GFIT result for T00727

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

min:Minf_2347
(133 a.a.)
 
--
 
    cdc9; ATP-dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> tid:Thein_0269(122)12060.0484
0--     [tr:F8A9V5_THEID] DNA ligase D, 3'-phosphoesterase domain-containing protein
> ave:Arcve_0194(121)11857.6482
0--     [tr:F2KNK4_ARCVS] DNA ligase D
> mbn:Mboo_2057(128)12253.3482
0--     [tr:A7IA10_METB6] hypothetical protein
> gor:KTR9_4500(793)11954.6472
6-- K01971  ligD  [tr:J9SQC7_9ACTO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mfo:Metfor_0961(128)11757.3468
0--     [tr:L0HDB4_METFS] DNA ligase D-like 3'-phosphoesterase domain-containing protein
> gpo:GPOL_c05170(812)11655.2461
5-- K01971  ligD  [tr:H6MUZ9_GORPV] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ast:Asulf_02035(122)11557.4460
0--     [tr:N0BEH0_9EURY] DNA ligase D, 3-phosphoesterase domain protein
> tye:THEYE_A0546(138)12658.7459
0--     [tr:B5YJH4_THEYD] ligD; DNA ligase D, 3'-phosphoesterase domain
> aja:AJAP_16790(478)13545.9455
9-- K01971  ligD  [tr:A0A075UV23_9PSEU] Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdx:Psed_3272(661)12050.8453(181)49-- K01971  ligD  [tr:F4CVX7_PSEUX] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_4914(352)13446.3452(152)7-- K01971  ligD  [tr:A0A076N1L0_AMYME] lig; DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> alu:BB31_07905(485)12050.0448
12-- K01971  ligD  [tr:A0A093BBH2_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aoi:AORI_4401(491)12049.2448
10-- K01971  ligD  [tr:R4T3J9_AMYOR] lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fri:FraEuI1c_4744(558)11756.4448
64-- K01971  ligD  [tr:E3IZG5_FRASU] DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfi:Celf_0800(491)12549.6446
13-- K01971  ligD  [tr:F4H018_CELFA] DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rha:RHA1_ro05048(766)11555.7445
12-- K01971  ligD  [tr:Q0S6K7_RHOJR] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cti:pRALTA_0093(845)12454.0444(9)4-- K01971  ligD  [tr:B2AJW4_CUPTR] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmet:MCMEM_1297(133)11855.9442
0--    ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1)
> req:REQ_10780(746)11552.2441
4-- K01971  ligD  [tr:E4WE24_RHOE1] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> reu:Reut_B4424(825)12551.2439(35)8-- K01971  ligD  [tr:Q46SV9_CUPPJ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbr:Gbro_4532(797)11652.6438
5-- K01971  ligD  [tr:D0L6V5_GORB4] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rav:AAT18_06535(753)11953.8438
0--    ATP-dependent DNA ligase (EC:6.5.1.1)
> sch:Sphch_2999(835)13948.9438
6-- K01971  ligD  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asd:AS9A_4180(750)12050.8437
6-- K01971  ligD  [tr:F6EK72_AMYSD] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcv:Bcav_0653(816)12049.2437
9-- K01971  ligD  [tr:C5BY21_BEUC1] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rop:ROP_51120(758)11553.9437
9-- K01971  ligD  [tr:C1ATU5_RHOOB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kcr:Kcr_0736(117)12056.7436
0--     [tr:B1L4V6_KORCO] ATP-dependent DNA ligase
> roa:Pd630_LPD01566(759)11553.9436
12-- K01971  ligD  [tr:W8GXY1_RHOOP] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xce:Xcel_2233(858)12356.1436
37-- K01971  ligD  [tr:D1BV12_XYLCX] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mau:Micau_1144(344)12350.4435
14-- K01971  ligD  [tr:D9TD68_MICAI] DNA ligase D, 3'-phosphoesterase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ncy:NOCYR_0694(786)11652.6435
8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpj:N234_37775(826)12752.0435(57)3-- K01971  ligD  [tr:U3R2K5_RALPI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhb:NY08_3398(756)11553.0434
6-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vap:Vapar_1660(847)12648.4434
9-- K01971  ligD  [tr:C5CTW0_VARPS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nar:Saro_1695(843)12851.6433
1-- K01971  ligD  [tr:Q2G7N8_NOVAD] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nml:Namu_0128(831)11850.8433
13-- K01971  ligD  [tr:C8XIX5_NAKMY] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rer:RER_45220(758)11553.0433(333)4-- K01971  ligD  [tr:C0ZMH2_RHOE4] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rey:O5Y_21290(760)11553.0433
4-- K01971  ligD  [tr:T1VT18_RHOER] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> reb:XU06_21400(758)11553.0431
3-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmu:Nmul_A1177(853)13946.0430
0-- K01971  ligD  [tr:Q2Y9U1_NITMU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)13751.1429
10-- K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cnc:CNE_BB1p08120(842)12548.8428(0)5-- K01971  ligD  [tr:F8GU22_CUPNN] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mev:Metev_0789(152)12055.0428
0--     [tr:D7E8L8_METEZ] DNA ligase D
> vpd:VAPA_1c17500(851)12647.6428
4-- K01971  ligD  [tr:T1X8H8_VARPD] putative DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tpr:Tpau_0201(778)11753.0427
7-- K01971  ligD  [tr:D5UQM2_TSUPD] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aaa:Acav_2693(936)12848.4426
28-- K01971  ligD  [tr:F0Q2F4_ACIAP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)12848.4426
85-- K01971  ligD  [tr:A1TQ54_ACIAC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> apo:Arcpr_1824(121)12354.5426
0--     [tr:D2RFH4_ARCPA] ATP-dependent DNA ligase
> mid:MIP_01544(755)11851.7426
6-- K01971  ligD  [tr:J9W7H7_9MYCO] DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_09380(755)11851.7426
7-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_04585(755)11851.7426
7-- K01971  ligD  [tr:I2A9C6_9MYCO] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_09450(755)11851.7426
8-- K01971  ligD  [tr:S4Z4Z1_9MYCO] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> iva:Isova_2011(853)12454.0425
5-- K01971  ligD  [tr:F6FPL5_ISOV2] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dhd:Dhaf_0568(818)13750.4424
0-- K01971  ligD  [tr:B8FUY8_DESHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dsy:DSY0616(818)13750.4424
0-- K01971  ligD  [tr:Q24ZY7_DESHY] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hya:HY04AAS1_0647(146)11953.8424
0--     [tr:B4U873_HYDS0] DNA ligase D, 3'-phosphoesterase domain-containing protein
> mav:MAV_1056(766)12250.0424
6-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mava:LA64_04705(766)12250.0424
4-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mavd:NF84_04590(766)12250.0424
4-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mavr:LA63_04695(766)12250.0424
5-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axy:AXYL_00438(842)12550.4423(25)3-- K01971  ligD  [tr:E3HUH3_ACHXA] ligD1; DNA ligase D 1 (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mao:MAP4_2980(764)11850.8423
6-- K01971  ligD ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mavi:RC58_14795(764)11850.8423
5-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mavu:RE97_14820(764)11850.8423
6-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpa:MAP0880(764)11850.8423
6-- K01971  ligD  [tr:Q742F5_MYCPA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nno:NONO_c07420(763)11649.1422(321)12-- K01971  ligD  [tr:W5T891_9NOCA] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpy:Y013_20910(802)11947.1422
5-- K01971  ligD  [tr:V9XKL3_9NOCA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)12850.0421(51)15-- K01971  ligD  [tr:W0RSS2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hho:HydHO_0636(146)11953.8421
0--     [tr:M1RCZ9_9AQUI] DNA ligase D, 3'-phosphoesterase domain protein
> hys:HydSN_0651(146)11953.8421
0--    DNA ligase D-like 3'-phosphoesterase domain-containing protein
> amd:AMED_5275(355)11946.2420(19)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5213(355)11946.2420(19)10-- K01971  ligD  [tr:G0FTG4_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26870(355)11946.2420(19)9-- K01971  ligD  [tr:G0FTG4_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5213(355)11946.2420(19)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbc:CbuK_0042(815)12650.8420
0-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbg:CbuG_0044(815)12650.8420
0-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ddh:Desde_0514(812)12652.4420
0-- K01971  ligD  [tr:I4A4U0_DESDJ] ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mek:MSKOL_2512(151)12752.8420
0--    ATP-dependent DNA ligase (EC:6.5.1.1)
> mmh:Mmah_0746(152)12852.3420
0--     [tr:D5EAR9_METMS] DNA ligase D, 3'-phosphoesterase domain protein
> mvc:MSVAZ_2500(151)12752.8420
0--    ATP-dependent DNA ligase (EC:6.5.1.1)
> sesp:BN6_42910(492)12147.9420
23-- K01971  ligD  [tr:K0K408_SACES] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axn:AX27061_4222(874)12550.4419
35-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axo:NH44784_059851(870)12550.4419
23-- K01971  ligD  [tr:R4XZE0_ALCXX] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1150(845)13349.6419
3-- K01971  ligD  [tr:Q11J79_CHESB] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axs:LH59_19425(868)12550.4418
19-- K01971  ligD  [tr:A0A089TW42_ALCXX] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)12550.4418
1-- K01971  ligD  [tr:A9HXI5_BORPD] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> metm:MSMTP_1128(152)12654.0418
0--    ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1)
> ajs:Ajs_2523(837)12648.4417
10-- K01971  ligD  [tr:A1W8V8_ACISJ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbs:COXBURSA331_A2135(815)12650.8417
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbu:CBU_1934(815)12650.8417
0-- K01971  ligD  [tr:Q83AG5_COXBU] DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> del:DelCs14_2489(875)12649.2417
10-- K01971  ligD  [tr:F6B0K4_DELSC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mbar:MSBR2_2357(151)12053.3417
0--    ATP-dependent DNA ligase (EC:6.5.1.1)
> mei:Msip34_2574(870)12849.2417
1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sjp:SJA_C1-12900(829)13645.6416
3-- K01971  ligD  [tr:D4Z0J2_SPHJU] lig; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbw:RR42_s3417(833)12449.2415
2-- K01971  ligD  [tr:A0A0C4YPL7_9BURK] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ske:Sked_13060(852)12850.0415
6-- K01971  ligD  [tr:D1BEG9_SANKS] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmo:TMO_a0311(812)13249.2415(314)18-- K01971  ligD  [tr:I3TSH6_TISMK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fal:FRAAL4382(581)12147.9414
122-- K01971  ligD  [tr:Q0RHK2_FRAAA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bue:BRPE67_ACDS15580(907)13949.6413
3-- K01971  ligD  [tr:A0A060P483_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)12849.2413
1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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