||||
| > cgi:CGB_D6010W(2009) | 1155 | 22.3 | 905 | (766) | 184 | [tr:E6R4A3_CRYGW] hypothetical protein | ||||
| > lbz:LBRM_20_0460(2764) | 2306 | 20.9 | 901 | (733) | 1229 | [tr:A4HAG3_LEIBR] putative calcium channel protein | ||||
| > aqu:100638198(1728) | 1282 | 22.5 | 880 | (580) | 158 | K05315 | CACNA1N | voltage-dependent L-type calcium channel subunit alpha-1C-like; K05315 voltage-dependent calcium channel alpha 1, invertebrate | ||
| > scm:SCHCODRAFT_82412(1895) | 1140 | 21.8 | 847 | (693) | 61 | [tr:D8Q6Y7_SCHCM] hypothetical protein | ||||
| > lmi:LMXM_33_0480(2547) | 760 | 25.8 | 846 | (423) | 376 | [tr:E9B4L6_LEIMU] putative calcium channel protein | ||||
| > lbc:LACBIDRAFT_239127(1782) | 1130 | 22.5 | 839 | (703) | 29 | [tr:B0DSH4_LACBS] hypothetical protein | ||||
| > lma:LMJF_34_0480(2555) | 760 | 25.5 | 839 | (433) | 537 | [tr:Q4Q3G0_LEIMA] putative calcium channel protein | ||||
| > ldo:LDBPK_340500(2556) | 759 | 25.3 | 838 | (451) | 612 | [tr:E9BQK4_LEIDB] calcium channel protein, putative | ||||
| > lif:LINJ_34_0500(2556) | 759 | 25.3 | 838 | (450) | 588 | [tr:A4I9L8_LEIIN] putative calcium channel protein | ||||
| > ang:ANI_1_1832074(2100) | 1098 | 22.3 | 835 | (694) | 254 | [tr:A2QQR0_ASPNC] An08g03400; calcium channel subunit Cch1 | ||||
| > afv:AFLA_068440(2090) | 1093 | 22.4 | 834 | (692) | 306 | [tr:B8NJN4_ASPFN] calcium channel subunit Cch1 | ||||
| > cpw:CPC735_033320(2122) | 1105 | 22.7 | 826 | (689) | 169 | [tr:C5P5K6_COCP7] cation channel family protein | ||||
| > cim:CIMG_06961(2104) | 1105 | 22.6 | 824 | (683) | 161 | [tr:J3K9C0_COCIM] hypothetical protein | ||||
| > nfi:NFIA_014520(2124) | 1213 | 21.7 | 823 | (683) | 367 | [tr:A1D2W8_NEOFI] calcium channel subunit Cch1 | ||||
| > abe:ARB_02814(2141) | 1089 | 21.9 | 817 | (669) | 280 | [tr:D4B2Y1_ARTBC] hypothetical protein | ||||
| > tve:TRV_01914(2110) | 1087 | 21.8 | 817 | (672) | 255 | [tr:D4D499_TRIVH] hypothetical protein | ||||
| > pgr:PGTG_08171(2228) | 1093 | 21.7 | 816 | (674) | 2729 | [tr:E3KCH4_PUCGT] hypothetical protein | ||||
| > ztr:MYCGRDRAFT_32076(2040) | 1097 | 21.2 | 809 | (675) | 198 | [tr:F9WWZ4_MYCGM] Ca2+ channel, alpha subunit | ||||
| > afm:AFUA_1G11110(2125) | 1213 | 21.6 | 807 | (668) | 347 | [tr:Q4WSZ4_ASPFU] calcium channel subunit Cch1 | ||||
| > pic:PICST_51869(2206) | 1185 | 22.5 | 799 | (663) | 125 | [tr:A3GFK3_PICST] CCH1; calcium channel protein | ||||
| > spo:SPAC6F6.01(1854) | 1068 | 22.8 | 799 | (651) | 34 | [sp:CCH1_SCHPO] cch1; calcium channel Cch1 | ||||
| > act:ACLA_024440(2126) | 1114 | 21.4 | 792 | (659) | 392 | [tr:A1CQ08_ASPCL] calcium channel subunit Cch1 | ||||
| > pte:PTT_11790(2147) | 1076 | 22.5 | 775 | (635) | 653 | [tr:E3RSD6_PYRTT] hypothetical protein | ||||
| > aor:AOR_1_496074(1996) | 1091 | 22.6 | 772 | (630) | 309 | AO090038000297; calcium channel subunit Cch1 | ||||
| > pno:SNOG_07092(2096) | 1117 | 21.0 | 772 | (641) | 410 | [tr:Q0UMC2_PHANO] hypothetical protein | ||||
| > cal:CaO19.10808(2254) | 1114 | 21.8 | 770 | (0) | 641 | [tr:Q5A936_CANAL] CCH1; likely ion transport protein similar to S. cerevisiae CCH1 (YGR217W) calcium channel | ||||
| > smp:SMAC_04252(2217) | 1103 | 22.5 | 770 | (621) | 983 | [tr:F7W1B0_SORMK] hypothetical protein | ||||
| > cot:CORT_0B10970(2269) | 1107 | 21.7 | 769 | (629) | 294 | [tr:H8X274_CANO9] Cch1 voltage-gated Ca2+ channel of the high affinity calcium uptake system | ||||
| > ctp:CTRG_04411(2284) | 1100 | 22.2 | 767 | (631) | 280 | [tr:C5MEB8_CANTT] similar to alpha-1 calcium channel subunit Cch1 | ||||
| > cdu:CD36_01040(2255) | 1115 | 21.6 | 758 | (622) | 347 | [tr:B9W6R0_CANDC] calcium channel, putative | ||||