GFIT result for T01407

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ipa:Isop_0204
(159 a.a.)
 
--
 
    hypothetical protein
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pbs:Plabr_0882(147)14841.2310
0--    putative ATP-dependent DNA ligase
> pbor:BSF38_00891(129)13939.6283
0--    hypothetical protein
> saci:Sinac_6085(122)13738.7280
0--    hypothetical protein
> ges:VT84_29070(117)12736.2240
0--    hypothetical protein
> ttf:THTE_3213(123)15236.2240
0--    hypothetical protein
> pdx:Psed_3272(661)16832.7209(99)49-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tid:Thein_0269(122)12931.8205
0--    DNA ligase D, 3'-phosphoesterase domain protein
> ncy:NOCYR_0694(786)12631.0200
8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_13660(149)14236.6200
0--    hypothetical protein
> pfg:AB870_14550(837)16132.9197()0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fmr:Fuma_01668(114)9343.0193
0--    hypothetical protein
> mts:MTES_3162(825)15131.8190(89)13-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mek:MSKOL_2512(151)13930.9188
0--    ATP-dependent DNA ligase
> mvc:MSVAZ_2500(151)13930.9188
0--    ATP-dependent DNA ligase
> nbr:O3I_003805(771)13829.0188
10-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mac:MA_3428(156)13928.1187
0--    conserved hypothetical protein
> cai:Caci_5248(495)16529.7185(82)9-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mef:MSWH1_1559(152)13929.5183
0--    ATP-dependent DNA ligase
> meq:MSWHS_1751(152)13929.5183
0--    ATP-dependent DNA ligase
> bcv:Bcav_0653(816)16128.0182(80)9-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cna:AB433_09865(843)16426.8182(76)2-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bne:DA69_02155(844)14830.4180
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msj:MSSAC_2457(156)13928.1180
0--    ATP-dependent DNA ligase
> msw:MSSIT_2088(156)13928.1180
0--    ATP-dependent DNA ligase
> msz:MSSIH_2048(156)13928.1180
0--    ATP-dependent DNA ligase
> pir:VN12_23005(193)16028.1179
0--    hypothetical protein
> mbar:MSBR2_2357(151)13929.5177
0--    ATP-dependent DNA ligase
> cmc:CMN_02036(834)16431.1176(76)9-- K01971  ligD ligD; Cmm ortholog CMM_2074; Cms ortholog CMS_1156 (pseudogene); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kphy:AOZ06_15230(477)16527.3176(75)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mba:Mbar_A2115(151)13927.3176
1--    conserved hypothetical protein
> mbw:MSBRW_2627(151)13927.3176
1--    ATP-dependent DNA ligase
> mma:MM_0209(152)13926.6175
0--    hypothetical protein
> mau:Micau_1144(344)15328.1174(56)14-- K01971  ligD DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mls:MSLAZ_1794(151)13929.5174
0--    ATP-dependent DNA ligase
> nsr:NS506_07750(754)12828.1174
0-- K01971  ligD DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> metm:MSMTP_1128(152)14127.0173
0--    ATP-dependent DNA ligase clustered with Ku protein, LigD
> mih:BJP65_15745(831)12931.8173(70)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psu:Psesu_1418(932)17029.4173
17-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmh:VO01_09615(836)16431.1172()13-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kcr:Kcr_0736(117)13030.8172
0--    ATP-dependent DNA ligase, N-terminal domain protein
> span:AWL63_03665(816)14730.6172
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> led:BBK82_36775(480)16628.3171
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mbak:MSBR3_2416(151)13929.5171
0--    ATP-dependent DNA ligase
> mby:MSBRM_2391(151)13928.8171
0--    ATP-dependent DNA ligase
> nno:NONO_c07420(763)15726.1171
12-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xce:Xcel_2233(858)15829.1171(61)37-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mhaz:BHR79_09895(152)14029.3170
0--    3'-phosphoesterase
> nfa:NFA_6770(808)16426.8170
0-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nfr:ERS450000_03433(807)16426.8170(69)0-- K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppk:U875_20495(844)14533.1170()3-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppno:DA70_13185(876)14533.1170()3-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> prb:X636_13680(844)14533.1170()3-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brl:BZG35_02475(864)14929.5169
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psl:Psta_2104(135)13531.1169
0--    putative ATP-dependent DNA ligase
> amx:AM2010_2477(849)14627.4168
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> min:Minf_2347(133)13730.7168(66)0--    cdc9; ATP-dependent DNA ligase
> rhw:BFN03_13610(767)15828.5168()0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gor:KTR9_4500(793)15726.8167
6-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> papi:SG18_11950(831)14532.4167()2-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spav:Spa2297_01920(215)16229.0167(55)0--    3'-phosphoesterase
> mcw:A8L33_11835(809)16129.8166
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ndv:NDEV_1296(148)13029.2166
0--    Putative ATP-dependent DNA ligase
> aay:WYH_02746(840)14728.6165
1-- K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> alu:BB31_07905(485)15628.8165(55)12-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aol:S58_17960(909)14729.9165
4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cva:CVAR_1338(442)12030.8165
2-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gta:BCM27_23555(791)15726.8164
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stek:AXG53_00405(845)17029.4164
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ido:I598_0187(857)16128.6163
0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcon:B0A89_10545(824)16529.7163(62)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sesp:BN6_42910(492)12628.6163(51)23-- K01971  ligD putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_5275(355)16128.0162(51)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5213(355)16128.0162(51)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26870(355)16128.0162(51)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5213(355)16128.0162(51)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aoi:AORI_4401(491)16429.3162
10-- K01971  ligD lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brg:A4249_10585(853)15527.1162(41)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvc:CEP68_04590(853)15527.1162
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cwo:Cwoe_4716(815)16429.3162(6)14-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppnm:LV28_17515(876)14533.1162()1-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> splm:BXU08_12640(819)14729.3162(53)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbw:BDW_07900(797)15627.6161
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccx:COCOR_00956(852)14628.8161
7--    ligD; ATP dependent DNA ligase
> nsl:BOX37_03275(755)13927.3161(46)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pns:A9D12_07005(838)16528.5161
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> efv:CHH26_13895(840)14729.3160
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmac:MSMAC_2453(121)13525.9160
0--    ATP-dependent DNA ligase
> mmet:MCMEM_1297(133)12729.1160
0--    ATP-dependent DNA ligase clustered with Ku protein, LigD
> mmh:Mmah_0746(152)14028.6160
0--    DNA ligase D, 3'-phosphoesterase domain protein
> aja:AJAP_16790(478)16328.8159
9-- K01971  ligD Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_4914(352)12528.8159(51)7-- K01971  ligD lig; DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ase:ACPL_1154(348)15627.6159
14-- K01971  ligD ligD; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vma:VAB18032_10310(348)16628.9159(58)6-- K01971  ligD DNA ligase D, 3'-phosphoesterase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aaa:Acav_2693(936)14627.4158
28-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)14627.4158
85-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mox:DAMO_2474(170)16428.7158
0--    conserved protein of unknown function
> rta:Rta_07780(819)14530.3158
29-- K01971  ligD ATP-dependent DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axy:AXYL_06730(840)14527.6157()1-- K01971  ligD ligD2; DNA ligase D 2; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> boh:AKI39_06670(873)14528.3157()0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfi:Celf_0800(491)15927.0157(54)13-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...