GFIT result for
T01001
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| hsa:7124 (233 a.a.) |
  |
K03156  | TNFA  | [sp:TNFA_HUMAN tr:Q5STB3_HUMAN] TNF, DIF, TNF-alpha, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | margin | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|---|
| > pps:100977674(233) | 233 | 100.0 | 1531 | (1226) | 13 | K03156 | TNFA | TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > ggo:101151555(233) | 233 | 99.6 | 1524 | (1226) | 14 | K03156 | TNFA | [tr:G3QT76_GORGO] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > ptr:494186(232) | 233 | 99.1 | 1504 | (1199) | 13 | K03156 | TNFA | [sp:TNFA_PANTR] TNF, TNF-a, TNFA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > pon:100447558(233) | 233 | 97.4 | 1485 | (1182) | 13 | K03156 | TNFA | [tr:H2PII1_PONAB] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > mcc:715467(233) | 233 | 96.1 | 1474 | (1177) | 17 | K03156 | TNFA | [sp:TNFA_MACMU tr:G7MRI3_MACMU] TNF, TNF-ALPHA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > aml:100471563(233) | 233 | 91.0 | 1408 | (1049) | 9 | K03156 | TNFA | [tr:D2I4B3_AILME] tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2 | ||
| > cfa:403922(233) | 233 | 91.0 | 1407 | (1055) | 14 | K03156 | TNFA | [sp:TNFA_CANFA tr:A9LMQ0_CANFA] TNF, TNFA, cTNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > fca:493755(233) | 233 | 89.7 | 1365 | (1012) | 18 | K03156 | TNFA | [sp:TNFA_FELCA] TNF, TNFA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > ssc:397086(232) | 233 | 86.7 | 1303 | (962) | 14 | K03156 | TNFA | [sp:TNFA_PIG tr:B3GDZ6_PIG] TNF, TNFa; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > ecb:100033834(234) | 234 | 85.9 | 1300 | (939) | 13 | K03156 | TNFA | [sp:TNFA_HORSE] TNF, TNF-a, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > mmu:21926(235) | 236 | 78.8 | 1220 | (899) | 12 | K03156 | TNFA | [sp:TNFA_MOUSE tr:Q3U593_MOUSE] Tnf, DIF, TNF-alpha, TNFSF2, TNFalpha, Tnfa, Tnfsf1a; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > bta:280943(234) | 234 | 79.9 | 1219 | (861) | 17 | K03156 | TNFA | [sp:TNFA_BOVIN] TNF, TNF-a, TNF-alpha, TNFa; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > rno:24835(235) | 236 | 78.4 | 1198 | (875) | 10 | K03156 | TNFA | [sp:TNFA_RAT] Tnf, RATTNF, TNF-alpha, Tnfa; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > shr:100921875(232) | 233 | 71.2 | 1095 | (779) | 11 | K03156 | TNFA | [tr:G3VMZ1_SARHA] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > mdo:100023069(232) | 234 | 66.2 | 999 | (666) | 11 | K03156 | TNFA | [tr:F6Z4E0_MONDO] tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2 | ||
| > acs:100561101(234) | 245 | 40.0 | 532 | (44) | 8 | K03156 | TNFA | tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2 | ||
| > oaa:100085643(137) | 142 | 54.9 | 508 | (247) | 7 | K03156 | TNFA | tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2 | ||
| > xla:100137625(225) | 211 | 33.6 | 382 | (186) | 5 | K03156 | TNFA | [tr:A9CPG2_XENLA] tnf, dif, tnf-alpha, tnfa, tnfsf2, xtnf, xtnf-alpha; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > xtr:100134991(227) | 211 | 31.8 | 364 | (79) | 10 | K03156 | TNFA | [tr:A9JPI1_XENTR] tnf, TNF-a, dif, tnf-alpha, tnfa, tnfsf2, xtnf; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2 | ||
| > tru:654303(250) | 232 | 30.6 | 316 | (132) | 9 | K03156 | TNFA | [tr:Q4W8A0_TAKRU] tnfa; tumor necrosis factor alpha; K03156 tumor necrosis factor superfamily, member 2 | ||
| > ola:101172593(226) | 231 | 30.3 | 315 | (13) | 9 | K03156 | TNFA | tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2 | ||
| > dre:405785(234) | 245 | 29.4 | 309 | (63) | 11 | K03156 | TNFA | [tr:Q08CQ3_DANRE] tnfa; tumor necrosis factor a (TNF superfamily, member 2); K03156 tumor necrosis factor superfamily, member 2 | ||
| > tgu:100231136(239) | 219 | 29.2 | 278 | (38) | 8 | K05478 | TNFSF15 | [tr:H0YYA7_TAEGU] TNFSF15; tumor necrosis factor (ligand) superfamily, member 15; K05478 tumor necrosis factor ligand superfamily member 15 | ||
| > gga:429064(253) | 229 | 28.8 | 275 | (3) | 7 | K04389 | TNFSF6 | [tr:Q5CAQ0_CHICK] FASLG, TNFSF6; Fas ligand (TNF superfamily, member 6); K04389 tumor necrosis factor ligand superfamily member 6 | ||
| > mgp:100551315(253) | 227 | 28.2 | 256 | (141) | 6 | K04389 | TNFSF6 | tumor necrosis factor ligand superfamily member 6-like; K04389 tumor necrosis factor ligand superfamily member 6 | ||
| > bfo:BRAFLDRAFT_65431(285) | 175 | 28.6 | 206 | (6) | 14 | K04721 | TNFSF10 | [tr:C3ZDQ4_BRAFL] hypothetical protein; K04721 tumor necrosis factor ligand superfamily member 10 | ||
| > hmg:101238716(342) | 191 | 25.1 | 151 | 0 | uncharacterized LOC101238716 | |||||
| > nve:NEMVE_v1g115283(124) | 129 | 24.8 | 148 | (7) | 4 | K04721 | TNFSF10 | [tr:A7SEG4_NEMVE] hypothetical protein ; K04721 tumor necrosis factor ligand superfamily member 10 | ||
| > spu:100888307(319) | 161 | 29.8 | 148 | (32) | 4 | uncharacterized LOC100888307 | ||||
| > cin:100184195(271) | 159 | 23.3 | 142 | (27) | 2 | uncharacterized LOC100184195 | ||||
| > rbi:RB2501_14434(517) | 215 | 26.5 | 131 | 7 | K00131 | E1.2.1.9 | [tr:A4CKY4_ROBBH] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > cur:cur_0183(401) | 210 | 22.9 | 127 | 3 | [tr:B1VEF4_CORU7] hypothetical protein | |||||
| > cua:CU7111_0190(401) | 210 | 22.4 | 126 | 1 | hypothetical protein | |||||
| > dme:Dmel_CG33521(649) | 175 | 27.4 | 125 | (18) | 405 | [tr:H9XVQ0_DROME tr:Q59DP3_DROME tr:Q59DP4_DROME] CG33521 gene product from transcript CG33521-RC | ||||
| > zga:zobellia_4565(526) | 213 | 24.9 | 124 | 10 | [tr:G0L6W7_ZOBGA] gapN; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.9) | |||||
| > fbr:FBFL15_0591(526) | 196 | 25.5 | 121 | 8 | K00131 | E1.2.1.9 | [tr:G2Z5U4_FLABF] gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9); K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > fjo:Fjoh_4869(526) | 229 | 24.9 | 121 | 11 | K00131 | E1.2.1.9 | [tr:A5FA99_FLAJ1] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > azc:AZC_4434(418) | 211 | 24.2 | 119 | 6 | K01269 | E3.4.11.- | [tr:A8HWI2_AZOC5] aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-] | |||
| > bra:BRADO3106(440) | 187 | 26.2 | 119 | (16) | 15 | K02027 | ABC.MS.S | [tr:A4YSN2_BRASO] ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein | ||
| > srm:SRM_02580(429) | 236 | 27.5 | 119 | () | 8 | K01555 | FAH | [tr:D5HBU6_SALRM] fahA; Fumarylacetoacetate (FAA) hydrolase; K01555 fumarylacetoacetase [EC:3.7.1.2] | ||
| > sru:SRU_2360(429) | 236 | 27.5 | 119 | () | 7 | K01555 | FAH | [tr:Q2S021_SALRD] fahA; fumarylacetoacetase; K01555 fumarylacetoacetase [EC:3.7.1.2] | ||
| > ppu:PP_3443(539) | 231 | 25.5 | 118 | 34 | K00131 | E1.2.1.9 | [tr:Q88HB7_PSEPK] glyceraldehyde-3-phosphate dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > cly:Celly_2751(528) | 154 | 26.6 | 117 | 9 | K00131 | E1.2.1.9 | [tr:F0RAZ1_CELLC] glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9); K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > ppx:T1E_0115(539) | 200 | 26.5 | 117 | 34 | [tr:I7C2U5_PSEPU] gapN; aldehyde dehydrogenase | |||||
| > cao:Celal_3667(527) | 215 | 23.7 | 116 | 10 | K00131 | E1.2.1.9 | [tr:E6X9W1_CELAD] glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9); K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > fbc:FB2170_12276(525) | 195 | 23.6 | 116 | 6 | K00131 | E1.2.1.9 | [tr:A4ASC5_MARSH] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > tve:TRV_06503(1305) | 201 | 23.4 | 116 | (14) | 44 | K10908 | POLRMT | [tr:D4DH48_TRIVH] mitochondrial DNA-directed RNA polymerase, putative; K10908 DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6] | ||
| > abe:ARB_02444(1305) | 201 | 22.9 | 115 | (11) | 50 | K10908 | POLRMT | [tr:D4B1W3_ARTBC] mitochondrial DNA-directed RNA polymerase, putative; K10908 DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6] | ||
| > cnb:CNBE3070(2254) | 203 | 21.7 | 115 | (15) | 44 | K06640 | ATR | [tr:Q55S75_CRYNB] hypothetical protein; K06640 serine/threonine-protein kinase ATR [EC:2.7.11.1] | ||
| > cne:CNE03070(1854) | 203 | 21.7 | 115 | (15) | 43 | K06640 | ATR | [tr:Q5KGM7_CRYNJ] UVSB PI-3 kinase; K06640 serine/threonine-protein kinase ATR [EC:2.7.11.1] | ||
| > saga:M5M_03620(332) | 115 | 29.6 | 115 | () | 7 | K02341 | DPO3D2 | [tr:K4KIX9_9GAMM] DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] | ||
| > dmo:Dmoj_GI13526(390) | 207 | 25.1 | 114 | (7) | 10 | [tr:B4KZD9_DROMO] GI13526 gene product from transcript GI13526-RA | ||||
| > lhe:lhv_0291(1165) | 216 | 25.9 | 114 | 34 | K03723 | mfd | [tr:A8YXI7_LACH4] transcriptional repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] | |||
| > rpb:RPB_2097(441) | 140 | 27.9 | 114 | 6 | [tr:Q2IYA7_RHOP2] twin-arginine translocation pathway signal | |||||
| > sbi:SORBI_02g005340(831) | 102 | 28.4 | 114 | (12) | 322 | [tr:C5XBW8_SORBI] SORBIDRAFT_02g005340, Sb02g005340; hypothetical protein | ||||
| > azo:azo0061(564) | 218 | 22.5 | 113 | 86 | [tr:A1K1H4_AZOSB] hypothetical protein | |||||
| > fra:Francci3_2047(335) | 140 | 25.0 | 113 | 7 | [tr:Q2JBC1_FRASC] hypothetical protein | |||||
| > ppt:PPS_2922(539) | 231 | 25.1 | 113 | 35 | [tr:F8FZ06_PSEPU] aldehyde dehydrogenase | |||||
| > ppuh:B479_14470(539) | 231 | 25.1 | 113 | 28 | [tr:L0FL91_PSEPU] aldehyde dehydrogenase | |||||
| > ali:AZOLI_1493(235) | 110 | 27.3 | 112 | (12) | 13 | [tr:G7Z552_AZOL4] putative flagellar motor protein MotB-like | ||||
| > hau:Haur_4070(517) | 176 | 23.9 | 112 | () | 14 | K02111 | ATPF1A | [sp:ATPA_HERA2] ATP synthase F0F1 subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] | ||
| > lbc:LACBIDRAFT_303348(1301) | 211 | 23.2 | 112 | (6) | 222 | [tr:B0DJC9_LACBS] hypothetical protein | ||||
| > lhl:LBHH_0258(1165) | 216 | 25.5 | 112 | 39 | K03723 | mfd | [tr:F0NUS0_LACHH] Transcriptional repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] | |||
| > mbs:MRBBS_1051(418) | 140 | 28.6 | 112 | () | 11 | K00564 | rsmC | rlmG; ribosomal RNA large subunit methyltransferase G; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] | ||
| > pom:MED152_10235(530) | 198 | 24.2 | 112 | 9 | aldehyde dehydrogenase family protein | |||||
| > ppf:Pput_2321(539) | 231 | 25.1 | 112 | 28 | K00131 | E1.2.1.9 | [tr:A5W2V0_PSEP1] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > ppi:YSA_11271(539) | 231 | 25.1 | 112 | 32 | [tr:I3V565_PSEPU] aldehyde dehydrogenase | |||||
| > ppz:H045_11380(538) | 227 | 23.8 | 112 | 29 | putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | |||||
| > ptm:GSPATT00018204001(4153) | 169 | 21.9 | 112 | 17879 | [tr:A0DLH0_PARTE] hypothetical protein | |||||
| > rha:RHA1_ro02792(324) | 125 | 29.6 | 112 | 53 | [tr:Q0SCY9_RHOSR] alkanal monooxygenase | |||||
| > tmz:Tmz1t_3478(402) | 70 | 38.6 | 112 | 44 | K02004 | ABC.CD.P | [tr:C4KCX4_THASP] hypothetical protein; K02004 putative ABC transport system permease protein | |||
| > ank:AnaeK_1873(240) | 173 | 26.0 | 111 | (10) | 63 | [tr:B4UAK5_ANASK] glycine cleavage system protein H | ||||
| > cap:CLDAP_30040(498) | 244 | 25.4 | 111 | 45 | [tr:I0I706_CALAS] putative two-component histidine kinase | |||||
| > hel:HELO_3546(604) | 131 | 27.5 | 111 | 11 | K07182 | K07182 | [tr:E1V7J2_HALED] hypothetical protein; K07182 CBS domain-containing protein | |||
| > ldo:LDBPK_300830(677) | 140 | 25.7 | 111 | (6) | 137 | [tr:E9BLH6_LEIDB] mitochondrial oligo_U binding protein TBRGG1, putative | ||||
| > pen:PSEEN2956(539) | 231 | 25.1 | 111 | 26 | [tr:Q1I9E8_PSEE4] NAD-dependent aldehyde dehydrogenase (EC:1.2.1.3) | |||||
| > pop:POPTR_798090(667) | 194 | 25.3 | 111 | (3) | 38 | K01876 | DARS | [tr:B9GIN8_POPTR] aminoacyl-tRNA ligase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] | ||
| > ppb:PPUBIRD1_2348(539) | 231 | 25.1 | 111 | 29 | [tr:E4RB81_PSEPB] Glyceraldehyde-3-phosphate dehydrogenase, putative (EC:1.2.1.9) | |||||
| > rpd:RPD_3322(441) | 139 | 27.3 | 111 | 4 | K02027 | ABC.MS.S | [tr:Q134E3_RHOPS] twin-arginine translocation pathway signal; K02027 multiple sugar transport system substrate-binding protein | |||
| > rta:Rta_25430(1266) | 96 | 31.2 | 111 | 348 | K09800 | K09800 | [tr:F5Y2U3_RAMTT] hypothetical protein; K09800 hypothetical protein | |||
| > acp:A2cp1_1958(240) | 173 | 25.4 | 110 | 57 | [tr:B8J7B0_ANAD2] glycine cleavage H-protein | |||||
| > aha:AHA_1294(346) | 102 | 35.3 | 110 | (7) | 24 | [tr:A0KHT4_AERHH] AraC family transcriptional regulator | ||||
| > dse:Dsec_GM17581(774) | 187 | 27.8 | 110 | (3) | 45 | K01490 | E3.5.4.6 | [tr:B4IG82_DROSE] GM17581 gene product from transcript GM17581-RA; K01490 AMP deaminase [EC:3.5.4.6] | ||
| > pte:PTT_17289(657) | 98 | 29.6 | 110 | 92 | [tr:E3S435_PYRTT] hypothetical protein | |||||
| > rpx:Rpdx1_1904(441) | 140 | 27.9 | 110 | 6 | K02027 | ABC.MS.S | [tr:E6VMM6_RHOPX] family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein | |||
| > syw:SYNW2021(262) | 60 | 33.3 | 110 | 2 | K05370 | pebB | [sp:PEBB_SYNPX] pebB; phycoerythrobilin:ferredoxin oxidoreductase (EC:1.3.7.3); K05370 phycoerythrobilin:ferredoxin oxidoreductase [EC:1.3.7.3] | |||
| > bdi:100828484(896) | 118 | 33.1 | 109 | 146 | uncharacterized LOC100828484 | |||||
| > cgi:CGB_E4070C(1922) | 203 | 22.2 | 109 | (2) | 59 | K06640 | ATR | [tr:E6R753_CRYGW] DNA-repair protein rad3; K06640 serine/threonine-protein kinase ATR [EC:2.7.11.1] | ||
| > dgr:Dgri_GH17839(695) | 184 | 23.9 | 109 | (5) | 41 | K01490 | E3.5.4.6 | [tr:B4JWX4_DROGR] GH17839 gene product from transcript GH17839-RA; K01490 AMP deaminase [EC:3.5.4.6] | ||
| > mrd:Mrad2831_4432(858) | 85 | 32.9 | 109 | 343 | [tr:B1M4A3_METRJ] PAS/PAC sensor hybrid histidine kinase | |||||
| > pba:PSEBR_a3015(541) | 227 | 23.3 | 109 | (7) | 45 | K00131 | E1.2.1.9 | [tr:F2KHN3_PSEBN] NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | ||
| > ppg:PputGB1_2493(539) | 217 | 24.9 | 109 | 33 | K00131 | E1.2.1.9 | [tr:B0KRM8_PSEPG] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9] | |||
| > pse:NH8B_3567(754) | 180 | 20.0 | 109 | () | 6 | K01584 | E4.1.1.19A | [tr:G2J019_PSEUL] Orn/Lys/Arg decarboxylase; K01584 arginine decarboxylase [EC:4.1.1.19] | ||
| > rpa:RPA3470(441) | 140 | 27.1 | 109 | 5 | K02027 | ABC.MS.S | [tr:Q6N470_RHOPA] sugar uptake ABC transporter periplasmic solute-binding protein; K02027 multiple sugar transport system substrate-binding protein | |||
| > rpt:Rpal_3960(441) | 140 | 27.1 | 109 | 5 | K02027 | ABC.MS.S | [tr:B3QEV2_RHOPT] family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein | |||
| > syd:Syncc9605_1062(218) | 142 | 27.5 | 109 | 6 | [tr:Q3AKR3_SYNSC] hypothetical protein | |||||
| > tbl:TBLA_0F03610(1144) | 130 | 23.1 | 109 | () | 1441 | K11839 | USP8 | [tr:I2H696_TETBL] TBLA0F03610; hypothetical protein; K11839 ubiquitin carboxyl-terminal hydrolase 8 [EC:3.1.2.15] | ||
| > vfm:VFMJ11_A0600(452) | 128 | 25.8 | 109 | 12 | [tr:B5ETY1_VIBFM] type I secretion outer membrane protein | |||||
| > dev:DhcVS_353(305) | 190 | 26.3 | 108 | 24 | K09695 | nodI | [tr:D2BGR0_DEHSV] ABC transporter ATP-binding protein; K09695 lipooligosaccharide transport system ATP-binding protein | |||
| > maa:MAG_2240(320) | 204 | 21.6 | 108 | 11 | K03551 | ruvB | [tr:A5IY13_MYCAP] ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] | |||