GFIT result for T00532

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

lpc:LPC_1974
(296 a.a.)
 
--
 
K01971  ligD  hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> lpa:lpa_03649(296)296100.01952
0<> K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llo:LLO_1004(293)29154.61132
0-- K01971  ligD  [tr:D3HR29_LEGLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lok:Loa_02404(225)20857.2839(228)1-- K01971  ligD  [tr:W0BGV8_9GAMM] putative eukaryotic-type DNA primase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fsi:Flexsi_0431(291)27541.5802
0-- K01971  ligD  [tr:F8E8Z5_FLESM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2125(295)28540.7789
0-- K01971  ligD  [tr:D1Z0H5_METPS] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1966(298)27341.0781
0-- K01971  ligD  [tr:Q0W3B3_METAR] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)28739.0770
0-- K01971  ligD  [tr:A0A0S2TFP3_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlt:VC82_553(323)27640.2768
0-- K01971  ligD  [tr:A0A0D5YPS4_9FLAO] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_167(313)30239.1729
0-- K01971  ligD  [tr:V6DGX3_9DELT] ykoU; Eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)28238.7716(248)1-- K01971  ligD  [tr:A5ETW7_BRASB] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_0115(337)27739.7708
0-- K01971  ligD  [tr:A0A0F7CTE9_9CHLR] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_30635(309)29139.9698(231)5-- K01971  ligD  [tr:A0A0B5I658_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_10695(301)28536.8681(191)0-- K01971  ligD  [tr:A0A0U3P0H3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_29170(308)27938.0677(183)0-- K01971  ligD  [tr:A0A0U3RG51_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1305(361)27238.6668(162)2-- K01971  ligD  [tr:A0A0D4DGP5_9ACTN] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)29236.6667(151)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)28239.4665
1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_03038(295)27737.5662(155)4-- K01971  ligD  [tr:L0IW75_9MYCO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_0608(309)28636.4660(186)9-- K01971  ligD  [tr:F2R8H7_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dor:Desor_2615(813)28535.8659
0-- K01971  ligD  [tr:G7W6F7_DESOD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)27338.5659(168)9-- K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)27338.5659(168)9-- K01971  ligD  [tr:M4MX75_SINM2] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_15190(865)27338.5659(166)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_02600(865)27338.5659(168)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)27338.5659(166)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)27338.5659(166)7-- K01971  ligD  [tr:A0A0E0UFQ3_SINMB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_chr2907(865)27338.5659(166)14-- K01971  ligD  [tr:F7X888_SINMM] probabable ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)28638.1658
82-- K01971  ligD  [tr:A9GRV1_SORC5] unnamed protein product; High confidence in function and specificity (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4Chr2868(865)27338.8657(164)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_27360(308)28534.7655(157)4-- K01971  ligD  [tr:A0A089XJS0_STRGA] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccel:CCDG5_0620(826)28437.3651
0-- K01971  ligD  [tr:A0A078KJE6_9FIRM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_17401(329)27737.5651(183)24-- K01971  ligD  [tr:C9ZET8_STRSW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rti:DC20_13500(303)27233.8648
0-- K01971  ligD  [tr:A0A0P0CYM1_9BACT] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)29035.5648(134)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)27537.1647(39)9-- K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)29536.6646(19)47-- K01971  ligD  [tr:S4Y1N2_SORCE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)27936.9645
1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)28735.5645
10-- K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_3394(292)27537.8644(146)3--     [tr:A4FF44_SACEN] ATP-dependent DNA ligase (EC:6.5.1.1)
> sgy:Sgly_0962(813)28535.8642
0-- K01971  ligD  [tr:F0T2I5_SYNGF] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_5203(287)27536.4641(145)11-- K01971  ligD  [tr:A0A0H3D8J2_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5141(287)27536.4641(145)11-- K01971  ligD  [tr:G0FQR0_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26505(287)27536.4641(145)11-- K01971  ligD  [tr:G0FQR0_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5141(287)27536.4641(145)11-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mit:OCO_29900(296)27335.5640(157)3-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_2814(837)28537.2640(198)12-- K01971  ligD  [tr:W6RDU4_9RHIZ] ligD; DNA ligase (ATP) (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_3038(301)28933.2638(151)3-- K01971  ligD  [tr:F5Z238_MYCSD] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_6707(304)27537.1637(198)8-- K01971  ligD  [tr:A0A0B5EW78_STRA4] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)28336.0636(130)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_06735(291)28637.1636(168)1-- K01971  ligD  [tr:W0IPK4_RHILT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_29120(296)27635.5635(153)3-- K01971  ligD  [tr:S4ZH15_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swi:Swit_5282(658)24939.0634(23)3-- K01971  ligD  [tr:A5VGH4_SPHWW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14155(296)27335.5633(150)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_30560(296)27335.5633(151)4-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_14835(296)27335.5633(151)3-- K01971  ligD  [tr:I2AF58_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbh:AAW51_3125(873)29436.1632
0-- K01971  ligD  [tr:A0A0G3BR42_9BURK] ligD; bifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_05935(319)28635.0632(154)6-- K01971  ligD  [tr:A0A076LZN4_STRLI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmc:LMI_2571(822)28237.2632
0-- K01971  ligD  [tr:A0A098GIL1_TATMI] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chy:CHY_0025(293)28035.4631(142)1-- K01971  ligD  [tr:Q3AG37_CARHZ] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_6783(292)28536.1631(176)2-- K01971  ligD  [tr:C6B6W4_RHILS] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PA00165(292)28736.6630(165)1-- K01971  ligD  [tr:A0A0A8GMA8_RHIET] DNA polymerase LigD domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dai:Desaci_2451(813)28634.3629
2-- K01971  ligD  [tr:I4D6H7_DESAJ] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ddh:Desde_0514(812)28535.4629
0-- K01971  ligD  [tr:I4A4U0_DESDJ] ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hor:Hore_03410(313)27735.7629
0-- K01971  ligD  [tr:B8D1M5_HALOH] DNA polymerase LigD polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_6202(312)28935.3629(152)15-- K01971  ligD  [tr:A0A0K2B2C0_STRAM] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dhd:Dhaf_0568(818)29034.5628
0-- K01971  ligD  [tr:B8FUY8_DESHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dsy:DSY0616(818)29034.5628
0-- K01971  ligD  [tr:Q24ZY7_DESHY] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)28935.6628(99)6-- K01971  ligD  [tr:E8TFS2_MESCW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mia:OCU_29810(296)27335.5628(146)5-- K01971  ligD  [tr:H8IQK1_MYCIA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scn:Solca_1673(810)28235.5628
1-- K01971  ligD  [tr:H8KQK1_SOLCM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6498(319)28635.3628(150)10-- K01971  ligD  [tr:Q9ZC15_STRCO] SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_6912(306)27637.3627(157)0-- K01971  ligD  [tr:A0A0M5IV58_STRPR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbc:CbuK_0042(815)28435.2625
0-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbg:CbuG_0044(815)28435.2625
0-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbu:CBU_1934(815)28435.2625
0-- K01971  ligD  [tr:Q83AG5_COXBU] DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lha:LHA_0995(831)28137.7625
1-- K01971  ligD  [tr:A0A0A8URC6_LEGHA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_03070(292)28736.9625(163)2-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_02590(830)28436.6624(174)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buj:BurJV3_0025(824)27435.8624
6-- K01971  ligD  [tr:G0K266_STEMA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dmi:Desmer_2946(818)28634.6623
0-- K01971  ligD  [tr:J7IT26_DESMD] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)29035.2623(16)7-- K01971  ligD  [tr:C3MIG9_RHISN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sml:Smlt0053(828)27435.4623(106)6-- K01971  ligD  [tr:B2FU16_STRMK] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbgw:UT28_C0001G0604(308)28135.6620
0-- K01971  ligD  [tr:A0A0G4B481_9BACT] ATP-dependent DNA ligase, DNA ligase (ATP) (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PC00166(292)28736.2620(161)1-- K01971  ligD  [tr:A0A060IF22_RHIET] DNA polymerase LigD domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smz:SMD_0023(830)27934.1620(111)4-- K01971  ligD  [tr:A0A158SIV7_STEMA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)27836.3618
3-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpy:Cphy_1729(813)28633.9618
0-- K01971  ligD  [tr:A9KS69_CLOPH] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll4606(829)28934.9618(98)11-- K01971  ligD  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msc:BN69_1443(852)28536.5618
5-- K01971  ligD  [tr:J7Q463_METSZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)28432.7617
1-- K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_27575(303)28835.4617(126)7-- K01971  ligD  [tr:A0A0C5G7H9_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_09757(830)27836.3616(168)3-- K01971  ligD  [tr:F0LE72_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_3085(299)28834.0616(142)1-- K01971  ligD  [tr:C6W6G0_DYAFD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)27236.0616
0-- K01971  ligD  [tr:F6CIP8_DESK7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aay:WYH_02746(840)25440.2615
1-- K01971  ligD  [tr:A0A0F7KX49_9SPHN] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000163(292)28735.5615(26)3-- K01971  ligD  [tr:B3Q1F1_RHIE6] putative DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbs:COXBURSA331_A2135(815)28434.9614
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0416(308)28735.9614(1)1-- K01971  ligD  [tr:A0A0A8K1N9_9RHIZ] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gst:HW35_02605(609)28435.9613
0-- K01971  ligD  [tr:A0A077J3M5_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1301(301)27935.5613(53)1--     [tr:Q11IS8_CHESB] conserved hypothetical protein
... ... ...