GFIT result for T01407

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ipa:Isop_0204
(159 a.a.)
 
--
 
    [tr:E8QWB4_ISOPI] hypothetical protein
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pbs:Plabr_0882(147)14841.2310
0--     [tr:F0SIB6_RUBBR] ATP-dependent DNA ligase
> saci:Sinac_6085(122)13738.7280
0--     [tr:L0DMY7_SINAD] hypothetical protein
> pdx:Psed_3272(661)16832.7209(99)49-- K01971  ligD  [tr:F4CVX7_PSEUX] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tid:Thein_0269(122)12931.8205
0--     [tr:F8A9V5_THEID] DNA ligase D, 3'-phosphoesterase domain-containing protein
> ncy:NOCYR_0694(786)12631.0200
8-- K01971  ligD  [tr:H6QYV3_NOCCG] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfg:AB870_14550(837)16132.9197()0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mts:MTES_3162(825)15131.8190(89)13-- K01971  ligD  [tr:E8NC83_MICTS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mek:MSKOL_2512(151)13930.9188
0--     [tr:A0A0E3QDP1_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> mvc:MSVAZ_2500(151)13930.9188
0--     [tr:A0A0E3Q788_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> nbr:O3I_003805(771)13829.0188
10-- K01971  ligD  [tr:K0EP06_9NOCA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mac:MA3428(156)13928.1187
0--     [tr:Q8TKH7_METAC] hypothetical protein
> cai:Caci_5248(495)16529.7185(82)9-- K01971  ligD  [tr:C7Q6S2_CATAD] DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mef:MSWH1_1559(152)13929.5183
0--     [tr:A0A0E3NQF6_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> meq:MSWHS_1751(152)13929.5183
0--     [tr:A0A0E3NKE0_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> bcv:Bcav_0653(816)16128.0182(80)9-- K01971  ligD  [tr:C5BY21_BEUC1] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cna:AB433_09865(843)16426.8182(76)2-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msj:MSSAC_2457(156)13928.1180
0--     [tr:A0A0E3PQZ9_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> msw:MSSIT_2088(156)13928.1180
0--     [tr:A0A0E3P4U1_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> msz:MSSIH_2048(156)13928.1180
0--     [tr:A0A0E3PEP3_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> mbar:MSBR2_2357(151)13929.5177
0--     [tr:A0A0E3R5N8_METBA] ATP-dependent DNA ligase (EC:6.5.1.1)
> cmc:CMN_02036(834)16431.1176(76)9-- K01971  ligD  [tr:M5BA09_9MICO] ligD; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mba:Mbar_A2115(151)13927.3176
1--     [tr:Q46AP6_METBF] hypothetical protein
> mbw:MSBRW_2627(151)13927.3176
1--     [tr:A0A0E3QP27_METBA] ATP-dependent DNA ligase (EC:6.5.1.1)
> mma:MM_0209(152)13926.6175
0--     [tr:Q8Q0C8_METMA] hypothetical protein
> mau:Micau_1144(344)15328.1174(56)14-- K01971  ligD  [tr:D9TD68_MICAI] DNA ligase D, 3'-phosphoesterase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mls:MSLAZ_1794(151)13929.5174
0--     [tr:A0A0E3WSN7_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> metm:MSMTP_1128(152)14127.0173
0--     [tr:A0A0E3NXW0_9EURY] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1)
> psu:Psesu_1418(932)17029.4173
17-- K01971  ligD  [tr:E6WT36_PSEUU] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmh:VO01_09615(836)16431.1172()13-- K01971  ligD  [tr:A0A0D5CI80_9MICO] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kcr:Kcr_0736(117)13030.8172
0--     [tr:B1L4V6_KORCO] ATP-dependent DNA ligase
> mby:MSBRM_2391(151)13928.8171
0--     [tr:A0A0E3QVE8_METBA] ATP-dependent DNA ligase (EC:6.5.1.1)
> nno:NONO_c07420(763)15726.1171
12-- K01971  ligD  [tr:W5T891_9NOCA] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xce:Xcel_2233(858)15829.1171(61)37-- K01971  ligD  [tr:D1BV12_XYLCX] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nfa:nfa6770(808)16426.8170
10-- K01971  ligD  [tr:Q5Z219_NOCFA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppk:U875_20495(876)14533.1170()3-- K01971  ligD  [tr:V5PVU4_9BURK] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppno:DA70_13185(876)14533.1170()3-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> prb:X636_13680(844)14533.1170()3-- K01971  ligD  [tr:V5UGL4_9BURK] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psl:Psta_2104(135)13531.1169
0--     [tr:D2R1Q9_PIRSD] ATP-dependent DNA ligase
> amx:AM2010_2477(849)14627.4168
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> min:Minf_2347(133)13730.7168(66)0--     [tr:B3E0H2_METI4] cdc9; ATP-dependent DNA ligase
> gor:KTR9_4500(793)15726.8167
6-- K01971  ligD  [tr:J9SQC7_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> papi:SG18_11950(831)14532.4167()2-- K01971  ligD  [tr:A0A0B5FC52_9BURK] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aay:WYH_02746(840)14728.6165
1-- K01971  ligD  [tr:A0A0F7KX49_9SPHN] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> alu:BB31_07905(485)15628.8165(55)12-- K01971  ligD  [tr:A0A093BBH2_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aol:S58_17960(909)14729.9165
4-- K01971  ligD  [tr:M4Z390_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cva:CVAR_1338(442)12030.8165
2-- K01971  ligD  [tr:G0HCE1_CORVD] ligD; DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sesp:BN6_42910(492)12628.6163(51)23-- K01971  ligD  [tr:K0K408_SACES] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_5275(355)16128.0162(51)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5213(355)16128.0162(51)10-- K01971  ligD  [tr:G0FTG4_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26870(355)16128.0162(51)9-- K01971  ligD  [tr:G0FTG4_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5213(355)16128.0162(51)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aoi:AORI_4401(491)16429.3162
10-- K01971  ligD  [tr:R4T3J9_AMYOR] lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cwo:Cwoe_4716(815)16429.3162(6)14-- K01971  ligD  [tr:D3FA34_CONWI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppnm:LV28_17515(844)14533.1162()1-- K01971  ligD  [tr:A0A097NBD2_9BURK] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbw:BDW_07900(797)15627.6161
0-- K01971  ligD  [tr:W5X6K7_BDEBC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccx:COCOR_00956(852)14628.8161
7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> mmet:MCMEM_1297(133)12729.1160
0--     [tr:A0A0E3WZU5_METMT] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1)
> mmh:Mmah_0746(152)14028.6160
0--     [tr:D5EAR9_METMS] DNA ligase D, 3'-phosphoesterase domain protein
> aja:AJAP_16790(478)16328.8159
9-- K01971  ligD  [tr:A0A075UV23_9PSEU] Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_4914(352)12528.8159(51)7-- K01971  ligD  [tr:A0A076N1L0_AMYME] lig; DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ase:ACPL_1154(348)15627.6159
14-- K01971  ligD  [tr:G8RZ48_ACTS5] ligD; DNA ligase (ATP) (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vma:VAB18032_10310(348)16628.9159(58)6-- K01971  ligD  [tr:F4F7C2_VERMA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aaa:Acav_2693(936)14627.4158
28-- K01971  ligD  [tr:F0Q2F4_ACIAP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)14627.4158
85-- K01971  ligD  [tr:A1TQ54_ACIAC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mox:DAMO_2474(170)16428.7158
0--     [tr:D5MJG2_9BACT] hypothetical protein
> rta:Rta_07780(819)14530.3158
29-- K01971  ligD  [tr:F5XXQ6_RAMTT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axy:AXYL_06730(840)14527.6157()1-- K01971  ligD  [tr:E3HY60_ACHXA] ligD2; DNA ligase D 2 (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfi:Celf_0800(491)15927.0157(54)13-- K01971  ligD  [tr:F4H018_CELFA] DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll9625(883)14930.9157(54)13-- K01971  ligD  [tr:Q98P39_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tpr:Tpau_0201(778)16128.0157(57)7-- K01971  ligD  [tr:D5UQM2_TSUPD] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0935(789)16230.2156
292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpi:Mpet_2691(142)13225.8156
0--     [tr:E1RGC0_METP4] hypothetical protein
> xsa:SB85_13470(879)17428.2156
11-- K01971  ligD  [tr:A0A0A8E381_9XANT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpy:Y013_20910(802)15925.8155(44)5-- K01971  ligD  [tr:V9XKL3_9NOCA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ote:Oter_4309(603)15827.8154
5-- K01971  ligD  [tr:B1ZP92_OPITP] DNA polymerase LigD ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rge:RGE_26430(851)14732.0154
14-- K01971  ligD  [tr:I0HSJ5_RUBGI] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> roa:Pd630_LPD01566(759)15925.8154(46)12-- K01971  ligD  [tr:W8GXY1_RHOOP] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)16129.8154
5-- K01971  ligD  [tr:D8NY76_RALSL] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphi:TS85_18230(810)14727.2154
3-- K01971  ligD  [tr:A0A0C5LJ70_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cuv:CUREI_04560(758)16229.6153()0-- K01971  ligD  [tr:A0A077HJK5_9CORY] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdt:HYPDE_32328(578)15230.9153
0-- K01971  ligD  [tr:N0B3Q2_9RHIZ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hni:W911_06870(540)14729.9153
1-- K01971  ligD  [tr:V5SB92_9RHIZ] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rha:RHA1_ro05048(766)15925.8153
12-- K01971  ligD  [tr:Q0S6K7_RHOJR] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0884(726)16229.6151
346-- K01971  ligD  [tr:Q2IPD0_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0932(737)16229.6151
245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmi:CMM_2074(832)15930.2151()10-- K01971  ligD  [tr:A5CSR6_CLAM3] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asd:AS9A_4180(750)17527.4150(29)6-- K01971  ligD  [tr:F6EK72_AMYSD] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgy:CGLY_08870(429)14728.6150
0-- K01971  ligD  [tr:X5DSE8_9CORY] Putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gpo:GPOL_c05170(812)15825.3150(44)5-- K01971  ligD  [tr:H6MUZ9_GORPV] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rop:ROP_51120(758)15925.2150(42)9-- K01971  ligD  [tr:C1ATU5_RHOOB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsh:Rsph17029_1337(868)14729.3150
6-- K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsk:RSKD131_0994(877)14729.3150
10-- K01971  ligD  [tr:B9KRR2_RHOSK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsp:RSP_2679(868)14729.3150
8-- K01971  ligD  [tr:Q3J300_RHOS4] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmo:TMO_a0311(812)17030.0148
18-- K01971  ligD  [tr:I3TSH6_TISMK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nwi:Nwi_0353(913)14630.1146
3-- K01971  ligD  [tr:Q3SVS1_NITWN] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plm:Plim_1179(162)12634.1146
0--     [tr:D5SU29_PLAL2] hypothetical protein
> hdn:Hden_1070(562)15230.3143
0-- K01971  ligD  [tr:D8JV68_HYPDA] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kse:Ksed_19790(878)11830.5142(37)9-- K01971  ligD  [tr:C7NKD9_KYTSD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7843(239)15031.3136
1--     [tr:Q01NN1_SOLUE] ATP dependent DNA ligase
> bgu:KS03_2023(905)14630.8134(32)81-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...