GFIT result for T01001

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

hsa:7124
(233 a.a.)
 

 
K03156  TNFA  [sp:TNFA_HUMAN tr:Q5STB3_HUMAN] TNF, DIF, TNF-alpha, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pps:100977674(233)233100.01531(1226)13
K03156  TNFA TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ggo:101151555(233)23399.61524(1226)14
K03156  TNFA  [tr:G3QT76_GORGO] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ptr:494186(232)23399.11504(1199)13
K03156  TNFA  [sp:TNFA_PANTR] TNF, TNF-a, TNFA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> pon:100447558(233)23397.41485(1182)13
K03156  TNFA  [tr:H2PII1_PONAB] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> mcc:715467(233)23396.11474(1177)17
K03156  TNFA  [sp:TNFA_MACMU tr:G7MRI3_MACMU] TNF, TNF-ALPHA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> aml:100471563(233)23391.01408(1049)9
K03156  TNFA  [tr:D2I4B3_AILME] tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> cfa:403922(233)23391.01407(1055)14
K03156  TNFA  [sp:TNFA_CANFA tr:A9LMQ0_CANFA] TNF, TNFA, cTNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> fca:493755(233)23389.71365(1012)18
K03156  TNFA  [sp:TNFA_FELCA] TNF, TNFA; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ssc:397086(232)23386.71303(962)14
K03156  TNFA  [sp:TNFA_PIG tr:B3GDZ6_PIG] TNF, TNFa; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> ecb:100033834(234)23485.91300(939)13
K03156  TNFA  [sp:TNFA_HORSE] TNF, TNF-a, TNFA, TNFSF2; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> mmu:21926(235)23678.81220(899)12
K03156  TNFA  [sp:TNFA_MOUSE tr:Q3U593_MOUSE] Tnf, DIF, TNF-alpha, TNFSF2, TNFalpha, Tnfa, Tnfsf1a; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> bta:280943(234)23479.91219(861)17
K03156  TNFA  [sp:TNFA_BOVIN] TNF, TNF-a, TNF-alpha, TNFa; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> rno:24835(235)23678.41198(875)10
K03156  TNFA  [sp:TNFA_RAT] Tnf, RATTNF, TNF-alpha, Tnfa; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> shr:100921875(232)23371.21095(779)11
K03156  TNFA  [tr:G3VMZ1_SARHA] TNF; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> mdo:100023069(232)23466.2999(666)11
K03156  TNFA  [tr:F6Z4E0_MONDO] tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> acs:100561101(234)24540.0532(44)8
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> oaa:100085643(137)14254.9508(247)7
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> xla:100137625(225)21133.6382(186)5
K03156  TNFA  [tr:A9CPG2_XENLA] tnf, dif, tnf-alpha, tnfa, tnfsf2, xtnf, xtnf-alpha; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> xtr:100134991(227)21131.8364(79)10
K03156  TNFA  [tr:A9JPI1_XENTR] tnf, TNF-a, dif, tnf-alpha, tnfa, tnfsf2, xtnf; tumor necrosis factor; K03156 tumor necrosis factor superfamily, member 2
> tru:654303(250)23230.6316(132)9
K03156  TNFA  [tr:Q4W8A0_TAKRU] tnfa; tumor necrosis factor alpha; K03156 tumor necrosis factor superfamily, member 2
> ola:101172593(226)23130.3315(13)9
K03156  TNFA tumor necrosis factor-like; K03156 tumor necrosis factor superfamily, member 2
> dre:405785(234)24529.4309(63)11
K03156  TNFA  [tr:Q08CQ3_DANRE] tnfa; tumor necrosis factor a (TNF superfamily, member 2); K03156 tumor necrosis factor superfamily, member 2
> tgu:100231136(239)21929.2278(38)8
K05478  TNFSF15  [tr:H0YYA7_TAEGU] TNFSF15; tumor necrosis factor (ligand) superfamily, member 15; K05478 tumor necrosis factor ligand superfamily member 15
> gga:429064(253)22928.8275(3)7
K04389  TNFSF6  [tr:Q5CAQ0_CHICK] FASLG, TNFSF6; Fas ligand (TNF superfamily, member 6); K04389 tumor necrosis factor ligand superfamily member 6
> mgp:100551315(253)22728.2256(141)6
K04389  TNFSF6 tumor necrosis factor ligand superfamily member 6-like; K04389 tumor necrosis factor ligand superfamily member 6
> bfo:BRAFLDRAFT_65431(285)17528.6206(6)14
K04721  TNFSF10  [tr:C3ZDQ4_BRAFL] hypothetical protein; K04721 tumor necrosis factor ligand superfamily member 10
> hmg:101238716(342)19125.1151
0
   uncharacterized LOC101238716
> nve:NEMVE_v1g115283(124)12924.8148(7)4
K04721  TNFSF10  [tr:A7SEG4_NEMVE] hypothetical protein ; K04721 tumor necrosis factor ligand superfamily member 10
> spu:100888307(319)16129.8148(32)4
   uncharacterized LOC100888307
> cin:100184195(271)15923.3142(27)2
   uncharacterized LOC100184195
> rbi:RB2501_14434(517)21526.5131
7
K00131  E1.2.1.9  [tr:A4CKY4_ROBBH] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> cur:cur_0183(401)21022.9127
3
    [tr:B1VEF4_CORU7] hypothetical protein
> cua:CU7111_0190(401)21022.4126
1
   hypothetical protein
> dme:Dmel_CG33521(649)17527.4125(18)405
    [tr:H9XVQ0_DROME tr:Q59DP3_DROME tr:Q59DP4_DROME] CG33521 gene product from transcript CG33521-RC
> zga:zobellia_4565(526)21324.9124
10
    [tr:G0L6W7_ZOBGA] gapN; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.9)
> fbr:FBFL15_0591(526)19625.5121
8
K00131  E1.2.1.9  [tr:G2Z5U4_FLABF] gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9); K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> fjo:Fjoh_4869(526)22924.9121
11
K00131  E1.2.1.9  [tr:A5FA99_FLAJ1] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> azc:AZC_4434(418)21124.2119
6
K01269  E3.4.11.-  [tr:A8HWI2_AZOC5] aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-]
> bra:BRADO3106(440)18726.2119(16)15
K02027  ABC.MS.S  [tr:A4YSN2_BRASO] ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
> srm:SRM_02580(429)23627.5119()8
K01555  FAH  [tr:D5HBU6_SALRM] fahA; Fumarylacetoacetate (FAA) hydrolase; K01555 fumarylacetoacetase [EC:3.7.1.2]
> sru:SRU_2360(429)23627.5119()7
K01555  FAH  [tr:Q2S021_SALRD] fahA; fumarylacetoacetase; K01555 fumarylacetoacetase [EC:3.7.1.2]
> ppu:PP_3443(539)23125.5118
34
K00131  E1.2.1.9  [tr:Q88HB7_PSEPK] glyceraldehyde-3-phosphate dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> cly:Celly_2751(528)15426.6117
9
K00131  E1.2.1.9  [tr:F0RAZ1_CELLC] glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9); K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> ppx:T1E_0115(539)20026.5117
34
    [tr:I7C2U5_PSEPU] gapN; aldehyde dehydrogenase
> cao:Celal_3667(527)21523.7116
10
K00131  E1.2.1.9  [tr:E6X9W1_CELAD] glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9); K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> fbc:FB2170_12276(525)19523.6116
6
K00131  E1.2.1.9  [tr:A4ASC5_MARSH] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> tve:TRV_06503(1305)20123.4116(14)44
K10908  POLRMT  [tr:D4DH48_TRIVH] mitochondrial DNA-directed RNA polymerase, putative; K10908 DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
> abe:ARB_02444(1305)20122.9115(11)50
K10908  POLRMT  [tr:D4B1W3_ARTBC] mitochondrial DNA-directed RNA polymerase, putative; K10908 DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
> cnb:CNBE3070(2254)20321.7115(15)44
K06640  ATR  [tr:Q55S75_CRYNB] hypothetical protein; K06640 serine/threonine-protein kinase ATR [EC:2.7.11.1]
> cne:CNE03070(1854)20321.7115(15)43
K06640  ATR  [tr:Q5KGM7_CRYNJ] UVSB PI-3 kinase; K06640 serine/threonine-protein kinase ATR [EC:2.7.11.1]
> saga:M5M_03620(332)11529.6115()7
K02341  DPO3D2  [tr:K4KIX9_9GAMM] DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
> dmo:Dmoj_GI13526(390)20725.1114(7)10
    [tr:B4KZD9_DROMO] GI13526 gene product from transcript GI13526-RA
> lhe:lhv_0291(1165)21625.9114
34
K03723  mfd  [tr:A8YXI7_LACH4] transcriptional repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
> rpb:RPB_2097(441)14027.9114
6
    [tr:Q2IYA7_RHOP2] twin-arginine translocation pathway signal
> sbi:SORBI_02g005340(831)10228.4114(12)322
    [tr:C5XBW8_SORBI] SORBIDRAFT_02g005340, Sb02g005340; hypothetical protein
> azo:azo0061(564)21822.5113
86
    [tr:A1K1H4_AZOSB] hypothetical protein
> fra:Francci3_2047(335)14025.0113
7
    [tr:Q2JBC1_FRASC] hypothetical protein
> ppt:PPS_2922(539)23125.1113
35
    [tr:F8FZ06_PSEPU] aldehyde dehydrogenase
> ppuh:B479_14470(539)23125.1113
28
    [tr:L0FL91_PSEPU] aldehyde dehydrogenase
> ali:AZOLI_1493(235)11027.3112(12)13
    [tr:G7Z552_AZOL4] putative flagellar motor protein MotB-like
> hau:Haur_4070(517)17623.9112()14
K02111  ATPF1A  [sp:ATPA_HERA2] ATP synthase F0F1 subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
> lbc:LACBIDRAFT_303348(1301)21123.2112(6)222
    [tr:B0DJC9_LACBS] hypothetical protein
> lhl:LBHH_0258(1165)21625.5112
39
K03723  mfd  [tr:F0NUS0_LACHH] Transcriptional repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
> mbs:MRBBS_1051(418)14028.6112()11
K00564  rsmC rlmG; ribosomal RNA large subunit methyltransferase G; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
> pom:MED152_10235(530)19824.2112
9
   aldehyde dehydrogenase family protein
> ppf:Pput_2321(539)23125.1112
28
K00131  E1.2.1.9  [tr:A5W2V0_PSEP1] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> ppi:YSA_11271(539)23125.1112
32
    [tr:I3V565_PSEPU] aldehyde dehydrogenase
> ppz:H045_11380(538)22723.8112
29
   putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
> ptm:GSPATT00018204001(4153)16921.9112
17879
    [tr:A0DLH0_PARTE] hypothetical protein
> rha:RHA1_ro02792(324)12529.6112
53
    [tr:Q0SCY9_RHOSR] alkanal monooxygenase
> tmz:Tmz1t_3478(402)7038.6112
44
K02004  ABC.CD.P  [tr:C4KCX4_THASP] hypothetical protein; K02004 putative ABC transport system permease protein
> ank:AnaeK_1873(240)17326.0111(10)63
    [tr:B4UAK5_ANASK] glycine cleavage system protein H
> cap:CLDAP_30040(498)24425.4111
45
    [tr:I0I706_CALAS] putative two-component histidine kinase
> hel:HELO_3546(604)13127.5111
11
K07182  K07182  [tr:E1V7J2_HALED] hypothetical protein; K07182 CBS domain-containing protein
> ldo:LDBPK_300830(677)14025.7111(6)137
    [tr:E9BLH6_LEIDB] mitochondrial oligo_U binding protein TBRGG1, putative
> pen:PSEEN2956(539)23125.1111
26
    [tr:Q1I9E8_PSEE4] NAD-dependent aldehyde dehydrogenase (EC:1.2.1.3)
> pop:POPTR_798090(667)19425.3111(3)38
K01876  DARS  [tr:B9GIN8_POPTR] aminoacyl-tRNA ligase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
> ppb:PPUBIRD1_2348(539)23125.1111
29
    [tr:E4RB81_PSEPB] Glyceraldehyde-3-phosphate dehydrogenase, putative (EC:1.2.1.9)
> rpd:RPD_3322(441)13927.3111
4
K02027  ABC.MS.S  [tr:Q134E3_RHOPS] twin-arginine translocation pathway signal; K02027 multiple sugar transport system substrate-binding protein
> rta:Rta_25430(1266)9631.2111
348
K09800  K09800  [tr:F5Y2U3_RAMTT] hypothetical protein; K09800 hypothetical protein
> acp:A2cp1_1958(240)17325.4110
57
    [tr:B8J7B0_ANAD2] glycine cleavage H-protein
> aha:AHA_1294(346)10235.3110(7)24
    [tr:A0KHT4_AERHH] AraC family transcriptional regulator
> dse:Dsec_GM17581(774)18727.8110(3)45
K01490  E3.5.4.6  [tr:B4IG82_DROSE] GM17581 gene product from transcript GM17581-RA; K01490 AMP deaminase [EC:3.5.4.6]
> pte:PTT_17289(657)9829.6110
92
    [tr:E3S435_PYRTT] hypothetical protein
> rpx:Rpdx1_1904(441)14027.9110
6
K02027  ABC.MS.S  [tr:E6VMM6_RHOPX] family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
> syw:SYNW2021(262)6033.3110
2
K05370  pebB  [sp:PEBB_SYNPX] pebB; phycoerythrobilin:ferredoxin oxidoreductase (EC:1.3.7.3); K05370 phycoerythrobilin:ferredoxin oxidoreductase [EC:1.3.7.3]
> bdi:100828484(896)11833.1109
146
   uncharacterized LOC100828484
> cgi:CGB_E4070C(1922)20322.2109(2)59
K06640  ATR  [tr:E6R753_CRYGW] DNA-repair protein rad3; K06640 serine/threonine-protein kinase ATR [EC:2.7.11.1]
> dgr:Dgri_GH17839(695)18423.9109(5)41
K01490  E3.5.4.6  [tr:B4JWX4_DROGR] GH17839 gene product from transcript GH17839-RA; K01490 AMP deaminase [EC:3.5.4.6]
> mrd:Mrad2831_4432(858)8532.9109
343
    [tr:B1M4A3_METRJ] PAS/PAC sensor hybrid histidine kinase
> pba:PSEBR_a3015(541)22723.3109(7)45
K00131  E1.2.1.9  [tr:F2KHN3_PSEBN] NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> ppg:PputGB1_2493(539)21724.9109
33
K00131  E1.2.1.9  [tr:B0KRM8_PSEPG] aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]
> pse:NH8B_3567(754)18020.0109()6
K01584  E4.1.1.19A  [tr:G2J019_PSEUL] Orn/Lys/Arg decarboxylase; K01584 arginine decarboxylase [EC:4.1.1.19]
> rpa:RPA3470(441)14027.1109
5
K02027  ABC.MS.S  [tr:Q6N470_RHOPA] sugar uptake ABC transporter periplasmic solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
> rpt:Rpal_3960(441)14027.1109
5
K02027  ABC.MS.S  [tr:B3QEV2_RHOPT] family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
> syd:Syncc9605_1062(218)14227.5109
6
    [tr:Q3AKR3_SYNSC] hypothetical protein
> tbl:TBLA_0F03610(1144)13023.1109()1441
K11839  USP8  [tr:I2H696_TETBL] TBLA0F03610; hypothetical protein; K11839 ubiquitin carboxyl-terminal hydrolase 8 [EC:3.1.2.15]
> vfm:VFMJ11_A0600(452)12825.8109
12
    [tr:B5ETY1_VIBFM] type I secretion outer membrane protein
> dev:DhcVS_353(305)19026.3108
24
K09695  nodI  [tr:D2BGR0_DEHSV] ABC transporter ATP-binding protein; K09695 lipooligosaccharide transport system ATP-binding protein
> maa:MAG_2240(320)20421.6108
11
K03551  ruvB  [tr:A5IY13_MYCAP] ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
... ... ...