GFIT result for T00656

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

lsp:Bsph_3075
(605 a.a.)
 
--
 
K01971  ligD  [tr:B1HPE2_LYSSC] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> lfu:HR49_10880(605)60592.93883
0<> K01971  ligD  [tr:A0A081TIW4_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lgy:T479_10330(605)60367.72903
0<> K01971  ligD  [tr:X2GST2_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> siv:SSIL_2188(613)60857.92536
0-> K01971  ligD  [tr:F2F5S8_SOLSS] DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baco:OXB_3302(607)60557.42441
0-- K01971  ligD  [tr:A0A0A8JMU5_BACSX] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacw:QR42_08520(610)60754.72273
0-> K01971  ligD  [tr:A0A0B4S8F3_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpu:BPUM_1666(621)60953.52240
0-> K01971  ligD  [tr:A8FDM8_BACP2] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpum:BW16_09190(621)60953.22201
0-> K01971  ligD  [tr:W8QWG2_BACPU] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpf:BpOF4_18445(578)57953.42133(1967)0-> K01971  ligD  [tr:D3FS95_BACPE] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bha:BH2209(611)60850.22125
0-> K01971  ligD  [tr:Q9KAS8_BACHD] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ble:BleG1_3934(601)60450.52067
0-> K01971  ligD  [tr:A0A060LZ04_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmet:BMMGA3_09875(609)60846.21951(1846)0-- K01971  ligD  [tr:I3E9F3_BACMT] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bif:N288_15905(612)60845.91946
0-> K01971  ligD  [tr:U5LC79_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gst:HW35_02605(609)60747.11941
0-> K01971  ligD  [tr:A0A077J3M5_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baci:B1NLA3E_13055(622)60546.91899
0-> K01971  ligD  [tr:N0AT41_9BACI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bag:Bcoa_3265(613)60446.41864
0-> K01971  ligD  [tr:G2TMD9_BACCO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bck:BCO26_1265(613)60446.01859
0-> K01971  ligD  [tr:F7Z7D1_BACC6] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcoa:BF29_289(613)60445.21810
0-> K01971  ligD  [tr:A0A0B5X848_BACCO] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcl:ABC1601(602)60946.51744(1484)1-> K01971  ligD  [tr:Q5WHL9_BACSK] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hhd:HBHAL_4934(589)60744.01743
0-> K01971  ligD  [tr:I0JSZ9_HALH3] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bae:BATR1942_04430(607)60842.11696
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> batr:TD68_03940(607)60842.11696
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bld:BLi01494(616)61042.61695(1395)1-> K01971  ligD  [tr:Q65KL9_BACLD] ykoU; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bli:BL03626(616)61042.61695(1395)1-> K01971  ligD  [tr:Q65KL9_BACLD] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blh:BaLi_c15730(616)61042.11678
0-> K01971  ligD  [tr:R9TTG2_BACLI] ykoU; ATP-dependent DNA ligase subunit YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baml:BAM5036_1253(611)60742.21670
0-> K01971  ligD ykoU; ATP-dependent DNA ligase subunit (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamt:AJ82_07560(611)60742.21665
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamy:V529_12680(611)60742.21665(1373)1-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamb:BAPNAU_2446(607)60742.21663(1365)1-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmp:NG74_01370(611)60742.21663
0-> K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bami:KSO_012785(611)60742.01662
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vir:X953_17615(598)60440.71662
1-> K01971  ligD  [tr:A0A075JXD0_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baq:BACAU_1295(607)60742.01660
0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> balm:BsLM_1418(607)60842.31658
0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamp:B938_06845(611)60742.01658
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacp:SB24_03120(611)60742.01654
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsr:I33_1508(607)60842.31654
0-> K01971  ligD ykoU; spore germination DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bst:GYO_1664(607)60842.41654
0-> K01971  ligD  [tr:G4NV71_BACPT] ykoU; spore germination DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamc:U471_13370(611)60741.81653
0-> K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bay:RBAM_013180(611)60741.81653
0-> K01971  ligD  [tr:A7Z3V5_BACA2] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamf:U722_07040(611)60741.81651
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsl:A7A1_1484(611)60842.41651
0-> K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bss:BSUW23_06875(611)60842.41651
0-> K01971  ligD  [tr:E0U2K3_BACPZ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bama:RBAU_1296(611)60742.01649(1349)1-> K01971  ligD  [tr:S6FJH1_BACAM] ykoU; ATP-dependent DNA ligase subunit (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bao:BAMF_1421(611)60742.51649(1362)1-> K01971  ligD  [tr:E1USF9_BACAS] ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baz:BAMTA208_10445(611)60742.51649(1339)1-> K01971  ligD ykoU; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bql:LL3_01440(611)60742.51649(1339)1-> K01971  ligD ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsn:BSn5_18735(611)60842.31649
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxh:BAXH7_02135(611)60742.51649(1339)1-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oih:OB3034(595)60241.51649
0-> K01971  ligD  [tr:Q8EM27_OCEIH] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamn:BASU_1275(611)60741.71648
0-> K01971  ligD ykoU; ATP-dependent DNA ligase subunit (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsus:Q433_07660(611)60842.31647
0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacl:BS34A_14860(611)60842.31645(1356)1-> K01971  ligD  [tr:A0A0A1S9H7_BACSP] ligD; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacy:QF06_05715(611)60842.31645
0-> K01971  ligD  [tr:A0A0C5CX88_9BACI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsh:BSU6051_13400(611)60842.31645(1356)1-> K01971  ligD ykoU; ATP-dependent DNA ligase subunit YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsq:B657_13400(611)60842.31645(1356)1-> K01971  ligD ykoU; ATP-dependent DNA ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsu:BSU13400(611)60842.31645(1356)1-> K01971  ligD  [sp:LIGD_BACSU] ligD; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsul:BSUA_01458(611)60842.31645(1356)1-> K01971  ligD ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsut:BSUB_01458(611)60842.31645(1356)1-> K01971  ligD ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsy:I653_06870(611)60842.31644
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjs:MY9_1468(612)60841.91642
0-> K01971  ligD  [tr:I0F3E9_9BACI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bacb:OY17_09685(611)60741.71639
0-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bqy:MUS_1417(611)60741.71639(1363)1-> K01971  ligD  [tr:I2C456_BACAM] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bya:BANAU_1254(607)60741.71639(1352)1-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsx:C663_1379(611)60842.11634
0-> K01971  ligD  [tr:M4KUB0_BACIU] ykoU; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bso:BSNT_02251(565)56141.91520
0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsp:U712_07000(565)56141.91516
0-> K01971  ligD putative ATP-dependent DNA ligase ykoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tap:GZ22_15030(594)60539.31514
0-> K01971  ligD  [tr:A0A075LNW8_9BACI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bco:Bcell_3194(413)40244.01172(790)0-- K01971  ligD  [tr:E6U0J1_BACCJ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)63432.0914(814)0-> K01971  ligD  [tr:F8KYR4_PARAV] DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmr:Cycma_1183(808)64531.5890(668)1-> K01971  ligD  [tr:G0IY51_CYCMS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)62529.9887(282)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)65828.9883
1-> K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asl:Aeqsu_3115(807)64329.9880
1-> K01971  ligD  [tr:I3YZY2_AEQSU] ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033620(298)28248.2875(570)0-- K01971  ligD  [tr:A0A075R759_BRELA] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)65130.1874
0-- K01971  ligD  [tr:W0EYS4_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbe:BBR47_36590(300)28246.8862(527)0-- K01971  ligD  [tr:C0ZFS7_BREBN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfo:GFO_0300(802)64329.5855(645)0-> K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)64930.0849
1-> K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sht:KO02_10895(829)61529.4832(597)1-> K01971  ligD  [tr:A0A088EYC0_9SPHI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_0365(902)67528.6827(216)2-- K01971  ligD  [tr:C6VYF5_DYAFD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)65327.4824(41)3-> K01971  ligD  [tr:C7PLF2_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)64628.9823(623)2-- K01971  ligD  [tr:Q6MA42_PARUW] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbal:M667_13175(808)62628.6813
1-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_01168(622)64828.7813(5)2-- K01971  ligD  [tr:C6X5D0_FLAB3] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)68729.5807(595)1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)67430.0802(384)15-- K01971  ligD  [tr:W0RSS2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cwo:Cwoe_4716(815)59730.3797(402)14-- K01971  ligD  [tr:D3FA34_CONWI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)66128.4789(547)1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lha:LHA_0995(831)62528.6785(548)1-- K01971  ligD  [tr:A0A0A8URC6_LEGHA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)63628.8781(668)1-> K01971  ligD  [tr:B9LYX5_GEODF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gym:GYMC10_5317(305)26243.5779(512)0-- K01971  ligD  [tr:D3EG05_GEOS4] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lok:Loa_02538(825)62227.0779(360)4-- K01971  ligD ligD; DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scn:Solca_1673(810)61328.5776(573)1-> K01971  ligD  [tr:H8KQK1_SOLCM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gem:GM21_0109(872)68327.4775
1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psn:Pedsa_1057(822)63327.2774(542)1-> K01971  ligD  [tr:F0SBI2_PEDSD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeh:H70357_05705(294)26544.2769(517)0-- K01971  ligD  [tr:A0A089HVZ3_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pri:PRIO_1233(294)26544.2762(485)0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)64027.5759(197)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)68526.7759
2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pste:PSTEL_06010(293)26543.0758(467)0-- K01971  ligD  [tr:A0A089LU17_9BACL] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...