GFIT result for T01001

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

hsa:7124
(233 a.a.)
 

 
K03156  TNFA  [sp:TNFA_HUMAN tr:Q5STB3_HUMAN] TNF, DIF, TNF-alpha, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pps:100977674(233)233100.01531(1226)6
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ggo:101151555(233)23399.61524(1226)6
K03156  TNFA  [tr:G3QT76_GORGO] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ptr:494186(232)23399.11504(1199)7
K03156  TNFA  [sp:TNFA_PANTR] TNF, TNF-a, TNFA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> pon:100447558(233)23397.41485(1182)7
K03156  TNFA  [tr:H2PII1_PONAB] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> nle:100583968(233)23396.11484(1179)6
K03156  TNFA  [tr:G1R2K4_NOMLE] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> mcc:715467(233)23396.11474(1177)8
K03156  TNFA  [sp:TNFA_MACMU tr:G7MRI3_MACMU] TNF, TNF-ALPHA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> mcf:102139631(233)23394.81459(1163)7
K03156  TNFA  [sp:TNFA_MACFA] TNF, Cachectin, TNF-a, TNF-alpha, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> umr:103682322(233)23392.31426(1077)6
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ptg:102958919(233)23391.81413(1060)7
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> aml:100471563(233)23391.01408(1049)7
K03156  TNFA  [tr:D2I4B3_AILME] tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> cfa:403922(233)23391.01407(1055)7
K03156  TNFA  [sp:TNFA_CANFA tr:A9LMQ0_CANFA] TNF, TNFA, cTNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> fca:493755(233)23389.71365(1012)7
K03156  TNFA  [sp:TNFA_FELCA] TNF, TNFA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> pale:102887632(233)23388.41350(990)7
K03156  TNFA  [tr:L5L5E4_PTEAL] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> cjc:100397484(232)23387.61344(1050)6
K03156  TNFA  [sp:TNFA_CALJA] TNF, TNF-a, TNF-alpha, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> bacu:103005897(233)23386.31321(978)8
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> lve:103083231(233)23385.41308(962)7
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ssc:397086(232)23386.71303(962)6
K03156  TNFA  [sp:TNFA_PIG tr:B3GDZ6_PIG] TNF, TNFa; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ecb:100033834(234)23485.91300(939)7
K03156  TNFA  [sp:TNFA_HORSE] TNF, TNF-a, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ngi:103724452(235)23682.21256(966)7
K03156  TNFA Tnf; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> cfr:102510424(233)23381.51243(897)6
K03156  TNFA  [tr:S9XAI4_9CETA] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> myb:102246703(237)23780.21242(880)4
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> myd:102758774(228)23381.11232(985)4
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> tup:102497973(234)23478.21229(878)9
K03156  TNFA  [tr:L9KH66_TUPCH] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> chx:100861232(234)23480.31224(886)7
K03156  TNFA  [sp:TNFA_CAPHI] TNF, Cachectin, TNF-a, TNF-alpha, TNFA, TNFSF2; tumor necrosis factor alpha; K03156 tumor necrosis factor superfamily, member 2
> bom:102277911(234)23479.91219(861)8
K03156  TNFA  [tr:L8I119_9CETA] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> bta:280943(234)23479.91219(861)9
K03156  TNFA  [sp:TNFA_BOVIN] TNF, TNF-a, TNF-alpha, TNFa; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ocu:100009088(234)23579.61217(863)7
K03156  TNFA  [sp:TNFA_RABIT] TNF, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> phd:102321354(234)23479.51213(865)5
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> oas:443540(234)23479.11202(846)7
K03156  TNFA  [sp:TNFA_SHEEP tr:A5YBV0_SHEEP] TNF, TNF-alpha; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> cge:100764780(234)23678.81198(877)6
K03156  TNFA  [tr:G3HZG9_CRIGR] Tnf; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> rno:103694380(235)23678.41198(0)8
    [sp:TNFA_RAT] tumor necrosis factor
> hgl:101718432(230)23376.81185(883)8
K03156  TNFA  [tr:G5C3E2_HETGA] Tnf; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> mmu:21926(219)23473.51111(790)4
K03156  TNFA  [sp:TNFA_MOUSE tr:Q3U593_MOUSE] Tnf, DIF, TNF-a, TNF-alpha, TNFSF2, TNFalpha, Tnfa, Tnfsf1a; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> shr:100921875(232)23371.21095(779)5
K03156  TNFA  [tr:G3VMZ1_SARHA] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> mdo:100023069(232)23466.2999(666)5
K03156  TNFA  [tr:F6Z4E0_MONDO] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> pss:102449532(318)24045.0599(313)6
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> cmy:102936332(239)23943.9596(311)6
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> acs:100561101(390)24540.0532(44)20
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> pbi:103052729(230)23737.1516(292)3
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> oaa:100085643(137)14254.9508(247)3
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> amj:102569751(231)23740.1493(238)4
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> asn:102378738(231)23740.1492(216)4
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> lcm:102357196(237)24537.6427(94)9
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> xla:100137625(225)21133.6382(211)1
K03156  TNFA  [tr:A9CPG2_XENLA] tnf, dif, tnf-alpha, tnfa, tnfsf2, xtnf, xtnf-alpha; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> xtr:100134991(227)21131.8364(79)4
K03156  TNFA  [tr:A9JPI1_XENTR] tnf, TNF-a, dif, tnf-alpha, tnfa, tnfsf2, xtnf; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> tru:654303(250)23230.6316(132)3
K03156  TNFA  [tr:Q4W8A0_TAKRU] tnfa; tumor necrosis factor alpha; K03156 tumor necrosis factor superfamily, member 2
> ola:101172593(226)23130.3315(13)2
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> phi:102099856(309)14637.7310(31)654
   lymphotoxin-alpha-like
> dre:405785(234)24529.4309(63)5
K03156  TNFA  [tr:Q08CQ3_DANRE] tnfa; tumor necrosis factor a (TNF superfamily, member 2); K03156 tumor necrosis factor superfamily, member 2
> xma:102225449(249)14138.3308(51)4
    [tr:M4AFZ9_XIPMA] tumor necrosis factor-like
> mze:101469924(247)16432.3299(30)4
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> cmk:103189288(224)23431.2293(36)10
K05478  TNFSF15 tumor necrosis factor ligand superfamily member 15-like; K05478 tumor necrosis factor ligand superfamily member 15
> fab:101821879(242)24429.1289(46)4
K05478  TNFSF15  [tr:U3JS18_FICAL] TNFSF15; tumor necrosis factor (ligand) superfamily, member 15; K05478 tumor necrosis factor ligand superfamily member 15
> clv:102098274(240)25027.6280(12)4
K05478  TNFSF15 TNFSF15; tumor necrosis factor (ligand) superfamily, member 15; K05478 tumor necrosis factor ligand superfamily member 15
> tgu:100231136(239)21929.2278(38)5
K05478  TNFSF15  [tr:H0YYA7_TAEGU] TNFSF15; tumor necrosis factor (ligand) superfamily, member 15; K05478 tumor necrosis factor ligand superfamily member 15
> gga:429064(253)22928.8275(3)5
K04389  TNFSF6  [tr:Q5CAQ0_CHICK] FASLG, TNFSF6; Fas ligand (TNF superfamily, member 6); K04389 tumor necrosis factor ligand superfamily member 6
> apla:101789486(241)21928.3266(11)7
K05478  TNFSF15  [tr:R0LCQ5_ANAPL] TNFSF15; tumor necrosis factor (ligand) superfamily, member 15; K05478 tumor necrosis factor ligand superfamily member 15
> fch:102056618(241)25026.4257(69)5
K05478  TNFSF15 TNFSF15; tumor necrosis factor (ligand) superfamily, member 15; K05478 tumor necrosis factor ligand superfamily member 15
> fpg:101916678(241)25026.4257(51)6
K05478  TNFSF15 TNFSF15; tumor necrosis factor (ligand) superfamily, member 15; K05478 tumor necrosis factor ligand superfamily member 15
> mgp:100551315(253)22728.2256()1
K04389  TNFSF6 tumor necrosis factor ligand superfamily member 6-like; K04389 tumor necrosis factor ligand superfamily member 6
> bfo:BRAFLDRAFT_65431(285)17528.6206(6)9
K04721  TNFSF10  [tr:C3ZDQ4_BRAFL] hypothetical protein; K04721 tumor necrosis factor ligand superfamily member 10
> lgi:LOTGIDRAFT_237341(317)16829.8181(3)4
   hypothetical protein
> hmg:101238716(342)19125.1151
55
   uncharacterized LOC101238716
> psq:PUNSTDRAFT_116518(297)10430.8137()2
K00772  E2.4.2.28  [tr:R7S265_PUNST] Methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
> aja:AJAP_10300(309)13130.5134
74
   Conserved putative membrane protein
> pvu:PHAVU_007G050800g(350)9230.4114
81
    [tr:V7BCA3_PHAVU] hypothetical protein
> scu:SCE1572_39585(420)10832.4113
19
    [tr:S4Y3M5_SORCE] hypothetical protein
> tmz:Tmz1t_3478(402)7038.6112
15
K02004  ABC.CD.P  [tr:C4KCX4_THASP] hypothetical protein; K02004 putative ABC transport system permease protein
> rta:Rta_25430(1266)9631.2111
55
K09800  K09800  [tr:F5Y2U3_RAMTT] hypothetical protein; K09800 hypothetical protein
> aha:AHA_1294(346)10235.3110
3
    [tr:A0KHT4_AERHH] AraC family transcriptional regulator
> syw:SYNW2021(262)6033.3110
2
K05370  pebB  [sp:PEBB_SYNPX] pebB; phycoerythrobilin:ferredoxin oxidoreductase (EC:1.3.7.3); K05370 phycoerythrobilin:ferredoxin oxidoreductase [EC:1.3.7.3]
> bdi:100828484(896)11833.1109
4
   uncharacterized LOC100828484
> mrd:Mrad2831_4432(858)8532.9109
139
    [tr:B1M4A3_METRJ] PAS/PAC sensor hybrid histidine kinase
> pfo:Pfl01_4086(820)13530.4108
45
    [tr:Q3K8T1_PSEPF] PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
> rge:RGE_30570(463)10433.7108()16
    [tr:I0HTQ9_RUBGI] hypothetical protein
> nve:NEMVE_v1g200880(543)8930.3106
99
    [tr:A7RR53_NEMVE] hypothetical protein
> ang:ANI_1_2322104(743)19830.3105
1
    [tr:A2R0Y5_ASPNC] An12g10280; hypothetical protein
> cti:RALTA_A2115(948)7234.7105
130
K08086  fimV  [tr:B3R118_CUPTR] hypothetical protein; K08086 pilus assembly protein FimV
> smz:SMD_3373(414)10532.4105
6
K13408  raxA  [tr:I0KS49_STEMA] hypothetical protein; K13408 membrane fusion protein RaxA
> sye:Syncc9902_1623(318)5240.4105
4
K00218  E1.3.1.33  [tr:Q3AWT2_SYNS9] protochlorophyllide oxidoreductase (EC:1.3.1.33); K00218 protochlorophyllide reductase [EC:1.3.1.33]
> dds:Ddes_2079(359)9632.3104()0
K08306  mltC  [tr:B8J3G5_DESDA] lytic transglycosylase; K08306 membrane-bound lytic murein transglycosylase C
> gtr:GLOTRDRAFT_56098(306)8931.5104()3
K00772  E2.4.2.28  [tr:S7QKQ3_GLOTA] Methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
> pca:Pcar_1195(141)9036.7104
0
K02387  flgB  [tr:Q3A5B3_PELCD] flgB; flagellar basal body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
> tpr:Tpau_0021(173)9133.0104
3
    [tr:D5UPC3_TSUPD] hypothetical protein
> vsa:VSAL_I1213(200)8834.1104()3
    [tr:B6EJN3_ALISL] transporter LysE family
> aym:YM304_02440(529)4337.2103
8
K14952  namH  [tr:M4ZV40_9ACTN] hypothetical protein; K14952 UDP-MurNAc hydroxylase
> gmx:100815190(543)11330.1103
18
K03217  yidC  [tr:I1LNE2_SOYBN] ALBINO3-like protein 1, chloroplastic-like; K03217 YidC/Oxa1 family membrane protein insertase
> ssm:Spirs_4023(323)12830.5103
9
    [tr:E1R9D8_SPISS] D-isomer specific 2-hydroxyacid dehydrogenase
> bhe:BH11300(580)7335.6102
0
K03587  ftsI  [tr:Q6G2P9_BARHE] ftsI; penicillin-binding protein; K03587 cell division protein FtsI (penicillin-binding protein 3)
> bhn:PRJBM_01092(580)7335.6102
0
K03587  ftsI ftsI; penicillin-binding protein; K03587 cell division protein FtsI (penicillin-binding protein 3)
> bhs:BM1374165_01170(580)7335.6102
0
K03587  ftsI ftsI; penicillin-binding protein; K03587 cell division protein FtsI (penicillin-binding protein 3)
> dfe:Dfer_4824(446)6731.3102
51
    [tr:C6W5T6_DYAFD] PAS/PAC sensor signal transduction histidine kinase
> dpe:Dper_GL26766(2132)13930.9102
11
    [tr:B4H2M0_DROPE] GL26766 gene product from transcript GL26766-RA
> dpo:Dpse_GA23047(2156)13930.9102
9
    [tr:B5DLE7_DROPS] GA23047 gene product from transcript GA23047-RA
> lch:Lcho_1824(342)7230.6102
5
    [tr:B1XZW4_LEPCP] beta-lactamase domain-containing protein
> pbo:PACID_14410(296)12430.6102
10
K10007  gluD  [tr:K7RWD2_PROA4] amino acid ABC transporter membrane protein; K10007 glutamate transport system permease protein
> prm:EW15_2128(485)8032.5102()0
K00971  manC Mannose-1-phosphate guanylyltransferase (GDP) (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
> tgo:TGME49_051460(1490)8431.0102
1350
    [tr:S8EPB1_TOXGO] hypothetical protein
> afs:AFR_29800(211)11331.0101
30
    [tr:U5W8G8_9ACTO] hypothetical protein
> btr:Btr_1597(580)7634.2101
1
K03587  ftsI  [tr:A9IWB2_BART1] ftsI; cell division protein/penicillin-binding protein; K03587 cell division protein FtsI (penicillin-binding protein 3)
... ... ...