GFIT result for T01142

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

mpd:MCP_2126
(334 a.a.)
 
--
 
    putative ATP-dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> rci:RCIX1968(353)33257.21301(979)3<-    predicted ATP-dependent DNA ligase
> mmal:CKJ54_13680(332)32551.11166(627)0<-    ATP-dependent DNA ligase
> mie:LG41_14150(332)32551.71161(623)4<-    ATP-dependent DNA ligase
> mir:OCQ_30550(332)32551.71161(623)3<-    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)32551.71161(623)3<-    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)32551.71161(623)3<-    DNA polymerase LigD ligase subunit
> myo:OEM_29110(332)32550.81157(619)3<-    DNA polymerase LigD ligase subunit
> mia:OCU_29800(332)32551.41155(617)3<-    DNA polymerase LigD ligase subunit
> sen:SACE_5682(333)32251.91147(679)7--    DNA ligase, ATP-dependent
> mchi:AN480_15575(332)32550.81146(608)0<-    ATP-dependent DNA ligase
> tee:Tel_12770(335)33149.51142
0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_5204(314)31352.11120(618)6<-    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)31352.11120(618)6<-    lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)31352.11120(618)6<-    ATP-dependent DNA ligase
> amz:B737_5142(314)31352.11120(618)6<-    lig; ATP-dependent DNA ligase
> mao:MAP4_2518(332)32549.51101(541)3--    ATP-dependent DNA ligase
> mav:MAV_3148(332)32549.51101(539)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(332)32549.51101(543)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)32549.51101(543)2--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)32549.51101(541)3--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)32549.51101(543)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)32549.51101(541)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)32549.51101(541)0--    hypothetical protein
> pmad:BAY61_01235(306)30751.51081(447)0<>    ATP-dependent DNA ligase
> ngv:CDO52_22145(317)31350.51075(818)0<>    ATP-dependent DNA ligase
> bbt:BBta_7782(351)32547.41056(471)3<-    putative ATP-dependent DNA ligase
> spun:BFF78_39610(336)33348.91043(512)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_5554(334)33850.01038(716)5-> K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hbe:BEI_0347(334)33247.91026
0<> K01971  ligD ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lok:Loa_02405(334)33348.01010(283)1->    DNA polymerase LigD, ligase domain protein
> dpb:BABL1_gene_166(342)33544.21007(716)0<>    ATP-dependent DNA ligase
> svl:Strvi_5345(337)33746.91003(687)8--    DNA polymerase LigD, ligase domain protein
> sct:SCAT_5457(313)31249.0997(683)3--    ligD; DNA polymerase LigD, ligase domain
> scy:SCATT_54560(327)31249.0997(683)4--    DNA polymerase LigD ligase subunit
> blin:BLSMQ_1369(316)31446.5906(342)0<-    ATP-dependent DNA ligase
> fpsz:AMR72_01115(881)32144.2852(188)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)32542.2834(471)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)33342.0823(457)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)31742.0800
7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)32442.3796
0-- K01971  ligD putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)31742.3789(465)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)33741.8782(120)5-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)33041.8778(432)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_20745(315)31742.6777(23)7-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_42720(315)31742.6777(23)9--    hypothetical protein
> abac:LuPra_02363(284)31342.2775(29)0<- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbd:Tbd_2247(846)33342.3773(603)2-- K01971  ligD DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbm:CL52_09565(845)33140.8771(578)4-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)33341.1769
1-- K01971  ligD ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)33139.9769
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmc:LMI_2571(822)33336.9769
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axn:AX27061_4222(874)31541.9767(470)35-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axx:ERS451415_04244(874)31541.9767(470)0-- K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)32340.6767
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphn:BV902_20470(912)31942.9765(482)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> adt:APT56_19400(885)33240.7763(483)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axo:NH44784_059851(870)31541.6763(464)23-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfi:Celf_0800(491)33639.3762(435)13-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)33340.2757(525)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_08150(315)31243.6757(120)0--    DNA ligase
> gba:J421_4951(349)34239.8757(37)15-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> panr:A7J50_2741(824)33139.0755(542)0-- K01971  ligD Putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axs:LH59_19425(868)31541.3754(473)19-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ote:Oter_4309(603)33941.6754(391)5<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pol:Bpro_3003(882)33039.4753
2-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfu:CFU_1974(830)32939.8752
1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbw:BDW_07900(797)33439.8751
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:blr8031(316)31242.3751(142)8--    DNA ligase
> pfc:PflA506_2574(837)33039.4751(51)4-- K01971  ligD ligD_1; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)31640.2751(478)0-> K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)33340.8750
85-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eyy:EGYY_19050(833)31141.8750
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)31342.2750(426)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)32639.3749(524)4-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmed:Mame_02200(830)33839.9748
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)30940.5747(410)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)31941.1747
1-- K01971  ligD unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfs:PFLU_2911(838)32938.0747(546)3-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0832(684)33538.8746(389)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pch:EY04_14070(844)33139.0746(643)1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ptv:AA957_01010(825)33038.5746(547)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)33939.5745(554)1-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)33939.5745(554)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmu:Nmul_A1177(853)33139.6745
0-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aaa:Acav_2693(936)33340.5744
28-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)30940.1742(377)105-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbi:Tbis_2338(321)31241.0742(378)3-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vap:Vapar_1660(847)32338.1741(506)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)30941.1740(10)78-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_5252(333)31941.7740(1)9-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puf:UFO1_2618(326)32138.9740
0-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsa:AciPR4_1657(957)33239.8740(452)12-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcp:JM49_15955(841)33438.6739
1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)31842.1739(147)9-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4Chr2868(865)31842.1739(67)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)31842.1739(142)9-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_15190(865)31842.1739(69)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_02600(865)31842.1739(73)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)31842.1739(142)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)31842.1739(142)7-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...